Basic Information

Insect: Timema genevievae
Gene Symbol: stc
Assembly: GCA_902155825.1
Location: CABFWO010000370.1:175127-207422[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 7.4e+04 -4.2 1.6 15 19 369 373 368 373 0.81

2 15 0.069 2.6e+03 0.6 0.3 4 10 402 408 401 410 0.94

3 15 2.2e-07 0.0082 18.1 13.5 4 18 419 433 417 434 0.94

4 15 3.6e-06 0.14 14.2 11.8 1 18 470 487 470 488 0.96

5 15 2 7.4e+04 -4.3 1.4 9 13 494 498 493 499 0.72

6 15 2.4e-08 0.00088 21.2 14.9 1 18 528 545 528 546 0.97

7 15 0.0001 3.8 9.6 18.2 4 19 595 610 588 610 0.87

8 15 1.4 5.1e+04 -3.6 2.0 5 10 639 644 639 644 0.93

9 15 0.00053 20 7.3 8.1 1 11 650 660 650 661 0.97

10 15 2 7.4e+04 -4.2 0.7 4 10 665 671 665 671 0.82

11 15 1.4e-08 0.0005 22.0 16.1 1 19 677 695 677 695 0.98

12 15 1.2 4.3e+04 -3.4 0.7 6 10 724 728 723 729 0.79

13 15 2 7.4e+04 -5.7 3.7 10 12 742 744 739 752 0.50

14 15 2e-07 0.0073 18.3 11.8 1 16 788 803 788 814 0.87

15 15 9.1e-07 0.034 16.2 13.2 1 19 820 839 820 839 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	7.4e+04	-4.2	1.6	15	19	369	373	368	373	0.81
2	15	0.069	2.6e+03	0.6	0.3	4	10	402	408	401	410	0.94
3	15	2.2e-07	0.0082	18.1	13.5	4	18	419	433	417	434	0.94
4	15	3.6e-06	0.14	14.2	11.8	1	18	470	487	470	488	0.96
5	15	2	7.4e+04	-4.3	1.4	9	13	494	498	493	499	0.72
6	15	2.4e-08	0.00088	21.2	14.9	1	18	528	545	528	546	0.97
7	15	0.0001	3.8	9.6	18.2	4	19	595	610	588	610	0.87
8	15	1.4	5.1e+04	-3.6	2.0	5	10	639	644	639	644	0.93
9	15	0.00053	20	7.3	8.1	1	11	650	660	650	661	0.97
10	15	2	7.4e+04	-4.2	0.7	4	10	665	671	665	671	0.82
11	15	1.4e-08	0.0005	22.0	16.1	1	19	677	695	677	695	0.98
12	15	1.2	4.3e+04	-3.4	0.7	6	10	724	728	723	729	0.79
13	15	2	7.4e+04	-5.7	3.7	10	12	742	744	739	752	0.50
14	15	2e-07	0.0073	18.3	11.8	1	16	788	803	788	814	0.87
15	15	9.1e-07	0.034	16.2	13.2	1	19	820	839	820	839	0.95

Sequence Information

Coding Sequence: ATGGCAAACTGGAATAGGCCAAATTCGTATGATAGTGGAAGAAACCCAAACTACAACTTTCAATCAAGTGAATATTCCAGACGAAATCCACATCAGTATGGAGGGGTGTCTACAAATCTACCTTATTACTCTGCTCCAAACGAAGTGGGCGTGTCTACCCCCGTACAGAATACTCCTTTGTATGAAACTTCAGGAGCACCTGTTTTTAACACACCTATAGGTTATATAGATGCACATCAGTCCTTTCCATATTTTAACGATACAGCTGATGTAAGTGTTAATCTTCCTCAAAGGGAAGCTAATTTTGCTCTCGCAGCTTCATCATCTTTGACGGCAACAGCTGGAGAGTTTATACCGAGATCGACATCTGCGCTGCACTCAAGTAGTCGAAATTGTACGAAAAATTCTGTTTTACACGGTGGCCAAGATCAGCAGCAAACAAGACATTCTGACCAAGACTGGAGAAACAATCGGGTGTACAAAAATTCATTTACAGGCTATAATCGAGGCCAGGGTAACTTCGCAAGGGATGATCGAAACTCATCACAACCTAGGAGAACTAATATGGAAGATGCAAAAAGTCAAGATCGTAGCAGATTATTGGCTGAAGCTGCAGCATTTCTTATACCTAAACCCAATCAGGTCATGCCTGGAGCTAGTGTTTCTAATGAAAATGCCGGGTCTGTTGATACCAAGTCTCAAAATGATGCTGGAGCTACAAACCCTATGGCGAGAAGGAATTTCGACTCCCAACAAAGATcaggagaaaataataaaagaatctATACAAACCctaaatatcaaaacaatacAACTTATGGTAACTATCCTAAATCTGAAAACTTCTATCAGAATCCTAGAAGAAACACTAATAGTTCTGGCTACACGAAGCAACCACAGTATTACTCCCAGCAAGATGACGAGGCAAGTCAGAGGGAGCGCCTTGTTGAGCAGTTGACTAAAGGCACACTGGAGTGCTTGGTATGCTGTGATCGTGTTCGCCAACAAGATCCTGTGTGGAGCTGCGGGAATTGCTACCATGTGTTGCACCTTAAATGCATCAAGAAGTGGGCCAAGTCTTCCAAAGTTGAAACTGGATGGCGCTGCCCTGCCTGCCAGAATGTCACAGAGAAGGTCCCACAGCTGTATCGCTGTTTCTGCAGCAAGGCGATTGAGCCCCAGTGGAATAGACAAGATGTCCCACACACTTGTGGCGAGATGTGTGGCAAGACTCGTGACAAACCGGATTGTGTGCATCGTTGCACTCTTCTCTGCCATCCGGGACCATGCCCCCCTTGTGTTgctcaagtaaacagACAATGCGGCTGTGGTGCAACATCTAAAGTGGTGAAGTGTGGTGGAGACAAGCCACTACTTTGTGACGCTCTGTGTGGCAAGGAGCTAAACTGTAGTGTCCACAAGTGCACCAGGAAATGCCACATAGGAGAGTGCGGCAATTGTGAAGAAATTGTCATCCAAGCATGCCACTGTGGCAAAGAGTCTCGGAAGATTGCCTGCGACCTCACCTCAGTCGGGGTGACTAACTTCTCCTGTGGAGGAATTTGTGAGAAGCATCTGACATGTGGGAACCACCAGTGCACTGTAGTGTGTCACACTGGCCCCTGCGGAGAATGCGAGCTCTCCCCTGATAAGGTCACACACTGTCCTTGTGGTAAAACCGAGCTTACAGCAGACCAGGCCAGAAACAGCTGTTTGGATACCATTCCCAACTGTCCGCTCATCTGTGGCAAGAAGCTAGCTTGCGGTCAACCCAACAACCCCCACCATTGCAAAGAGGAGTGTCACAACGGCAAATGCCCTCCATGTCCATTAAGCACGCTTGTGAAGTGTCGCTGCGGCAATATGGACAGAGAAATCCCATGTATTGAGCTCACCACACGAGCTGATGATGCCAGGTGTGAGAAAAAATGCACCAAGaAACGTGCATGTGGCAAACATCGTTGTAACCAGCTGTGCTGCATTGACGTTGATCACGTATGCCCCATGGTTTGCAACCACATGTTGACCTGCGGGCAGCACCGCTGTGATGAGCCTTGCCACCGCGGACATTGCCGCCCCTGTTGGAGAACAAGTTTTGACGAGTTGTACTGCGAGTGCGGAGCAAGTGTGTTATACCCTCCAGTCCCCTGTGGCACGAGGCGTCCATCGTGCTCTAAGCCCTGCTCCAGACCCCACCCTTGTGAGCACCCACCGATCCACAACTGCCACAGCGAGCCGACTTGTCCACTGTGTACAGTGCTCACCCAGAAGTACTGCTATGGCAAGCATGAGCTTCGCAAGACCATTCCATGCCACCAGGCGGATTTCTCATGTGGTCTCCCCTGCAACAAGGACTTGTCTTGTGGCCGCCACCGCTGCATCTTGCCATGTCACAAGGGCCCCTGTCTGAAAGAAGGCCAGGCGTGTACACAGCCTTGCACCACCACAAGGAATCTCTGTGGACATAACTGTGCCAGTCCTTGCCACGATGGACCATGCCTTGACTCCCCTTGCAAAGAAATGGTAAAGGTGACATGCGAGTGTGGCCACAGATTTACTACTCGAGCCTGCTTTGACAACGTGAAGGAGTACCAGCGTATGGCAACATCACTGTTGGCTTCCAAGATGGCGGACATGCAGTTAGGACATTCTGTTGACATTGGTGACCTGCTTAGTAATCCAACCACTCGCAAAATGAGCCTTAAAACgctTGAGTGCAATGATGAGTGCAAATTGATAGAAAGAAATATACGAATGGCTATAGGGCTGCAGATTCGTAATCCTGATCTAAGCGCCAAATTGACGCCCCGCTATTCAGAGTTTATGCGACAGTGGGCAAAGAAAGACCCTAATTTATGTAACATGGTTCAAGAGAAGTTAACAGAACTAGTTCAGTTAGCCAAACAGTCGAAGCAAAAGAGTCGCAGCCACTCTTTTGATCCGATGAACCGAGACAAACGTCAGTTTGTTCATGAGTATTGTGAACATTTTGGATGCGAGTCCATGGCCTATGATCAGGAGCCCAAACGTAATGTCGTAGCTATAGCTACAAGAGACAAGGCTTGGCTTCCTAGCATGAGTTTGATGGAAGTTATTCAGCGAGAAAATGGCCAGCGGAAGATCCCTAAACCTGTTATTAATGCAAACAGATCCCCATCCCTCAGAGATAAATTGAGTTTCAATGGGATTTATTTAGCAGAAATATTCGGCGGCACAGGATTGTATAACATGGATGGGATACAAGCATGGATCTTTGTACCTGTGCATATTGCCAGGTCACAGCAGGCAGGGTGGACTACGAGATAA
Protein Sequence: MANWNRPNSYDSGRNPNYNFQSSEYSRRNPHQYGGVSTNLPYYSAPNEVGVSTPVQNTPLYETSGAPVFNTPIGYIDAHQSFPYFNDTADVSVNLPQREANFALAASSSLTATAGEFIPRSTSALHSSSRNCTKNSVLHGGQDQQQTRHSDQDWRNNRVYKNSFTGYNRGQGNFARDDRNSSQPRRTNMEDAKSQDRSRLLAEAAAFLIPKPNQVMPGASVSNENAGSVDTKSQNDAGATNPMARRNFDSQQRSGENNKRIYTNPKYQNNTTYGNYPKSENFYQNPRRNTNSSGYTKQPQYYSQQDDEASQRERLVEQLTKGTLECLVCCDRVRQQDPVWSCGNCYHVLHLKCIKKWAKSSKVETGWRCPACQNVTEKVPQLYRCFCSKAIEPQWNRQDVPHTCGEMCGKTRDKPDCVHRCTLLCHPGPCPPCVAQVNRQCGCGATSKVVKCGGDKPLLCDALCGKELNCSVHKCTRKCHIGECGNCEEIVIQACHCGKESRKIACDLTSVGVTNFSCGGICEKHLTCGNHQCTVVCHTGPCGECELSPDKVTHCPCGKTELTADQARNSCLDTIPNCPLICGKKLACGQPNNPHHCKEECHNGKCPPCPLSTLVKCRCGNMDREIPCIELTTRADDARCEKKCTKKRACGKHRCNQLCCIDVDHVCPMVCNHMLTCGQHRCDEPCHRGHCRPCWRTSFDELYCECGASVLYPPVPCGTRRPSCSKPCSRPHPCEHPPIHNCHSEPTCPLCTVLTQKYCYGKHELRKTIPCHQADFSCGLPCNKDLSCGRHRCILPCHKGPCLKEGQACTQPCTTTRNLCGHNCASPCHDGPCLDSPCKEMVKVTCECGHRFTTRACFDNVKEYQRMATSLLASKMADMQLGHSVDIGDLLSNPTTRKMSLKTLECNDECKLIERNIRMAIGLQIRNPDLSAKLTPRYSEFMRQWAKKDPNLCNMVQEKLTELVQLAKQSKQKSRSHSFDPMNRDKRQFVHEYCEHFGCESMAYDQEPKRNVVAIATRDKAWLPSMSLMEVIQRENGQRKIPKPVINANRSPSLRDKLSFNGIYLAEIFGGTGLYNMDGIQAWIFVPVHIARSQQAGWTTR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449158;
90% Identity: iTF_01449158;
80% Identity: -