Basic Information

Gene Symbol
-
Assembly
GCA_900474325.1
Location
UCOK01019079.1:100567-110013[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 7.9e-06 0.0009 20.1 1.0 1 23 413 435 413 435 0.98
2 29 0.032 3.7 8.7 1.4 1 23 458 481 458 481 0.96
3 29 3.4e-05 0.0039 18.1 0.5 2 23 488 510 487 510 0.97
4 29 0.00017 0.019 15.9 0.8 1 21 530 550 530 551 0.95
5 29 0.1 12 7.2 0.5 3 23 651 671 649 671 0.94
6 29 0.00018 0.02 15.9 0.9 1 23 677 700 677 700 0.96
7 29 0.00015 0.017 16.1 0.1 1 23 772 795 772 795 0.96
8 29 0.01 1.2 10.3 0.4 1 23 801 824 801 824 0.96
9 29 0.15 17 6.6 1.5 1 23 837 859 837 859 0.97
10 29 4.5e-05 0.0051 17.7 0.9 3 23 904 925 903 925 0.96
11 29 1 1.2e+02 4.0 0.7 2 23 988 1011 987 1011 0.92
12 29 3.9 4.5e+02 2.2 0.0 2 23 1020 1042 1020 1042 0.83
13 29 0.16 19 6.5 0.0 2 23 1049 1071 1048 1071 0.93
14 29 1.6e-05 0.0019 19.1 1.2 1 23 1079 1101 1079 1101 0.98
15 29 0.7 81 4.5 0.7 1 23 1133 1157 1133 1157 0.92
16 29 0.00026 0.03 15.3 3.3 1 23 1160 1183 1160 1183 0.97
17 29 0.0045 0.51 11.4 0.8 2 23 1190 1212 1189 1212 0.95
18 29 0.075 8.6 7.6 9.5 1 23 1239 1262 1239 1262 0.94
19 29 0.0034 0.39 11.8 1.8 2 23 1274 1295 1273 1296 0.93
20 29 0.47 54 5.1 1.1 1 23 1299 1322 1299 1322 0.94
21 29 0.0099 1.1 10.3 2.8 2 23 1329 1352 1328 1352 0.94
22 29 4.6 5.3e+02 1.9 0.0 2 23 1389 1411 1388 1411 0.87
23 29 0.28 33 5.8 2.7 2 23 1420 1442 1420 1442 0.96
24 29 0.48 55 5.0 1.0 2 23 1448 1470 1447 1470 0.93
25 29 0.014 1.6 9.9 0.3 1 21 1570 1590 1570 1591 0.96
26 29 0.4 46 5.3 1.9 2 23 1688 1710 1687 1710 0.94
27 29 0.4 46 5.3 0.3 2 23 1717 1739 1716 1739 0.94
28 29 0.38 44 5.4 1.8 1 23 1750 1772 1750 1772 0.97
29 29 0.011 1.2 10.2 0.4 3 19 1781 1797 1780 1799 0.94

Sequence Information

Coding Sequence
atggaattttttttcaaaagggACACCCGTTACATGGAATTGAAGACCTCGGAGGAGAAGCGAGTGGCCTTTATCTCCATAGTTCTGGGGCCGTGGCCAGGGCTTTCGGCTCGCCGGGTGCGGTTGATCGCCTGCTACGTGGAGACTCAGTGGTTGTCTCTCTTTGTCACTCCGTTGGAAGAGCTAGGGTCATCTGTCCTCTTCTTCTCGTCTCTGCCAGTGTCCATGTCCGGCCGTCTTGTCGCTCTTGTCTCGTGTCCTTTCCCCAGTTCCCCTCCTGCCTATCTTTCCTCTCCGTTCCTCGCTTGGGGATTGCCCCCTGGTCCCGAACGAACAACTCCAGACCACTGCTACCTCTACCCGGCTTCCTGCATGGCGATGGCATGGCGCATCCTCGTCGCGTTCAACCGACTCGAGGCACCAATACTATTGTCGACTCCACTCCTCTGTCCCCGTCTATGTTCAGATTTGCTTCATGCATCCAGCTCTTTTCATCCAGCGACCACTTCCATCCTCTCCAGTCTCCTCGCTTTCAGAGCCTTGAGAATTCAGCTCAGATTCTCCAATGGCAACGTCGCCTTGAGTCTCGCCTACCTGACGCTCTGCTGCCCGATTACCTGCTTGGCCTGGCTGCTTGATGTCCCGTCCCTTCTAAACTTtgaagttattaaaaatacgattTTCTTACTTGTGTTCCAGATAGCAGAAGATGATCGACTGCCAAAGTGTCTTTGCTATCGATGCATgtataatttggaaaatttttatgacttcAGAACAGCATGTGTAAATGCAGTTTCTGTTCTGGAAAACTTTTTGTCTCCAGATAAAAATgaaaatgatgAAGACAGAAGGAATTCTACAGAATATTGTTCAGAATTACGTTCGGAACTCCTCAAAGAGAAAGAACATATGCCAATACTCATTCCTGAAGCCCCCGTAGTGAATCCGAACGCAGCATTGGGGACACCACCAAGACTTAATTCTGATGGCGAAGCAGATAATTACATTGAGGAAATTTTGGAACAAAGTGGCACGGATGAAGCTGCGGATGATGCTGAAGATAGAAAGTCAGAGGAGTACGAGTTGGATATGGAAACGAATCCCAGTGACTTTTTGGAAATGCCACCAATGCTCACAGAAGATGCAGAAGAAAATGAGACAGCGAACGTTTCCGCACGAGCACGTGCACGAGATTCTAGAGGATTTCAGCACAAATCTGAACAGCACGAAGTTTATGTCTGCTCACTTTGTAACAAGGCCTTCAGTTCAAAAGGCCATTTGTCCCTTCACGCGAGAATACACGTCGGTGCAGGTGATGTCATCGGTGAAAAGGTTATCACTGACGATCACACTTCTTACAAAAGACCCTATCAATGCGACCTCTGCTACAAGGCTTACTCGACGGCTAAACATCGATGGGGTCACGTATCAACTAGTCATCGagGTCATCCTGCGGTTACATGCAGTTACTGTTCACGCATTTACTCCACAAGAGGAAACCTAGAAGAACACATCCGTTCCAGGCACGCCGGTTTGCCACTTCCGCCGGAAGTGCCAGTTCCCTACGTTCAACCAGAAAACAAATACCAGTGCAAGACTTGTCCCAAGATGTATACGAACACAACAGACCTCAATAAACACAGTCGAATCTGCACAGGAGGTCAGCAAAAAGAATTGCCAAATAATGACCCAACCTTAGAgaagttaaagaaaattcaagttgaGGCTTCAGATATGTCGAGTAACGACTCGACCAATGAGACTAAAGATTACAAGAACGCTGAGGCTAAACTTGCAAAAAATCCCCAGCTCACAATTCTTAAACAGGCGCTCACCAAAGGAGACATTTTGAAGAGAAGCTACGACGAAAAATACAAGACTAGTTCCAAAACCAAAAAGCAAGTAAAAATCGATAGTAATGATATTGATGTAAACAAGCGGTGGTTCTGTGAATCCTGCCCACAGAACTTTACCTCGTTCGACAGCTTCAAAGAACACGAACTTTTACACGAAACTGAAAAACCCTACTTTTGTTTATTATGCGAGAAAGATTTCACTCAAAAATCTTCCTTAAGTAATCATATTGTGACTATGCATGGCGTCGATCCACATCCTATCATCGACAGCGATAAGTGTTTAAAAAAGTCTGTTCTACTTCATGgatggaataaaaaattagagtCTACGAATGGAGAACCTAATCTGGTCATCAAAAAAGAGGAAGTTTCTTCACCTTATCCCGAAATATCTATAGAAAACGAAGAAGAACTGCCAAGTAACCAAGACAAGATTATCGAAATCGACACAGTCTTCGTTTGCGAAATCTGTACTCGAGATTTTAACGACAGAGCATCCTTGTGGCTTCATATCCGAGCCACCCATAAGGAATTCGCCGCCTTTGCTTGCGGAGTCTGTTTAAAAATCTGTTCGGATAACGCACAGCTACTCAACCATGTGAATATGTATCACGGAGGTTCCAAACTTCTCATGTCTGAGCAGAGGCGTTACAGCTGTACAATTTGCGGAAGACAGCACGATTCTCGAAAAAAGTTAATCACCCACGTTTCGATTCATAACGTGGATCCCAGTTACGATCCTGCGAGTTTCGTTCAACTCAACAGCAATTATTACAACGAGAATCTAAATAGCAACGAAGGCATTGAGCAGCCAGTTGATGGCGATGCCGAGGATGGAGAGAAAGTTGACTGTTACATCTGTTACAAATCATTTCCTAACGAAGATCATCTTATCAGGCATCAACGAAACGCTCACAAATCCGATCCAGCGGTAGTAATTGGAGAATCCACAGCGAATGGCAGTGGATCCGGGCCTAATGGAAATGGAAACAGAGCGCAATATCATTTATTCTACATCTGCGAACTTTGCGGCAATTCGCATCCCAGCAAATGGGAACGTTGGCTACACGTTTCTAGTATTCACGGAGACGATCCAGAAATCAAGTGTGAGAGGCCAGATTGTGCGAAGATTTTTGCGACAAAGACCCTCCGAAACGAACATGCTCAGCATCATTTAATGCAAGGTAGTTCGCCAAACACTTGTGAGATCTGCGGGAAATTGTGGGGAAGCCGAGTGGATTATTGGAAGCACGTAATGGGAGTCCACTCAGATACTGTTCCTTTAATCTGTGGAGTTTGCCTCAAAGTATTCCCTAATGTTCTTCAGTTAAGTGCTCACGTGAAGCAGAATCACTGGCCTTTAACAAATGGTGATTTTAGTTGTGATATTTGTGGCAGGCCTTATTCCAACAAGTCCAAAATGTCCAGGCACAGGAAGATTCATGGCCTCGATGGCGAGGGTCACGTGCTTCCAGATCCTAGTGAATACATCAACGATTCAGGAAGACTTGACAATGGAGAAGCTATGGAGGTTGATTTCAGTTGTGAAGTGTGTGGAGATTTGAAGTTCCTCACCCTAGAAGACCTCTGCAATCATCGACGAATTATTCACAACCTCTTCCCCTGTGATTTGTGTAACAAATGTTACGGCAGAACTTCGCACTTGTGGAAACATGTTAATCGGGTTCACAAGGGTCACAAGGACGTCACCTGTCGGTTCTGCAAGAAGACGAGCGCTTCAAGAGATCACTTAGCAGCCCATATTGCTAAAATTCATAGATACAAGTCTGATGTGAAAAACGATACAAGAGAACCTGTGAATTTCAGGGTCGCACCACCTGAAGAAGAGGCTCTTCACCATTGTGACAGATGCAAGAAGGACTTTTACAAACGGTATTTGCTTCGGCGTCACATGAAGGCATGTCATAAGTATCGAAAGGATCCTGGTGCTCTTTTGACTAGGTGTCGAGCTTGTGAAAGAATATTCAAGGATCGAGCGAGTCTTCAAAAACACATTGAGAATCATCACAGTAGTTACACTTGTCATTTGTGTAACGAAACGATAACTTCGAAGCTCGGGATCATGACTCATAATCGGATTAACCACATGGATCATCCAGATCTTACTTGCGAGCTCAGCCATTGTAAGAAGCTTTTCCGCACAAAGGAGGATCTTGAATCTCATAAAAAGGATCACAGGATTCACACAACACCGAATGTTTGTGATTTCTGCGGAGACACTGCcgaaaataaacttaaattgaaaatgcaTGTCTTGTCCTTGCATCGAAACGAAATCGGTGTTTCTTGTGGAGTCTGTCTTATTCCGATGAAAGACCCgaaggatttgaaaaaacaTGTGGAGGACACTCACGGAAGTATCCTTTCAAAACCAAATACTTGTCAGGTTTGTGGAAAGCAGTATGCATCGAAGTGGAAAGCCTTTGATCATACAAAGAAGTGCCATGGAAAGGTTTTTAAGACCTGCAAACAATGCTTGGCTGTGTTTATTACCGAAGAAAGTATGAGGAATCATTATGAACACGTCCACAATGTTCCAAAAGACCAACTAGCTACATTCGAATACCGACTCGAAATCGGACGCAAGCGTCACTACGATAACTTGGAAGTCGTAATGAAAGAAGAGCCTGAAGaattggaatttgatgagGAACCAACAGAGGATTATTCGAATGATTATAAGAAAAGAATATCTGATTCTGATGACTATGATGCTCGAGCTGATTTCTATCCAAGGATGAACATCGAGCAGGAGGAACAGATGCCaccttcgaaaaaaataaagctgGATTCGAAggctaaaaagaaattaaaagagcGACAAACCTACGAGTGCGAGAACTGCAAGGTACTATTTAATACCAAGACTCAATTTTGGAATCATATTAACCTTTGCCCAAAGCGAAATATTATTACCCAGGAGGAAGACATAAGTTTCCCAACCTCGATTCTTGAGGCGCAtttgaagaataataatttgattaaGAGAGAGGAACCTGAACAGGAACTTGACGAGAATAACTTAAACATTCCAGACTTCAATCTCTTTGAAGATATCAATATGCAGTTATCAGGTGAGAAACCAGttcaaaatctttcttttaaatcgtCCTCGACTAGTAATAAATGTTCGAGGAAGGATTCACGGAAGGTTTACGATGAATCTACAAACACCGAGTGTACTTGCGAAGTTTGTGGGAAGCAATGGCCGGCGAAGAAACACCTGTGGCAGCATTTGATACGTTTTCATCGAGCAGAGGCTGCTGTAACGTGCGGGGTTTGCCTGAAACTTTGCACAACTTATGATGACTTGGCTTATCATCTGAAAGCTGCTCACGAGGCTTTGCTATCTTGTGAGGGAAACAACTTTACTTGTAAGGTTTGCGGAAGGTACCATAATGCCAGGAGCAAATTGTTGTTGCATATGAGCATTCATATCAACTGCAAGAATAATCCCATGTGCAAGAAGTGCAAACGCAGCTTCGAGACGgaggaaaaattgaaagagcACGTTGGAAATTGCGAGGGAAGACAGTCGGGACTGGGAATCAGACATGATGCAGAAGATGTGAAGAATGATGACAACgatgaaaatgaagataatGATGAGAATGATGAGAAGGGAAGTTTTATTGGAGATGAGGGAGACGAGAGGGAAGATAAAGAAGGAAATTATGGATCGGGAGGAGAAAAGGGTTCTGATAATGAAGATAGCAGCTCGGATGATTCCGCAGATTCAGGAACGGATAGTTCCTCTACCTCGAGTGATGATGAAAATGagaatgaagaaaatgaagtACCAGCTGAATCAAGAACTACAAGTAGACTCGGGGAACTAAGTTGCACAAGTGATAGTGATGAAGACTCCGACTCGGAAGCCCTTGAGGATGCTGCTGAGATTAAATCTAATGTAAGGTGTGAAGATGATAGGGAAAATTTAGTGAACAAAGATGTAAAACTGGAAGGCATAGGAATTAAGTCCACTTTGGTGTTGTCCGAATCCGATACAAAAGATTCTACAGCATTTGGAGGGTTTGAGAACAAGCTGATGAAAATTGAAACGAATAATATGGATTATTCGGATGATGAAGGTCCTCCGGTTTTGAGTCCAATGATGCCGTTGTTACCACCACAAGAGGAAGATATGAATAGTCAGATGGATGAGATGAGTCATAAATTGAGTCCGATGGTCAATTTGGAAATAAAGATGGAGCAGGAAATGCAGGATTGTGATTTTGAAGATATGCAGATCAAGTACGAGAATGTGGAAAGCAAGAATCAAACAGAGAGTAAAAATTTAGAGGAGTCTGAAGATTCAGAGTCTGAGAGTGaggatgaaaataaaatgtgtaTCTATGAAGAAGCTGGGAATCGAGAGGTTAAACCAGAAGGCTCAAGTGCGATCAGTGATGATGAAGAAGATGTAGAAATGCAGGAAGAAATCAAGGAAGGGGAAACTGCAGAAGAGAAAGGAGCGGAAGTAGCTTCTGCAGAATCTGAAGAAGAAACTGAAAACGAGGAAATagaagaggaagaggaagaagaatcCGAAGATGAAAGTGAGCAGGTCCAAATTGCAAATCACGGTAGTCCCGCAACAATCGATCACTCAGAAACGCTTTCACAAGATCTTGATGGGGAAGCTTCAGATCAAGAAGAGGCTGAAGAAGGTGAAGAAGGTGAAGAGGAGGAAGATGAAGAAGTAGAAGAAGAGGAACCAGAAGAGAATTTCATAAATGAAAACGCTGAAGTTGAAGAGGAACTAGCCGAGAATAATTCTCTTGTAGAGGAAGAAGTCATAGGAGAAGAAAACTACGAAGATGAAGCAATGATGGACGAGGAAATGAACAACGAAGATCATTCCATGCAGAATTTGAATAAGACTATCCTCACTGTCGGGAAGGATTCTGAGGGTAATCCCATCTTGATTCGCGAAGTAGTAACTGAATATCCTTACCCGGACGAATACGATTGCGAATCTGAATATCCAAACGTTTCAAATGAACAAACTCCTCTTTTTAATGCCGACGAAAATCAAAGATTATCGGGAGAAAACTTTGGCTTAAATAGTGATAGCCTCGACCAAACCATGACTGAGCCAGAAGTACAGACGGTAGATGAATTAGATCATCACGAGGAGGTGGAGATCGATGAACAGGTCGAAGACAAAGCTGATAGTGATATCGAAGAGTCAAGAACGAGTGCCAAAAGTTAA
Protein Sequence
MEFFFKRDTRYMELKTSEEKRVAFISIVLGPWPGLSARRVRLIACYVETQWLSLFVTPLEELGSSVLFFSSLPVSMSGRLVALVSCPFPSSPPAYLSSPFLAWGLPPGPERTTPDHCYLYPASCMAMAWRILVAFNRLEAPILLSTPLLCPRLCSDLLHASSSFHPATTSILSSLLAFRALRIQLRFSNGNVALSLAYLTLCCPITCLAWLLDVPSLLNFEVIKNTIFLLVFQIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVSVLENFLSPDKNENDEDRRNSTEYCSELRSELLKEKEHMPILIPEAPVVNPNAALGTPPRLNSDGEADNYIEEILEQSGTDEAADDAEDRKSEEYELDMETNPSDFLEMPPMLTEDAEENETANVSARARARDSRGFQHKSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCYKAYSTAKHRWGHVSTSHRGHPAVTCSYCSRIYSTRGNLEEHIRSRHAGLPLPPEVPVPYVQPENKYQCKTCPKMYTNTTDLNKHSRICTGGQQKELPNNDPTLEKLKKIQVEASDMSSNDSTNETKDYKNAEAKLAKNPQLTILKQALTKGDILKRSYDEKYKTSSKTKKQVKIDSNDIDVNKRWFCESCPQNFTSFDSFKEHELLHETEKPYFCLLCEKDFTQKSSLSNHIVTMHGVDPHPIIDSDKCLKKSVLLHGWNKKLESTNGEPNLVIKKEEVSSPYPEISIENEEELPSNQDKIIEIDTVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPASFVQLNSNYYNENLNSNEGIEQPVDGDAEDGEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVVIGESTANGSGSGPNGNGNRAQYHLFYICELCGNSHPSKWERWLHVSSIHGDDPEIKCERPDCAKIFATKTLRNEHAQHHLMQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSAHVKQNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEGHVLPDPSEYINDSGRLDNGEAMEVDFSCEVCGDLKFLTLEDLCNHRRIIHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRFCKKTSASRDHLAAHIAKIHRYKSDVKNDTREPVNFRVAPPEEEALHHCDRCKKDFYKRYLLRRHMKACHKYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRINHMDHPDLTCELSHCKKLFRTKEDLESHKKDHRIHTTPNVCDFCGDTAENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDTHGSILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFITEESMRNHYEHVHNVPKDQLATFEYRLEIGRKRHYDNLEVVMKEEPEELEFDEEPTEDYSNDYKKRISDSDDYDARADFYPRMNIEQEEQMPPSKKIKLDSKAKKKLKERQTYECENCKVLFNTKTQFWNHINLCPKRNIITQEEDISFPTSILEAHLKNNNLIKREEPEQELDENNLNIPDFNLFEDINMQLSGEKPVQNLSFKSSSTSNKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYDDLAYHLKAAHEALLSCEGNNFTCKVCGRYHNARSKLLLHMSIHINCKNNPMCKKCKRSFETEEKLKEHVGNCEGRQSGLGIRHDAEDVKNDDNDENEDNDENDEKGSFIGDEGDEREDKEGNYGSGGEKGSDNEDSSSDDSADSGTDSSSTSSDDENENEENEVPAESRTTSRLGELSCTSDSDEDSDSEALEDAAEIKSNVRCEDDRENLVNKDVKLEGIGIKSTLVLSESDTKDSTAFGGFENKLMKIETNNMDYSDDEGPPVLSPMMPLLPPQEEDMNSQMDEMSHKLSPMVNLEIKMEQEMQDCDFEDMQIKYENVESKNQTESKNLEESEDSESESEDENKMCIYEEAGNREVKPEGSSAISDDEEDVEMQEEIKEGETAEEKGAEVASAESEEETENEEIEEEEEEESEDESEQVQIANHGSPATIDHSETLSQDLDGEASDQEEAEEGEEGEEEEDEEVEEEEPEENFINENAEVEEELAENNSLVEEEVIGEENYEDEAMMDEEMNNEDHSMQNLNKTILTVGKDSEGNPILIREVVTEYPYPDEYDCESEYPNVSNEQTPLFNADENQRLSGENFGLNSDSLDQTMTEPEVQTVDELDHHEEVEIDEQVEDKADSDIEESRTSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2