Slae005675.1
Basic Information
- Insect
- Synergus laeviventris
- Gene Symbol
- -
- Assembly
- GCA_032275145.1
- Location
- JAUESI010000010.1:3343858-3350649[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 6.8e-06 0.00092 20.3 1.0 1 23 165 187 165 187 0.98 2 28 0.028 3.8 8.9 1.4 1 23 210 233 210 233 0.96 3 28 3e-05 0.004 18.2 0.5 2 23 240 262 239 262 0.97 4 28 0.00015 0.02 16.1 0.8 1 21 282 302 282 303 0.95 5 28 0.13 18 6.7 0.4 3 23 403 423 401 423 0.93 6 28 0.00033 0.044 15.0 0.5 1 23 429 452 429 452 0.96 7 28 0.00013 0.017 16.2 0.1 1 23 524 547 524 547 0.96 8 28 0.0048 0.66 11.3 0.4 1 23 553 576 553 576 0.96 9 28 0.22 30 6.0 1.5 1 23 589 611 589 611 0.96 10 28 3.9e-05 0.0052 17.9 0.9 3 23 656 677 655 677 0.96 11 28 0.026 3.5 9.0 0.7 2 23 740 763 739 763 0.93 12 28 3.4 4.6e+02 2.3 0.0 2 23 772 794 772 794 0.84 13 28 0.21 28 6.1 0.1 2 23 801 823 800 823 0.93 14 28 1.4e-05 0.0019 19.3 1.2 1 23 831 853 831 853 0.98 15 28 1.3 1.8e+02 3.6 1.3 1 23 885 909 885 909 0.92 16 28 0.00023 0.031 15.5 3.3 1 23 912 935 912 935 0.97 17 28 0.0038 0.52 11.6 0.8 2 23 942 964 941 964 0.95 18 28 0.065 8.8 7.7 9.5 1 23 991 1014 991 1014 0.94 19 28 0.0029 0.4 12.0 1.8 2 23 1026 1047 1025 1048 0.93 20 28 0.24 33 5.9 0.9 1 23 1051 1074 1051 1074 0.94 21 28 0.017 2.3 9.6 1.9 2 23 1081 1104 1080 1104 0.90 22 28 4 5.4e+02 2.1 0.0 2 23 1141 1163 1140 1163 0.87 23 28 0.24 33 5.9 2.7 2 23 1172 1194 1172 1194 0.96 24 28 0.0027 0.37 12.1 0.5 1 21 1322 1342 1322 1343 0.96 25 28 0.35 47 5.4 1.9 2 23 1440 1462 1439 1462 0.94 26 28 0.35 47 5.4 0.3 2 23 1469 1491 1468 1491 0.94 27 28 0.33 45 5.5 1.8 1 23 1502 1524 1502 1524 0.97 28 28 0.0056 0.76 11.1 0.3 3 19 1533 1549 1532 1551 0.94
Sequence Information
- Coding Sequence
- ATgtataatttggaaaatttttacgaCTTCAGAACAGCATGTATTAATGCAGTCTCTGTTCTGGAAAGCTTTCTATCTGCAGATAACAATGAAAGTGATGGCGATAGAAGGAATCCTACAAAACATTATTCGGAATTACGTTTGGAACTCCTCAAAGAGAAAGAACATATGCCAATACTCATTCCTGAAGCCCCCGTAGTGAATCCGAACGCAGCATTGGGGACACCCCCAAGActtaattcagatggagaaGCAGATAATGATATCGATGAAGTTCTGGAACAAAATGGCATGGATGaagctGCAGATGATGCTGAAGACAGAAAGTCAGAGGAGTACGAGTTGGATATGGAAACGAATCCTAGTGACTTTTTGGAAATGCCACCAATGCTCACAGAAGATGTAGAAGAAAATGAGACAGTGAACGTTTCCGTACGAGCCCGTGCACGAGATTCTAGAGGATTTCAGCACAAATCTGAACAGCACGAAGTTTATGTTTGTTCACTCTGTAACAAAGCCTTCAGTTCAAAAGGCCATTTGTCCCTTCACGCGAGAATACACGTCGGTGCAGGTGATGTAATCGGTGAGAAGGTTATCACTGATGATCACACCTCTTACAAAAGGCCGTATCAATGCGACCTCTGTTACAAGGCTTACTCGACGGCTAAACATCGTTGGGGTCACGTATCAACTAGTCATCGagGTCACCCTGCGGTGACATGTAGCTACTGTTCACGCATTTACTCCACAAGAGGAAACCTAGAAGAACACATCCGTTCCAGGCATGCCGGTCTGCCACTTCCGCCGGAACTGCCAGTCCCCTACATTCAACCAGAAAACAAATACCAGTGCAAGACTTGTCCTAAGATGTATACGAACACAACAGACCTTAATAAACACAGTCGAATCTGCACAGGAGGCCAGCAAAAGGAATTGCCAAATAATGACCCAGCCATAGAgaagttaaagaaaattcaagttgaGGCTTCAGATATGTCGAGTAACGACTCGACCAACGAAACTAAAGATTATAAGAACGCCGAGGCTAAACTTGCAAAAAATCCTCAGCTCACAATTCTAAAACAGGCGCTCACCAAAGGAGACATCTTGAAGAGAAGCTACGACGAAAAATACAAGACTAGTTCCAAAACCAAAAAGCAAGCAAGAATTGATAGTAATAATACTGATGTACACAAGCGGTGGTTCTGTGAATCCTGCCCTCAGCAGTTCACCTCGTTTGACAGCTTTAAAGAGCACGAACTTGCACATGACACTGAGAAACcctatttttgtttattatgcGAGAAAGATTTCGCTCAAAAATCTTCCTTAAGTAACCATATTGTGACTATGCATGGTGTTGATCCCCATCCTATCGTCAACAGTGATAGGTGTTTAAAAAAGGTGCGTCTACCCGAAGTATGGAGTAAAAAATCAGAGTGTACGAACGGAATACCCAATCTAGCCATCCAACAAGAGGAAGCTTCTTCGCCTTATCCCGAAATATCTACAGAAAACGAAGAAGAGCAGCCAAGTAATCAAGAGAAAATTATCGAAATCGACACAGTCTTCGTTTGCGAAATTTGTACTCGAGATTTTAACGACAGAGCATCCTTGTGGCTTCACATTCGAGCCACCCATAAGGAATTCGCCGCCTTTGCTTGCGGAATCTGTTTGAAAATCTGTTCCGACAACGCCCAGCTGCTCAACCATGTGAATATGTATCACGGAGGATCAAAACTTCTCATGTCTGAGCAGAGGCGCTACAGCTGTACAATTTGCGGAAGACAGCACGATTCTCGAAAAAAGTTAGTCACCCATGTTTCGATTCACAACGTCGATCCTAGTTACGATCCTGCAAGTTTCGTTCAACTCAACAGCAATTATTACAACGAGAATCTAAATAGCAACGAAGGCATCGAGCAACCAGTCGATGGCGATGTCGAGGATGGAGAGAAAGTTGACTGCTACATCTGTTACAAATCATTCCCCAACGAAGATCACCTTATCAGGCATCAACGAAACGCTCACAAATCCGATCCAGCGGTAGTGCTTGGAGAATCCACAGCGAATGGCAGTGGAACCGGACCTAATGGAAATGGAAACAGAGCGCAGTATCATTTATTCTACATCTGCGAACTTTGCGGCAATTCGCATCCCAGCAAATGGGAACGTTGGCTACACGTTTCCAGTGTTCACGGAGACGATCATGAGATCAAATGCGAGAGGCCAGATTGCGGGAAAATATTCGCCACAAAAACTCTTCGCAACGAACACGCCCAGCATCATGCAATGCAAGGTAGTTCGCCAAACACTTGTGAGATCTGCGGAAAATTGTGGGGAAGTCGAGTGGATTATTGGAAGCACGTGATGGGAGTCCACTCAGACACTGTTCCCCTAATCTGTGGAGTTTGCCTCAAAGTATTCCCTAATGTTCTTCAGTTAAGTTCTCATGTAAAGCAAAAACACTGGCCATTAACAAACGGTGACTTTAGTTGTGATATTTGTGGCAGGCCTTATTCTAACAAGTCTAAAATGTCTAGACACAGGAAGATTCATGGCCTCGATGGCGAAGGTCACGTGCTTCCAGATCCTAGTGAATACATCAACGATTCAGGGAGACTTGACAATGGAGAAGCCATGGAGGTTGATTTCAGTTGTGAAATGTGTGGAGATTTGAAGTTCCTGAGCCTGGAAGATCTCTGTAATCATCGAAGAATTACGCACAACCTTTTCCCTTGTGATTTGTGTAACAAATGTTACGGAAGAACTTCTCACTTATGGAAACATGTTAATCGGGTTCACAAGGGTCACAAGGATGTCACCTGTCGCTTCTGCAAGAAGACGAGCGCTTCAAGAGATCACTTAGCAGCCCATATTGCTAAGATTCATAGATACAAGTCTGATGTGAAAAACGATACAAGAGAACCAGTGAACTTCAGGGTCGCTGCTCCTGAAGATGAGGTTCTTCACCATTGTGACAGATGCAAGAAGGATTTCTATAAACGGTATTTGCTTCGGCGTCACATGAAAGCTTGTCATAAGTATCGAAAGGATCCTGGCGCTCTTTTGACTAGGTGTAGAGCTTGTGAAAGGATATTCAAGGATCGAGCAAGTCTTCAAAAACACATTGAAAATCATCACAGTAAGTACACTTGTCATTTGTGTGATGAAACGATAACTTCAAAGCTGGGGATCATGACTCATAATCGGATTAATCACATGAATCATCCAGACCTTACATGTGCCCTCAGCCATTGCAAGAAACTTTTCCGCACAAAGGAGGATCTTGAATCTCATAAAATGGATCACATGATTCACTCAACACCGAATGTTTGTGATTTCTGCGGAGACACTGCcgaaaataaacttaaattgaaGATGCATGTCTTGTCGTTGCATCGAAACGAAATCGGTGTTTCTTGTGGAGTCTGTCTTATTCCGATGAAAGACccaaaggatttgaaaaaacatgTGGAAGATACTCACGGAAGTATTCTTTCAAAGCCAAATACTTGTCAGGTTTGTGGAAAGCAGTATGCATCGAAGTGGAAAGCTTTTGATCATACGAAGAAGTGCCATGGGAAGGTTTTTAAGACCTGCAAACAATGCCTGGCTGTGTTCATTACCGACGAAGGTATAAGAAATCATTATGAATGCGTTCATAACGTTTCAAAAGACCAGTTGTCTACTTTTGAATACCGCCTCGAAATCGGACGCAAACGTCATTACGATAACTTGGAAGTCATAATGAAAGAAGAGCCCGAGGAATTGGAATTCGACGAGGAACCAACAGAGGATTATTCGAATGATTATAAGAAAAGAATATCTGATTCTGATGACTATGATGCTCGAGCTGATTTCTATGCAAGGATGAATAACGAGCAGGAGGAACAGAATCCACCTTTGAAAAAGATGAAACTGGACTCAAAGgctaaaaagaaagtaaaagaacGACAAACCTATGAATGCGAGAATTGCAAGGTACAGTTTAACACTAAGACTCAATTCTGGAATCATATTAACCTTTGCCCGAGGCGGAATATGATTACCAAGGAGGAAGTTACAAGTTTACCAACGTCGATTCTCGAAGCACATTTGAAGAATAATAACCTGATTAAGAGAGAGGAACCTGAACAAGAACTTGACGAGAATAACTTAAACATTCCAGACTTCAATCTTTTTGAAGATATCAATATGCAGTTGTCAGGTCAGAAACcggttcaaaatatttcctttaaatcttcCTCGGGTAGCAATAAATGTTCAAGGAAGGATTCAAGAAAGGTTTACGATGAATCTACAAACACCGAGTGTACTTGCGAAGTTTGTGGGAAGCAGTGGCCGGCGAAGAAGCACCTGTGGCAGCATTTGATTCGCTTTCATCGAGCAGAGGCTGCTGTAACATGCGGAGTTTGTCTGAAACTTTGCACAACCTATGATGACTTGGCATATCATCTGAAAGCTGCTCACGAGGCTTTATTGTCTTGTGAGGGAAACAACTTCACTTGTAAGGTTTGCGGAAGGTACCACAATGCCAGGAGCAAATTGTTGTTGCATATGAGCATCCATATCAACTGTAAGAATAATCCGATGTGCAAGAAGTGCAATCGTAGCTTCGAGACggaagaaaaattgaaggaGCACGTTGGGAATTGCGAGGGAAGACAGTCGGGACTGGGAATCAGACATGGTGCAGAGGATGTGAAGAATGAAGACAATgatgaaaatgaagataatGATGAGAATGATGAGAAGGGAAGTTTTATTGGTGATGAGGGAGACGAGAGGGAAGAGAAGCAAGGAAATTATGGATCGGGAGGAGAAAAGGGCTCTAATAATGAAGATAGCAGCTCGGATGATTCTGCAGATTCAGGAACGGATAGTTCCTCTACGTCCAGTGATGATGAAAATgagaatgaagaaaatgaagtaGCAGCTGAATCGAGAACTACAAGTAGGCTCGGGCAACTGAGTTGTACGAGTGATAGTGAAGAAGATTCGGACTCGGAAGTCCTTGAGGATGCTGCTGAGATTAAGTCTAATGTGAGGTCTGAAGACGTTAGAGAAAATCTAGACGTAAAAATGGAAGACATAGGAATTGAGTCCACTTTAGTGTTGTCCGAATCTGATACGAAAGATTCTGCAGCATTTGGAAGATTGGAGAATAAGCTAATGAAGGCTGAAACGAATAATATGGATTATTCGGATGATGAAGGTCCTCCGGTTTTAAGTCCAATGATGCCGTTATTGCCACCACAAGAGGAAGATATGAATAGTCAGATGGATGAGATGAGTCATAAATTGAGTCCGATGATCACTCTGGAAACAAAGATTAAGCAAGAAATGCAGAattgcaattttgaaaatatgcaaATCAACTAccagaatattgaaaataagaatCAAACAAAGAATAAGAATTTGGAGGAGTCTGAAGATTCAGAGTCTGAGAGTgaggatgaaaataaaatgtgtatttATGAGGAAGCTGGGAACCGAGAGATTAAGCCAGAAGGCTTAAGTGCGATCAGTGACGATGAAGAAGATGCAGAAATGCAGgaaGAAACCAAGGAAGAGGAAACTGCAGAAGATAAAGGAGCGGAAGTAGCTTCTGTCGAATCCGAAGAAGAAACTGAAAACGAGGAAATAGACGAGGAAGAGGGAGAGGGcgaggaagaggaagaagaagagggggaggaagaggaagaagaatcCGAAGATGAATGCGAGCAGATCCAAATTGTAAACCACAGTAGTCCCGCAACAATCGATAACTCAGAAACACTTTCACAAGTTCTGGAAGGGGAAGTTTCAGATCAAGAAGAGGCTGAAGAAGGTGAAGAGGTGGAAGAGGAAGAAgttgaagaagaggaagaagaggaagaagttGAAGAAGAGGAACCAGAAGAAAACtttagaaatgaaaatgttgaaGTTGAAGAGGAAGTAGCCGAGAATAATTCTCTTGTGGAGGAAGAAGTCATAGGAGAAGAAAACGACGAAGACGAAGCGATGATAGACGACGAAATGAACAACGAAGATAATTCCatacagaatttaaataaaacaatccTCACTGTCGGCGAGGATGCTGAAGGTAATCCCATCTTAATTCGCGAAGTAGTAACTGAATATCCTTACCAGGATGAATACGGTTGCGAATCTGAATATCCAAACGTTTCACATGAACAAACTCCTGCTTTTAATCCCAACGATAATCAAAGATTATCGGGAGAAAACTTTGGTTTAAGTAGTGATAGCCTCGACCAAACCATGACTGAATCAGAAGTACAGACGGTAGACGAATTGGATCATCACGAGGAGGTGGAGACCGATGAACAGGTTGAAGACAAAGATGATAGTGATATCGAAGAGTCAAGAATGAGTGCCAAAAGTTAA
- Protein Sequence
- MYNLENFYDFRTACINAVSVLESFLSADNNESDGDRRNPTKHYSELRLELLKEKEHMPILIPEAPVVNPNAALGTPPRLNSDGEADNDIDEVLEQNGMDEAADDAEDRKSEEYELDMETNPSDFLEMPPMLTEDVEENETVNVSVRARARDSRGFQHKSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCYKAYSTAKHRWGHVSTSHRGHPAVTCSYCSRIYSTRGNLEEHIRSRHAGLPLPPELPVPYIQPENKYQCKTCPKMYTNTTDLNKHSRICTGGQQKELPNNDPAIEKLKKIQVEASDMSSNDSTNETKDYKNAEAKLAKNPQLTILKQALTKGDILKRSYDEKYKTSSKTKKQARIDSNNTDVHKRWFCESCPQQFTSFDSFKEHELAHDTEKPYFCLLCEKDFAQKSSLSNHIVTMHGVDPHPIVNSDRCLKKVRLPEVWSKKSECTNGIPNLAIQQEEASSPYPEISTENEEEQPSNQEKIIEIDTVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGICLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLVTHVSIHNVDPSYDPASFVQLNSNYYNENLNSNEGIEQPVDGDVEDGEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVVLGESTANGSGTGPNGNGNRAQYHLFYICELCGNSHPSKWERWLHVSSVHGDDHEIKCERPDCGKIFATKTLRNEHAQHHAMQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSSHVKQKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEGHVLPDPSEYINDSGRLDNGEAMEVDFSCEMCGDLKFLSLEDLCNHRRITHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRFCKKTSASRDHLAAHIAKIHRYKSDVKNDTREPVNFRVAAPEDEVLHHCDRCKKDFYKRYLLRRHMKACHKYRKDPGALLTRCRACERIFKDRASLQKHIENHHSKYTCHLCDETITSKLGIMTHNRINHMNHPDLTCALSHCKKLFRTKEDLESHKMDHMIHSTPNVCDFCGDTAENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDTHGSILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFITDEGIRNHYECVHNVSKDQLSTFEYRLEIGRKRHYDNLEVIMKEEPEELEFDEEPTEDYSNDYKKRISDSDDYDARADFYARMNNEQEEQNPPLKKMKLDSKAKKKVKERQTYECENCKVQFNTKTQFWNHINLCPRRNMITKEEVTSLPTSILEAHLKNNNLIKREEPEQELDENNLNIPDFNLFEDINMQLSGQKPVQNISFKSSSGSNKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYDDLAYHLKAAHEALLSCEGNNFTCKVCGRYHNARSKLLLHMSIHINCKNNPMCKKCNRSFETEEKLKEHVGNCEGRQSGLGIRHGAEDVKNEDNDENEDNDENDEKGSFIGDEGDEREEKQGNYGSGGEKGSNNEDSSSDDSADSGTDSSSTSSDDENENEENEVAAESRTTSRLGQLSCTSDSEEDSDSEVLEDAAEIKSNVRSEDVRENLDVKMEDIGIESTLVLSESDTKDSAAFGRLENKLMKAETNNMDYSDDEGPPVLSPMMPLLPPQEEDMNSQMDEMSHKLSPMITLETKIKQEMQNCNFENMQINYQNIENKNQTKNKNLEESEDSESESEDENKMCIYEEAGNREIKPEGLSAISDDEEDAEMQEETKEEETAEDKGAEVASVESEEETENEEIDEEEGEGEEEEEEEGEEEEEESEDECEQIQIVNHSSPATIDNSETLSQVLEGEVSDQEEAEEGEEVEEEEVEEEEEEEEVEEEEPEENFRNENVEVEEEVAENNSLVEEEVIGEENDEDEAMIDDEMNNEDNSIQNLNKTILTVGEDAEGNPILIREVVTEYPYQDEYGCESEYPNVSHEQTPAFNPNDNQRLSGENFGLSSDSLDQTMTESEVQTVDELDHHEEVETDEQVEDKDDSDIEESRMSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394568;
- 90% Identity
- iTF_01394568;
- 80% Identity
- -