Basic Information

Gene Symbol
-
Assembly
GCA_032275165.1
Location
JAUESH010000020.1:3479120-3485953[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 7.3e-06 0.00096 20.3 1.0 1 23 181 203 181 203 0.98
2 29 0.03 3.9 8.9 1.4 1 23 226 249 226 249 0.96
3 29 3.2e-05 0.0042 18.2 0.5 2 23 256 278 255 278 0.97
4 29 0.00016 0.021 16.1 0.8 1 21 298 318 298 319 0.95
5 29 0.094 12 7.3 0.5 3 23 419 439 417 439 0.94
6 29 0.00035 0.046 15.0 0.5 1 23 445 468 445 468 0.96
7 29 0.00014 0.018 16.2 0.1 1 23 540 563 540 563 0.96
8 29 0.0094 1.2 10.5 0.4 1 23 569 592 569 592 0.96
9 29 0.14 19 6.8 1.5 1 23 605 627 605 627 0.97
10 29 4.2e-05 0.0055 17.9 0.9 3 23 672 693 671 693 0.96
11 29 0.97 1.3e+02 4.1 0.7 2 23 756 779 755 779 0.92
12 29 3.6 4.8e+02 2.3 0.0 2 23 788 810 788 810 0.84
13 29 0.23 30 6.1 0.1 2 23 817 839 816 839 0.93
14 29 1.5e-05 0.002 19.3 1.2 1 23 847 869 847 869 0.98
15 29 1.5 1.9e+02 3.6 1.3 1 23 901 925 901 925 0.92
16 29 0.00025 0.032 15.5 3.3 1 23 928 951 928 951 0.97
17 29 0.0041 0.54 11.6 0.8 2 23 958 980 957 980 0.95
18 29 0.07 9.2 7.7 9.5 1 23 1007 1030 1007 1030 0.94
19 29 0.0031 0.41 12.0 1.8 2 23 1042 1063 1041 1064 0.93
20 29 0.44 58 5.2 1.1 1 23 1067 1090 1067 1090 0.94
21 29 0.0092 1.2 10.5 2.8 2 23 1097 1120 1096 1120 0.94
22 29 3.4 4.5e+02 2.4 0.0 2 23 1157 1179 1156 1179 0.88
23 29 0.26 35 5.9 2.7 2 23 1188 1210 1188 1210 0.96
24 29 0.45 59 5.2 1.0 2 23 1216 1238 1215 1238 0.93
25 29 0.0018 0.23 12.7 0.5 1 21 1338 1358 1338 1359 0.96
26 29 0.37 49 5.4 1.9 2 23 1456 1478 1455 1478 0.94
27 29 0.38 49 5.4 0.3 2 23 1485 1507 1484 1507 0.94
28 29 0.35 46 5.5 1.8 1 23 1518 1540 1518 1540 0.97
29 29 0.01 1.3 10.4 0.4 3 19 1549 1565 1548 1567 0.94

Sequence Information

Coding Sequence
ATGATAGCTGAAGATGATCGACTGCCAAAGTGTCTTTGCTATCGATGCAtgtataatttggaaaatttttacgaCTTCAGAACAGCATGTGTAAATGCAGTTTCTGTTCTGGAAAACTTTCTGTCTGCAGATAACAATGAAAATGATGGCGACAGAAGGAATCCTACACAACATTGTTCGGAATTACGTTCGGAACTCCTCAAAGAGAAAGAACATATGCCAATACTCATTCCTGAAGCCCCCGTAGTGAATCCGAACGCAGCATTGGGGACACCACCAAGACTTAATTCTGATGGCGAAGCAGATAATGACATCGAGGAAGTTTTGGAACAAAGTGGCACGGATGAAGCTGCGGATGATGCTGAAGACAGAAAGTCAGAGGAGTACGAGTTGGATATGGAAACGAATCCCAGTGACTTTTTGGAAATGCCACCAATGCTCACAGAAGATGCAGAAGAAAATGAGACAGCGAACGTTTCTGCACGAGCACGTGCACGAGATTCTAGAGGATTTCAGCACAAATCTGAACAGCACGAAGTTTATGTCTGCTCACTTTGTAACAAGGCCTTCAGTTCAAAAGGCCATTTGTCCCTTCACGCGAGAATACACGTCGGTGCAGGTGATGTCATCGGTGAAAAGGTTATCACTGACGATCACACTTCTTACAAAAGACCCTATCAATGCGACCTCTGCTACAAGGCTTACTCGACGGCTAAACATCGATGGGGTCACGTATCAACTAGTCATCGagGTCATCCTGCGGTGACATGTAGTTATTGTTCACGCATTTACTCCACAAGAGGAAACTTAGAAGAACACATCCGTTCCAGGCACGCCGGTCTGCCACTTCCGCCGGAACTGCCAGTTCCCTACGTTCAACCAGAAAACAAATACCAGTGCAAGACTTGTCCCAAGATGTATACGAACACAACAGACCTTAATAAACACAGTCGAATCTGCACAGGAGGCCAGCAAAAGGAATTGCCAAATAATGACCTAGCCAtagagaaattaaagaaaattcaagttgaGGCTTCAGATATGTCGAGTAACGACTCGACCAACGAGACTAAAGATTACAAGAACGCTGAGGCTAAACTTGCAAAAAATCCTCAGCTCACAATTCTAAAGCAGGCGCTCACCAAAGGAGACATTTTGAAGAGAAGCTACGACGAAAAATACAAGACTAGTTCCAAAACCAAAAAGCAAGCAAAAACCGATAGTAATGATATTGATGTAAACAAGCGGTGGTTCTGTGAATCCTGCCCCCAGAACTTCACCTCGTTTGACAGCTTCAAAGAACACGAACTTTTACATGAAGCTGAAAAACCCTACTTTTGTTTATTATGCGAGAAAGATTTCGCCCAAAAATCTTCCTTAAGTAATCATATTGTGACTATGCATGGTGTTGATCCCCATCCTATCATCGACAGTGATAGGTGTTTAAAAAAGTCTCTTCTATCCCATGGatggaataaaaaatcagAGCCTACGAACGGAGAACCCAATCTGGTCATCAAAAAAGAGGAAGCTTCTTCGCCTTATCCCGAAATATCTATAGAAAACGAAGAAGAACTGCCAAGTAACCAAGACAAGATTATCGAAATTGACACAGTCTTCGTTTGCGAAATCTGTACTCGAGATTTTAATGACAGAGCATCCTTGTGGCTTCACATCCGAGCCACCCATAAGGAATTCGCCGCCTTTGCTTGCGGAGTctgtttaaaaatctgttctGACAACGCCCAGCTACTCAATCATGTGAATATGTATCACGGAGGTTCCAAACTTCTCATGTCTGAGCAGAGGCGCTACAGCTGTACAATTTGCGGAAGACAGCACGATTCTCGAAAAAAGTTAATCACCCACGTTTCGATTCACAACGTGGATCCCAGTTACGATCCTGCGAGTTTCGTTCAACTCAACAGCAATTATTACAACGAGAATCTAAATAGCAACGAAGGCATCGAGCAACCAGTTGATTGCGATGTCGAGGATGGAGAGAAAGTTGACTGCTACATCTGTTACAAATCATTCCCCAACGAAGATCATCTTATCAGGCATCAACGAAACGCTCACAAATCCGATCCAGCGGTAGTGATTGGAGAATCCACAGCGAATGGCAGTGGAACCGGGCCTAATGGAAATGGAAACAGAGCGCAGtatcatttattttacatttgcGAACTTTGCGGCAATTCGCATCCCAGCAAATGGGAACGTTGGCTACACGTTTCCAGTATTCACGGAGATGATCCTGAGATCAAGTGTGAGAGGCCAGATTGCGCGAAGATATTCGCAACAAAGACTCTTCGAAACGAACACGCCCAGCATCATTCAATGCAAGGTAGCTCGCCAAACACTTGTGAGATCTGCGGGAAATTATGGGGAAGCCGAGTAGATTATTGGAAGCACGTGATGGGAGTCCACTCAGACACTGTTCCTCTAATCTGTGGAGTTTGCCTCAAAGTATTCCCTAATGTTCTTCAATTAAGTTCTCACGTGAAGCAGAAACACTGGCCTTTAACAAACGGTGATTTTAGTTGTGATATTTGTGGCAGGCCTTATTCCAACAAGTCCAAAATGTCCAGGCACAGGAAGATTCATGGCCTCGATGGCGAGGGTCACGTGCTTCCAGAACCTAGTGAATACATCAACGATTCAGGGAGGCTTGACAATGGAGAAGCCATGGAGGTTGATTTCAGTTGTGAAATGTGTGGAGATTTGAAGTTCCTGAGCCTGGAAGACCTCTGCAATCATCGAAGAATTACGCACAACCTCTTCCCCTGTGATTTGTGTAACAAATGTTACGGCAGAACTTCGCACTTGTGGAAACATGTTAATCGAGTTCACAAGGGTCACAAGGACGTCACCTGTCGGTTCTGCAAGAAGACGAGCGCCTCAAGAGACCACTTAGCAGCCCATATTGCTAAGATTCACAGATACAAGTCTGATGTGAAAAACGATACAAGAGAACCAGTGAATTTCAGGGTTGCAGCTCCTGAAGACGAGGTTCTTCACCATTGTGACAGGTGCAAGAAGGACTTTTACAAACGGTATTTGCTTCGGCGTCACATGAAAGCATGTCATAAGTATCGAAAAGATCCTGGTGCTCTTTTGACTAGGTGTCGAGCTTGTGAAAGAATATTCAAGGATCGAGCGAGTCTTCAAAAACACATCGAGAATCATCACAGTAGTTACACTTGTCATTTGTGTAACGAAACGATAACTTCGAAGCTGGGGATCATGACTCATAATCGGATTAACCACATGGATCATCCAGATCTTACATGTGAGCTCAGTCATTGTAAGAAGCTTTTCCGCACAAAGGAGGATCTTGAATCTCATAAAAAGGATCACAGGATTCACACAACACCGAATGTTTGTGATTTCTGCGGAGACACTGCcgaaaataaacttaaattgaAGATGCATGTCTTGTCCTTGCATCGAAACGAAATAGGTGTTTCTTGTGGAGTCTGTCTTATTCCGATGAAAGACCcgaaggatttgaaaaaacatGTGGAGGAAACTCACGGAAGTATTCTTTCAAAGCCAAATACTTGTCAGGTTTGTGGAAAGCAGTATGCATCGAAGTGGAAAGCCTTTGATCATACGAAGAAGTGCCATGGGAAGGTTTTTAAGACCTGCAAACAATGCCTGGCTGTGTTTATTACCGAAGAAAGTATGAGGAATCATTATGAACACGTCCACAACGTTCCAAAAGACCAACTGGCTACTTTCGAATACCGCCTCGAAATCGGACGCAAGCGTCACTATGATAACTTGGAAGTCGTGATGAAAGAAGAGCCTGAGGAATTGGAATTCGATGAGGAACCGACAGAGGATTATTCGAATGATTATAAGAAAAGAATATCTGATTCTGATGACTATGATGCTCGAGCTGATTTCTATGCAAGGATGAACAACGAGCAGGAGGAACAGATGCGACCTTTGAAAAGGATGAAGCTGGACTCAAAGGctaaaaagaaagtaaaagagCGACAAACCTACGAGTGCGAGAACTGCAAGATACAGTTTAATACCAAGACTCAATTTTGGAATCATATTAACCTTTGCCCGAAGCGGAATATGATTACTAAGGAGGAAGTTACAAGTTTCCCAACGTCGATTCTGGAAGCAcatttaaagaataataacCTGATTAAGAGAGAGGAACCTGAACAGGAACTTGACGAGAATAACTTAAACATTCCAGACTTCAATCTCTTTGAAGATATCAATATGCAGTTGTCAGGTCAGAAACCAGTTCAAAACCTTTCGCTTAAATCTTCCTCGAGTAGTAATAAATGTTCAAGGAAGGATTCACGGAAAGTTTACGATGAATCTACAAACACCGAGTGTACTTGCGAAGTTTGTGGGAAGCAGTGGCCGGCGAAAAAGCACCTGTGGCAGCATTTGATTCGCTTTCATCGAGCAGAGGCTGCTGTAACATGCGGGGTTTGCCTAAAACTTTGCACAACTTACGATGACTTGGCTTATCATCTGAAAGCTGCTCACGAGGCTTTGCTGTCTTGTGAGGGAAACAACTTCACTTGTAAGGTTTGTGGAAGGTACCACAATGCTAGGAGCAAATTGTTGTTACACATGAGCATCCATATTAACTGCAAGAATAATCCGATGTGCAAGAAGTGCAAACGCAGCTTCGAGACGGAGGAAAAATTGAAGGAGCACGTTGGGAATTGCGAGGGAAGACAGTCGGGACTGGGAATCAGACATGACGCAGAGGATGTGAAGAATGAAGACAACGATGAAAATGAAGATAATGACGAGAATGATGAGAAGGGGAGTTTTATTGGAGATGAGGGAGACGAGAgggaagaaaaagaaggaaattaTGGATCGGGAGGAGAAAAGGGTTCTGATAATGAAGATAGCAGCTCGGATGATTCTGCAAATTCAGGAACGGATAGTTCCTCTACCTCGAGTGATGATGAAAATGagaatgaagaaaatgaagTAGCAGCTGAATCAAGAACTACAAGTAGACTCGGGGAACTGAGTTGCACGAGTGATAGTGAAGAAGACTCGGACTCGGAAGCCCTTGACGATGCTGCTGAGATTAAGTCTAATGTAAGGTCTGAAGATGATAGAGAAAATTTGGTCAGCAAAGAAGTAAAAATGGAAGACGTAGGGATTGAGTCCACTTTAGTGTTGTCCGAATCTGATACGAAAGATTCTGCAGCATTTGGAGGGTTGGAGAACAAGCTGATGAAGATTGAAACGAATAATATGGATTATTCGGATGATGAAGGTCCTCCGGTTTTGAGTCCAATGATGCCGTTGTTGCCACCACAAGAGGAAGATATGAATAGTCAGATGGATGAGATGAGTCATAAATTGAGTCCGATGGTCACTTTGGAAACAAAGATAGAACAGGAAATGCAGGattgtaattttgaagatatgcAGATCAACTAccagaatattgaaaataagaaTCAAACGAAGAGTAAGAATGTGGAGGAATCTGAAGATTCAGAGTCTGAGAGTgaggatgaaaataaaatgtgtatCTATGAAGAAGCTGGGAATCGAGAGATTAAGACAGAAGGCTCAAGTGTGATCAGTGACGATGAAGAAGATGCAGAAATGCAGGAAGAAACCAAGGAAGAGGAAACTGCAGAAGACAAAGGAGCGGAAGTAGCTTCTGCTGAGTCTGAAGAAGAAAGtgaaaatgaggaaatagaagaggaagaggaagaagaatcCGAAGATGAAAGCGAGCAAGTCCAAATTGCAAACCACAGTAGTCCCGCAACAATCGATCACTCAGAAACACTTTCACAAGATCTAGAAGGAGAAGTTTCAGATCAAGAAGAGGCTGAAGAAGGTGAAGAGGAGGAAGAGGAAAAAGTTGAAGAAGAGGAACCAGAAGAGAACTCCACAAATGAAAACGCTGAAGTTGAAGAGGAACTAGCCGAGAATAATTTTCTTGGGGAGGAGGAAGTCATAGGGGAAGAAAACTACGAAGACGAAGCGATGATAGACGACGAAATGAACAACGAAGATCATTCCTTgcagaatttaaataagaccATTCTCACTGTTGGGGAGGATGCTGAAGGTAATCCCATCTTGATTCGCGAAGTAGTAACTGAATATCCTTATCAGGACGAATACGATTGCGAATCTGAATATCCAAACGTTTCACATGAACAAACTCCTCTTTTTAATGCCGACGAAAATCAAAGATTATCGGGAGAAAACTTTGGCTTAAATAGTGATAGCCTCGACCAAACCATGACTGAGCCAGAAGTACAGACGGTAGACGAATTAGATCATCACGAGGAGGTGGAGACCGATGAACAGATCGAAGACAAAGCTGATAGTGATATCGAAGAGTCAAGAACGAGTGCCAAAAGTTAA
Protein Sequence
MIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVSVLENFLSADNNENDGDRRNPTQHCSELRSELLKEKEHMPILIPEAPVVNPNAALGTPPRLNSDGEADNDIEEVLEQSGTDEAADDAEDRKSEEYELDMETNPSDFLEMPPMLTEDAEENETANVSARARARDSRGFQHKSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCYKAYSTAKHRWGHVSTSHRGHPAVTCSYCSRIYSTRGNLEEHIRSRHAGLPLPPELPVPYVQPENKYQCKTCPKMYTNTTDLNKHSRICTGGQQKELPNNDLAIEKLKKIQVEASDMSSNDSTNETKDYKNAEAKLAKNPQLTILKQALTKGDILKRSYDEKYKTSSKTKKQAKTDSNDIDVNKRWFCESCPQNFTSFDSFKEHELLHEAEKPYFCLLCEKDFAQKSSLSNHIVTMHGVDPHPIIDSDRCLKKSLLSHGWNKKSEPTNGEPNLVIKKEEASSPYPEISIENEEELPSNQDKIIEIDTVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPASFVQLNSNYYNENLNSNEGIEQPVDCDVEDGEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVVIGESTANGSGTGPNGNGNRAQYHLFYICELCGNSHPSKWERWLHVSSIHGDDPEIKCERPDCAKIFATKTLRNEHAQHHSMQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSSHVKQKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEGHVLPEPSEYINDSGRLDNGEAMEVDFSCEMCGDLKFLSLEDLCNHRRITHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRFCKKTSASRDHLAAHIAKIHRYKSDVKNDTREPVNFRVAAPEDEVLHHCDRCKKDFYKRYLLRRHMKACHKYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRINHMDHPDLTCELSHCKKLFRTKEDLESHKKDHRIHTTPNVCDFCGDTAENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEETHGSILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFITEESMRNHYEHVHNVPKDQLATFEYRLEIGRKRHYDNLEVVMKEEPEELEFDEEPTEDYSNDYKKRISDSDDYDARADFYARMNNEQEEQMRPLKRMKLDSKAKKKVKERQTYECENCKIQFNTKTQFWNHINLCPKRNMITKEEVTSFPTSILEAHLKNNNLIKREEPEQELDENNLNIPDFNLFEDINMQLSGQKPVQNLSLKSSSSSNKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYDDLAYHLKAAHEALLSCEGNNFTCKVCGRYHNARSKLLLHMSIHINCKNNPMCKKCKRSFETEEKLKEHVGNCEGRQSGLGIRHDAEDVKNEDNDENEDNDENDEKGSFIGDEGDEREEKEGNYGSGGEKGSDNEDSSSDDSANSGTDSSSTSSDDENENEENEVAAESRTTSRLGELSCTSDSEEDSDSEALDDAAEIKSNVRSEDDRENLVSKEVKMEDVGIESTLVLSESDTKDSAAFGGLENKLMKIETNNMDYSDDEGPPVLSPMMPLLPPQEEDMNSQMDEMSHKLSPMVTLETKIEQEMQDCNFEDMQINYQNIENKNQTKSKNVEESEDSESESEDENKMCIYEEAGNREIKTEGSSVISDDEEDAEMQEETKEEETAEDKGAEVASAESEEESENEEIEEEEEEESEDESEQVQIANHSSPATIDHSETLSQDLEGEVSDQEEAEEGEEEEEEKVEEEEPEENSTNENAEVEEELAENNFLGEEEVIGEENYEDEAMIDDEMNNEDHSLQNLNKTILTVGEDAEGNPILIREVVTEYPYQDEYDCESEYPNVSHEQTPLFNADENQRLSGENFGLNSDSLDQTMTEPEVQTVDELDHHEEVETDEQIEDKADSDIEESRTSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394568;
90% Identity
iTF_01394568;
80% Identity
-