Basic Information

Insect: Synergus coniferae
Gene Symbol: gtf3a
Assembly: GCA_032164275.1
Location: JAUEJJ010000001.1:654490-660042[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0094 1.2 10.4 0.6 1 23 656 678 656 678 0.98

2 17 0.67 84 4.5 0.8 1 19 684 702 684 703 0.85

3 17 0.4 50 5.3 0.9 2 23 711 732 710 732 0.95

4 17 0.00014 0.018 16.1 1.4 3 23 741 762 739 762 0.96

5 17 0.0032 0.4 11.9 1.8 1 23 769 792 769 792 0.95

6 17 8.5e-05 0.011 16.8 0.7 1 23 798 821 798 821 0.94

7 17 0.14 17 6.7 1.4 2 23 829 849 828 849 0.96

8 17 8.2e-07 0.0001 23.2 3.1 2 23 855 876 854 876 0.97

9 17 8.8e-06 0.0011 19.9 0.1 1 23 882 904 882 904 0.98

10 17 0.00081 0.1 13.7 2.6 2 23 916 938 915 938 0.95

11 17 0.025 3.2 9.0 0.7 1 23 944 967 944 967 0.93

12 17 0.051 6.3 8.1 3.0 3 23 990 1011 988 1011 0.92

13 17 0.00095 0.12 13.5 1.1 2 23 1018 1040 1017 1040 0.96

14 17 3.1e-05 0.0039 18.2 1.2 2 23 1048 1069 1047 1069 0.96

15 17 0.00028 0.035 15.2 2.2 1 23 1075 1098 1075 1098 0.96

16 17 4.7 5.8e+02 1.9 6.3 2 23 1105 1126 1104 1126 0.96

17 17 0.028 3.4 8.9 1.3 1 23 1132 1154 1132 1154 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0094	1.2	10.4	0.6	1	23	656	678	656	678	0.98
2	17	0.67	84	4.5	0.8	1	19	684	702	684	703	0.85
3	17	0.4	50	5.3	0.9	2	23	711	732	710	732	0.95
4	17	0.00014	0.018	16.1	1.4	3	23	741	762	739	762	0.96
5	17	0.0032	0.4	11.9	1.8	1	23	769	792	769	792	0.95
6	17	8.5e-05	0.011	16.8	0.7	1	23	798	821	798	821	0.94
7	17	0.14	17	6.7	1.4	2	23	829	849	828	849	0.96
8	17	8.2e-07	0.0001	23.2	3.1	2	23	855	876	854	876	0.97
9	17	8.8e-06	0.0011	19.9	0.1	1	23	882	904	882	904	0.98
10	17	0.00081	0.1	13.7	2.6	2	23	916	938	915	938	0.95
11	17	0.025	3.2	9.0	0.7	1	23	944	967	944	967	0.93
12	17	0.051	6.3	8.1	3.0	3	23	990	1011	988	1011	0.92
13	17	0.00095	0.12	13.5	1.1	2	23	1018	1040	1017	1040	0.96
14	17	3.1e-05	0.0039	18.2	1.2	2	23	1048	1069	1047	1069	0.96
15	17	0.00028	0.035	15.2	2.2	1	23	1075	1098	1075	1098	0.96
16	17	4.7	5.8e+02	1.9	6.3	2	23	1105	1126	1104	1126	0.96
17	17	0.028	3.4	8.9	1.3	1	23	1132	1154	1132	1154	0.98

Sequence Information

Coding Sequence: ATGGTTTATGGAGAGTCAAGTTTGCTATCTGATCAAGAAATCGCAAATTTAGAATACCAGGATCACACCTgcagaataaaaatgaactaCCACTCTGCAGAGAACCAAATCGGTTCTGTGCAACCGACTATGTTTCACACTTATTCTTCTCCTTCGTCAGCTTTGCTGGAAATATCTTCTAATCCAATAACCGACATCAACGACCTCAAGAGAATCACCCCCAGagtgaaacttttaaatcaagaGTCGCCGACACTGCAACCAGTCAAAAAACTAAATTCCCCTTACAGATTACTCAATCAGAAATTGGACTCGACGAAAAAGgcactgaaaaaatattgtcgtACCTGCGCTGAAGAGAAATTTCCCCTCATTGATATTTTTAGCGATAAGGGTTTGCAGATGAAACTCAATCAGCAGATTCGTCatctggaaaatattaaagaatccGATTCCCTCTCGACTCAAATGTGCATGGATTGTATCTGTGATTTAAGAATGAGTTATACTTTCTTCAAGCAGATTAAAGAAGCAGAGAATAAATTGAAGTCAATCCAGGTGACATTGCTCGAGGCAGAGACaccgaatttaaaaatgcaagaaGAGGTTTCTAAAATTGATCCTCTTTTCATTCCACATGATCCTGACAATTTAAATGATAACTGCCTTCGAATTTCTGCGGTATATTCTACTCAAGACTCCGAAAGCTGGGAACTAGATCCACTTTCGAATGTCAAAATAGAGCCTCAAATTCAGGAAAAGGACAAGCCTCTGAATGATGACGATTCTATCGAGGAATTTGATCCTGAAGATCCTCCTTATAATCCTAATAGTGAAGAGGAAGGGAATTCAGACGAAGAATTGGAAAATGCTCCAAGCACTTTTAAGAGTCCAAAAAGATTAGAAGCGAAGAGTTTCATGAACAAAGAAGCAGAGATAAGAGAGATTGAAAGCGAGAgtagaaagagaaaattatctGAGGAAAAAAATGAGGCCGTGGATATATTGTCGAAGTTGAAAACGATTGGACCGAAAGATGTGAAGATTAGGAAATTGAACGTGAAGGATGCTTTGAATATAAAAGAGGAGGAGAATGGTGTCATGTATGTTACAGTTCGAGGCGCAAAACCAAATGAACTGCTTTTAGTGAAAGTGAAGAAAATGGAGAAGTCTGAAAAAGGTAAAACTGTGGGTAAGAAAGAAGCTTCGAAAGAGGAGAAAGATCCCTTCATGGATCGGTCCTTAGAAGCAAAAGGCCAAATTATAGAAGAACAAAtagaagaatataaaaagaagagGGAGAAAATTCTTGGCGCTTCGGTTCAAAATGATGTGCCTGTACAGTGTCAGggggaatttaaaatcaagaCCGATGTTCTTAATGTAAAGGAACAGGAAAGTCTTTCTGAAATACTTCCTcaggaagaagaggaaattCTGGAGGAAAGTCTAGATACAAAGGAAATTATAATCCAGGAAGAATTGACCTTGGATATTTTGCCCAAGGCAGTTCCAATCGAACCAGTTTTAACCAAGGAGATACACAAGGAAGTTCCAGAGATAAAAAAGGAAGTTCTAGAggtaaaaaaggaaattccaGAGATAAGGAAGGAGAAATCGAAGAAGTGCAAAGAACCGAAACCGAAAGTTTACAACACCCCGGAGGAATTCCAATTTCGGATGGAGATGGTGAAGACAAAATGGGAAGACAAGCAGCGAAAGGATTGGGAAGAGGCACATCCTGGAGTTGAAAATCCGGTGGATAGATTGAAAAGAGTTTTGGGGGAGGCGTGCGAGgtgagaaattttcaagactttATAGAGAATCTCCAGCAAAGAAAGATGATACTGGCGAAATTAAATGATGAAGACATCATTAACCTTTTCCAGGAGAGAATCATTTCTCAGAAAACTATATCCGAACTGGAAGAAGAAGTGAAAGAAGAAATACCTGAGGTTGAACTATTCGAATGTGATTTTTGCTTCCTATCCTTTACATCGAAGGAAATTCTCGACGAGCATATGAAGATTcacgatttcaaaattcttcactACTGCGAGGATTGTAACGAGGAGTTTACAGTTTTgagattgaagaaaaatcacaATGTGATTTGCATCAGGAAGCTTATTTGTAAGTACTGCGATTTGATGTTGGATTCGAAGGGGAAGAAGAGACAACACGAGCAAAAGCATTGCGACAATCTTTTTGGACAAATTTGTGAATATTGTGGGGAGAGATTCAAACACCAAGGAACTCTGGATCAGCATGTCAAGTCGAGACACATGCCCTTGGAGAAGGTTTTCCAGTGCCCGAAATGTCCGAAGAAGTTTGCCTTCAATACGAAACTGAGTTTTCATTTGAAGAGCGTTCACACCTCCTTGAGGGCTTATTTGTGCGAGGATTGTGGAGCGGATTTTAAAAACCCGGCGAGCTTGAGACACCACAGAATTAGGAAGCATCAGCCGACAGGAAACAAGAAGGAATGTCCAGTTTGTAACAAAATGATTCCCTTTTATAGTCTCAGCAAACACATGCACACGCATAAGGCTTACACGATCAAGTGTCCGCATTGCACTAAGATGTTCAAGAATTCTTCAACGCTGAAGCAGCATGTCAGAATTCATGAGGATCAGAGACAGTTTAGATGCGACATTTGCGGAGTTGGATTTAACCGAAGAGACGGTCTTCGACTCCACTTGAAGGTTCACGAAAAATCGGACAGTCGAGGCCTGAAAGAGTGTTCCTGCCAAATGTGTGGGGAAAAATTCCCGAATCACTCAATGCTCGTTATTCATCGAAATCGTGTTCACAAGGACGGGAGAAATCACACTTGTAATATTTGCAACAGGTCGATGATTTCAGCCCGATCTCTGGCGTGGCATTTAGCTCACATTCACAATGAAGCTCTTCCTGGAGTCATAAGCGAAGAATTGGATGGCGGAGGAGAAACAAAAAGAGTCTGTTGCCTACAGTGCAACAAGacttttaaaactgaaatgaTTTTGAGAACTCATATCAAAAATTCTCACATGCAGAAGGAACCAGTGAAGTGTTTAGATTGCGATTTGACCTTCACGAGTGACGTTAGACTCAGACATCACATGATGGTCACCCATAACAGACTGGATGGGACTTTGGAGTGTCCGCATTGCCCGAAAAGATTTGTGAATCAGCTGAGACTGAAGACTCACATGATTTCGCATTCTGAGGATCGACCATACACGTGTGAGATTTGTGGGTTTAGTCTCAAGACGAAGATTCAATTGATTAAGCATCATCAGAATCGGCACAGTGATGAGAGGCCTTTAAAGTGTCGACATTGCGAATGGAAATGTAAACAGgTTAGCGCTCTTGTTTGCCACGAGAGGACTCACACAAATGAGCGTCCTTATGCCTGCAGCGTCTGTTTGCAAAGATTCAAGTACCTGGgggataaaaataaacacgAGAGACGTCATGAATCTCTGGGAGGTAGTGGATTCAAGAGAATCGTTACTGCTAGAAGCGCGAGACGATATCAAGTTAAGGAAGATACCGAGGGTGATTTTTCCACTTCTGAACCAGAACTGCTGGCAGAGCAAACGGAAGATAGGCTCGGAGATTACGAGATTGACGAgcaaaatgttaaaaatgagGATCAGGAGAATGTCACGGAAGACGATAATGATTATTCTAATTATCAACAGgattATGAAGAAACTTCGAGAGAAGCTTCGGAGGCTGCTGAGGTGATAATGAGTATGGAAGATGGAAGTGTTTACACCGAGGAAGTAACAGCTGAAGATACAGAGCATATTGAGACAACACATATAATTGAGGACGAAATTATGGCGAATGAAATCCTTCAGCCAGGAACTGTTGTTCATATTGAACAGCAAGATGAGGAAGGGAAAATTCAGGTTATTCCTATCGTCCTTTCAATTAATGATTTAGCTACAGAAAACTCGGAAGTTGATCATGCAACAGCTTCGATTATGTATGATAACGAAGAGTGTAATTAA
Protein Sequence: MVYGESSLLSDQEIANLEYQDHTCRIKMNYHSAENQIGSVQPTMFHTYSSPSSALLEISSNPITDINDLKRITPRVKLLNQESPTLQPVKKLNSPYRLLNQKLDSTKKALKKYCRTCAEEKFPLIDIFSDKGLQMKLNQQIRHLENIKESDSLSTQMCMDCICDLRMSYTFFKQIKEAENKLKSIQVTLLEAETPNLKMQEEVSKIDPLFIPHDPDNLNDNCLRISAVYSTQDSESWELDPLSNVKIEPQIQEKDKPLNDDDSIEEFDPEDPPYNPNSEEEGNSDEELENAPSTFKSPKRLEAKSFMNKEAEIREIESESRKRKLSEEKNEAVDILSKLKTIGPKDVKIRKLNVKDALNIKEEENGVMYVTVRGAKPNELLLVKVKKMEKSEKGKTVGKKEASKEEKDPFMDRSLEAKGQIIEEQIEEYKKKREKILGASVQNDVPVQCQGEFKIKTDVLNVKEQESLSEILPQEEEEILEESLDTKEIIIQEELTLDILPKAVPIEPVLTKEIHKEVPEIKKEVLEVKKEIPEIRKEKSKKCKEPKPKVYNTPEEFQFRMEMVKTKWEDKQRKDWEEAHPGVENPVDRLKRVLGEACEVRNFQDFIENLQQRKMILAKLNDEDIINLFQERIISQKTISELEEEVKEEIPEVELFECDFCFLSFTSKEILDEHMKIHDFKILHYCEDCNEEFTVLRLKKNHNVICIRKLICKYCDLMLDSKGKKRQHEQKHCDNLFGQICEYCGERFKHQGTLDQHVKSRHMPLEKVFQCPKCPKKFAFNTKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHQPTGNKKECPVCNKMIPFYSLSKHMHTHKAYTIKCPHCTKMFKNSSTLKQHVRIHEDQRQFRCDICGVGFNRRDGLRLHLKVHEKSDSRGLKECSCQMCGEKFPNHSMLVIHRNRVHKDGRNHTCNICNRSMISARSLAWHLAHIHNEALPGVISEELDGGGETKRVCCLQCNKTFKTEMILRTHIKNSHMQKEPVKCLDCDLTFTSDVRLRHHMMVTHNRLDGTLECPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFSLKTKIQLIKHHQNRHSDERPLKCRHCEWKCKQVSALVCHERTHTNERPYACSVCLQRFKYLGDKNKHERRHESLGGSGFKRIVTARSARRYQVKEDTEGDFSTSEPELLAEQTEDRLGDYEIDEQNVKNEDQENVTEDDNDYSNYQQDYEETSREASEAAEVIMSMEDGSVYTEEVTAEDTEHIETTHIIEDEIMANEILQPGTVVHIEQQDEEGKIQVIPIVLSINDLATENSEVDHATASIMYDNEECN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392994; iTF_01393765; iTF_01392243; iTF_01394597; iTF_01390564; iTF_01391431;
90% Identity: -
80% Identity: -