Basic Information

Insect: Synergus magnus
Gene Symbol: gtf3a
Assembly: GCA_032275165.1
Location: JAUESH010000002.1:174958-180216[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.045 5.9 8.3 0.2 1 23 644 666 644 666 0.97

2 17 0.72 95 4.5 0.8 1 19 672 690 672 691 0.85

3 17 0.42 56 5.3 0.9 2 23 699 720 698 720 0.95

4 17 0.0034 0.45 11.9 3.5 3 23 729 750 728 750 0.97

5 17 0.0076 1 10.8 1.3 1 23 757 780 757 780 0.94

6 17 9.1e-05 0.012 16.8 0.7 1 23 786 809 786 809 0.94

7 17 0.15 20 6.7 1.4 2 23 817 837 816 837 0.96

8 17 5.3e-07 6.9e-05 23.9 3.4 2 23 843 864 842 864 0.97

9 17 6.6e-06 0.00086 20.4 0.3 1 23 870 892 870 892 0.98

10 17 0.0006 0.079 14.2 2.1 2 23 904 926 903 926 0.95

11 17 0.27 35 5.9 0.9 1 23 932 955 932 955 0.92

12 17 0.087 11 7.4 5.6 3 23 978 999 976 999 0.93

13 17 0.001 0.13 13.5 1.1 2 23 1006 1028 1005 1028 0.96

14 17 3.3e-05 0.0044 18.2 1.2 2 23 1036 1057 1035 1057 0.96

15 17 0.0012 0.15 13.3 2.3 1 23 1063 1086 1063 1086 0.96

16 17 0.93 1.2e+02 4.2 5.7 2 23 1093 1114 1092 1114 0.96

17 17 0.0048 0.63 11.4 1.9 1 23 1120 1142 1120 1142 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.045	5.9	8.3	0.2	1	23	644	666	644	666	0.97
2	17	0.72	95	4.5	0.8	1	19	672	690	672	691	0.85
3	17	0.42	56	5.3	0.9	2	23	699	720	698	720	0.95
4	17	0.0034	0.45	11.9	3.5	3	23	729	750	728	750	0.97
5	17	0.0076	1	10.8	1.3	1	23	757	780	757	780	0.94
6	17	9.1e-05	0.012	16.8	0.7	1	23	786	809	786	809	0.94
7	17	0.15	20	6.7	1.4	2	23	817	837	816	837	0.96
8	17	5.3e-07	6.9e-05	23.9	3.4	2	23	843	864	842	864	0.97
9	17	6.6e-06	0.00086	20.4	0.3	1	23	870	892	870	892	0.98
10	17	0.0006	0.079	14.2	2.1	2	23	904	926	903	926	0.95
11	17	0.27	35	5.9	0.9	1	23	932	955	932	955	0.92
12	17	0.087	11	7.4	5.6	3	23	978	999	976	999	0.93
13	17	0.001	0.13	13.5	1.1	2	23	1006	1028	1005	1028	0.96
14	17	3.3e-05	0.0044	18.2	1.2	2	23	1036	1057	1035	1057	0.96
15	17	0.0012	0.15	13.3	2.3	1	23	1063	1086	1063	1086	0.96
16	17	0.93	1.2e+02	4.2	5.7	2	23	1093	1114	1092	1114	0.96
17	17	0.0048	0.63	11.4	1.9	1	23	1120	1142	1120	1142	0.98

Sequence Information

Coding Sequence: ATGAACTACCACTCCGCAGAGAACCAAATCGGTTCTCTGACACCGACTATGTTTCACACTTATTATTCTCCTTCTCAATCCTTGCAGGAAATATCCTCCAATCAAATAACCGACATCAACGTCCTCAGAAAAATCACCCCCAGAGTCAAACTTTTGAATCAAGAGTCGCCGACACTCCAACCAGTCAGAAAAGTAAATTCCTCTCTCAAAATGCACGATCAGAATTTGGACTCCACGAGAAAggcactgaaaaaatattgtcgtACCTGCGCTGAAGTGAAATTTCCCCTCATTGATATTTTTAGCGATAAGGGCATTCAGATGAAACTCAGCCAGCAGATTCGTCAcctagaaaatattaaagaaaccGATTCCCTCTCGACTCAAATGTGCATGGATTGTATCTGTGATTTAAGAATGAGTTATAATTTCTTCATGCAGATTAAAACAGCAGAGAATAAATTGAAGTCAATCCAGGCGAAGTTGCTCGAGACggcgaatttaaaaaagcaagaggaggcgaatttaaaaaagcaagAGGAGgcgaatttaaagaaacaagaGGAGGCTTCTAAAATTGATCCTCTTTTCATTCCACACGATCCTGAGAATGTAGACGATAACGGCCCTCGAATTTCTGCGGTATATTCTGCTCAAGACTCTCAAAGCTGGGAACCAGATCCACTTTTGAATGTTAAAATGGAGCCTCAAATTCTAGAAGAGGACAAGCTTCAGAGTGATAACGATTCTCTCGAGGAATTTGATCCTGAAGATCCTCCTTACAATCCTGATAGTGAAGAGGAAGAGAATTCAGAGGAAGAACTAGAAAACGCTCCAAGTCTTTTTAAGAGTCCAAAAAGATTAGAAGCGAAGAGTTTCGTGAACAAAGAATCAGAGAAAATAGAGATTGAAAGCGAGAGTTTGAAGCGAAAATTATCCGAGGAAAGAAACGAGGCTGTGGATATATTGTCGAAGTTGAAAACGATTGGACCGAAAGATGCGAAGATTAGGAAGTTGAACGTAAATGAGgctttgaatataaaaaaggagGAGAATGGAGTCATGTATGTTACAGTTCGAGGCTCAAAACCAAATGAACTGCTTTTAGTGAAAGTGAAGAAAATGGACAAGGCTGAAAAAGGTAAAACTCTCGGTAAGAAAGACGCTCCGaaagaaaaggagaaagaTCCCTTCATAGATCGATCTTTCGATGAGAAAGGCCAAATTATAGAAGAACAGAtagaagaatataaaaagaagagGGAGAAAATTCTTGGTGCTTCGGCTCAAAATGATGTGACTGAACTCTATCAGGGGGAAGTTAGAATCAAGAGCGATGTTCTTAATGTAAAGGAAAAGGAAAGcctttctgaaatatttcatgagGAAGAAGCGGAAATTCTGGAAGAAAGTCtagatataaaagaaattataatccCGGAAGATTTACCCAAGGATATTCTACCCAAGGCAATTCAAATCAACCCAATTTTAACCAATGAGATATCCAAGGAAGTTCCAGAGATAAAACAGGAAGTTCTAGAGATAAAAAAGGAAGTGCTAGAGATAAGAAAGGAGAAAACGAAGAAGAGCAAAGAACCGAAACCGAAAGTTTACAACAACCCGGAGGAATATAATTTTCGGATTGAGACGGTGAAGACCAAATGGGAAGACAAGCAGCGAAAGGATTGGGAAGAAGCGCATCCTGGGGTTGAAAATCCGGTGGAtagattgaaaagaattttgggCAAGGCGAGCGAGGGGGGAAATCTTCAAGACTTTCTTGAGAATCTCCAGCAAAGAAAGATGATACTGACGAAGTTAAATGATGAAGACATCATTACCCTTTTCCAAGAGAGAATCAACTCTCAGAAAGATGTATCCGAAGCGGAAGAAGAAGTGAAAGTAGAAGTGCCTGAGGTAGAACTATTCGAATGTGATTTTTGCTTCCTATCATTTCCAACACAGGAAGTTATCGACGAGCATATGAAGATTCACGATGCGAAAATTCTTCACTACTGCGAGGATTGTAACGAGGAATTTACGGTCTTGAGATTGAAGAAGAATCACAATGTGATTTGCATCAGGAAGCTGATTTGCAAGTACTGCGATTTGATGTTGGATTCGAAGGGGAAGAAGAGACAACATGAGCAAAAACATTGTGACAATCTTTTTGGAGCGCTTTGCGAATATTGTGGGGAGAAATTCAAACATCACGGAACTTTGGATCAGCATGTCAAGTCGAGACACATGGCTTTGGAGAAGGTTTTCCAGTGCCCGAAATGTCCGAAGAAGTTTGCCATCAAGACGAAACTGAGTTTTCATTTGAAGAGTGTTCATACCTCCTTGAGGGCTTATTTGTGCGAGGATTGTGGGGCGGATTTTAAAAACCCAGCGAGCTTGAGACACCACAGAATTAGGAAGCATCAGCCGACTGGAAACAAGAAGGAATGTCCAGTTTGCAATAAGATGATTCCCTTTTATAGTCTCAGCAAACACATGCATACGCACAAGCCTTACAATATCAAGTGTCCGCATTGCACTAAAACGTTCAAGAATTCTTCGACGCTGAAGCAGCATGTCAGAATTCATGAGGATCAGAGACAGTTTAGATGCGACACTTGCGGAGTTGGATTCAACCGAAGAGACGGTCTTCGACTCCACATGAAGGTCCACGAAAAATCGGACAGTCGAGGCCTGAAAGAGTGTTCCTGCCAAGTGTGTGGAGAAAAGTTCCCGAATCACTCGATGCTTGTCATCCATCGAAATCGTGTTCACAAGGACGGGAGAAATCACACTTGTACTATTTGCAACAGGTCGATGATTTCTGACCGGTCTCTGGCATGGCATTTAGCTCACATTCACAATGAAGCTCTTCCTGGAGTCATAAAGGAAGAAATGGACGGTGGAGGGGAAACAAAAAGAGTCTGTTGCTTCCACTGCAACAAGacttttaaaactgaaatgaTTCTGAGAACTCATATCAAAAATTCTCACATGCAAAAGGAACCGGTGAAGTGTTTAGACTGCGATTTGACCTTCACGAGTGATGTTAGACTCAGACATCACATGATGGTCACCCACAACAGGCTTGAGGGGACTTTGGAGTGTCCGCATTGTCCGAAAAGATTTGTCAATCAGCTGAGACTCAAGACTCACATGATTTCGCATTCTGAGGATCGACCTTACACGTGTGAGATTTGTGGGTTTAATCTCAAGACGAAGATTCAGTTGATTAAGCATCATCAGAATCGCCACAGCGATGAGAGACCTTTACAGTGTCGACATTGTGATTGGAGATGTAAACAggTTAGCGCCCTCGTTTGCCACGAAAGGACTCACACGAACGAGCGTCCTTATGCCTGCAGCGTCTGCAAGCAAAGGTTCAAGTACCTGggggataaaaataaacacgAGAGACGACATGTATCTCTGGGAGGTAGCGGATTCAAGAGAATCGTTACTACTAGAAGCGCGAGACGATCTCAACCTAAGGAAGAAGGCGAGGGTGATTCTTCCATTTCTGAACAGGACCAACTCGTGGAACAAATGGAAGAAGATATGGAAATGGAGGAGAGTCTAGATTACGAGATTGAGGAGGAAAATGTTAAACTTGAGGAACGGGGGGAGGTCACGGAAGACGATAATGAGTATTCTAATTACCAACAGGTAATTATTACTGATTACGGACAGgattaTGAAGAAACTTCGAGAGAAGCTTCGGAGGCTGCGGAGGTGATAATGAGCATGGAAGATGGAAGTGTTTACACCGAAGAAGTGACAGCTGAAGAAACAGAGCAGATAGAGACAACACATATAATTGAAGACGAAATTATGGCGAATGAAATCCTTCAGTCGGGAACTGTTGTTCATATTGAACAGCAAGATGAGGAAGGGAAAATCCAGGTTATTCCTGTCGTCCTTTCAATTCCTGATTTAGCTACAGAAAACTCTGAAGTTGACCTTGCAACAGCTTCGATTATGTATAATGAAGAGTGTAATTAA
Protein Sequence: MNYHSAENQIGSLTPTMFHTYYSPSQSLQEISSNQITDINVLRKITPRVKLLNQESPTLQPVRKVNSSLKMHDQNLDSTRKALKKYCRTCAEVKFPLIDIFSDKGIQMKLSQQIRHLENIKETDSLSTQMCMDCICDLRMSYNFFMQIKTAENKLKSIQAKLLETANLKKQEEANLKKQEEANLKKQEEASKIDPLFIPHDPENVDDNGPRISAVYSAQDSQSWEPDPLLNVKMEPQILEEDKLQSDNDSLEEFDPEDPPYNPDSEEEENSEEELENAPSLFKSPKRLEAKSFVNKESEKIEIESESLKRKLSEERNEAVDILSKLKTIGPKDAKIRKLNVNEALNIKKEENGVMYVTVRGSKPNELLLVKVKKMDKAEKGKTLGKKDAPKEKEKDPFIDRSFDEKGQIIEEQIEEYKKKREKILGASAQNDVTELYQGEVRIKSDVLNVKEKESLSEIFHEEEAEILEESLDIKEIIIPEDLPKDILPKAIQINPILTNEISKEVPEIKQEVLEIKKEVLEIRKEKTKKSKEPKPKVYNNPEEYNFRIETVKTKWEDKQRKDWEEAHPGVENPVDRLKRILGKASEGGNLQDFLENLQQRKMILTKLNDEDIITLFQERINSQKDVSEAEEEVKVEVPEVELFECDFCFLSFPTQEVIDEHMKIHDAKILHYCEDCNEEFTVLRLKKNHNVICIRKLICKYCDLMLDSKGKKRQHEQKHCDNLFGALCEYCGEKFKHHGTLDQHVKSRHMALEKVFQCPKCPKKFAIKTKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHQPTGNKKECPVCNKMIPFYSLSKHMHTHKPYNIKCPHCTKTFKNSSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHMKVHEKSDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRNHTCTICNRSMISDRSLAWHLAHIHNEALPGVIKEEMDGGGETKRVCCFHCNKTFKTEMILRTHIKNSHMQKEPVKCLDCDLTFTSDVRLRHHMMVTHNRLEGTLECPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRHCDWRCKQVSALVCHERTHTNERPYACSVCKQRFKYLGDKNKHERRHVSLGGSGFKRIVTTRSARRSQPKEEGEGDSSISEQDQLVEQMEEDMEMEESLDYEIEEENVKLEERGEVTEDDNEYSNYQQVIITDYGQDYEETSREASEAAEVIMSMEDGSVYTEEVTAEETEQIETTHIIEDEIMANEILQSGTVVHIEQQDEEGKIQVIPVVLSIPDLATENSEVDLATASIMYNEECN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389691;
90% Identity: -
80% Identity: -