Basic Information

Insect: Synergus japonicus
Gene Symbol: -
Assembly: GCA_900474275.1
Location: UCOH01004741.1:2222-14018[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.011 1.1 10.3 0.2 1 23 868 890 868 890 0.98

2 17 1.9 2e+02 3.2 0.5 1 19 896 914 896 915 0.80

3 17 0.49 50 5.0 0.9 2 23 923 944 922 944 0.95

4 17 0.00021 0.022 15.6 1.5 3 23 953 974 951 974 0.96

5 17 0.0058 0.6 11.1 1.5 1 23 981 1004 981 1004 0.94

6 17 0.0001 0.011 16.6 0.7 1 23 1010 1033 1010 1033 0.94

7 17 0.17 18 6.5 1.4 2 23 1041 1061 1040 1061 0.96

8 17 4.6e-06 0.00048 20.8 3.2 2 23 1067 1088 1066 1088 0.97

9 17 7.6e-06 0.00078 20.2 0.3 1 23 1094 1116 1094 1116 0.98

10 17 0.0007 0.072 14.0 2.1 2 23 1128 1150 1127 1150 0.95

11 17 0.058 6 7.9 1.1 1 23 1156 1179 1156 1179 0.93

12 17 0.1 10 7.2 5.6 3 23 1202 1223 1200 1223 0.93

13 17 0.0012 0.12 13.3 1.1 2 23 1230 1252 1229 1252 0.96

14 17 3.8e-05 0.0039 18.0 1.2 2 23 1260 1281 1259 1281 0.96

15 17 0.001 0.1 13.5 2.6 1 23 1287 1310 1287 1310 0.96

16 17 7.6 7.8e+02 1.3 6.5 2 23 1317 1338 1316 1338 0.96

17 17 0.0056 0.57 11.2 1.9 1 23 1344 1366 1344 1366 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.011	1.1	10.3	0.2	1	23	868	890	868	890	0.98
2	17	1.9	2e+02	3.2	0.5	1	19	896	914	896	915	0.80
3	17	0.49	50	5.0	0.9	2	23	923	944	922	944	0.95
4	17	0.00021	0.022	15.6	1.5	3	23	953	974	951	974	0.96
5	17	0.0058	0.6	11.1	1.5	1	23	981	1004	981	1004	0.94
6	17	0.0001	0.011	16.6	0.7	1	23	1010	1033	1010	1033	0.94
7	17	0.17	18	6.5	1.4	2	23	1041	1061	1040	1061	0.96
8	17	4.6e-06	0.00048	20.8	3.2	2	23	1067	1088	1066	1088	0.97
9	17	7.6e-06	0.00078	20.2	0.3	1	23	1094	1116	1094	1116	0.98
10	17	0.0007	0.072	14.0	2.1	2	23	1128	1150	1127	1150	0.95
11	17	0.058	6	7.9	1.1	1	23	1156	1179	1156	1179	0.93
12	17	0.1	10	7.2	5.6	3	23	1202	1223	1200	1223	0.93
13	17	0.0012	0.12	13.3	1.1	2	23	1230	1252	1229	1252	0.96
14	17	3.8e-05	0.0039	18.0	1.2	2	23	1260	1281	1259	1281	0.96
15	17	0.001	0.1	13.5	2.6	1	23	1287	1310	1287	1310	0.96
16	17	7.6	7.8e+02	1.3	6.5	2	23	1317	1338	1316	1338	0.96
17	17	0.0056	0.57	11.2	1.9	1	23	1344	1366	1344	1366	0.98

Sequence Information

Coding Sequence: ATGAAATTCTTCAAGTCTAGGCTGGAAAATTTAATCCTtggtttgaaaatttgtaaaggtcTTAAGAAAGGTCTAAATCCAGACCCAAAAACTGTCCCCTATCCCTTATTCCGTCGTAGTAGTCATCAAACTTTCTGGATTCCTTCTTCTAAATTTCCAATTGTTCCAAAGGCACAGTGTGCAACTGAAGTCGAAGCTGTTCACTTCATAGAACTCGTCTCgttcgaaattcaaattgctAGAATCTTTTTCCTCAAAATGGCAATGGAGTGGCTAAAAACTGTGTTGATAATAGAATACGCGAAACAAAGCAAGTGTATTTCGGATCCGGAACATAGAAGATGCAGTTCAGTTTGTCATGCCAAATACTTAGATCTGGGTAGATATGTTCAAAGACAATTGGCATATCCGGTTCGGGGTGCTGTAACAACTGCTGATGCCAAGGAACGATGGGAACGTTTGTTAAAGAAATATCTGAAGGAATTGAAGAAGTTGCGttccaaaacaaaaaaatacgtTGAACGTGGATCTAAAGGAGAAAAACCTGAATCTTCTTGGGTGTACTTTAAGCAAGAATCATATAATTTCGAGTGTGGAACAATTAAAAAGACCTCGAAAAAAAGTGAGAATCTTGAAGAAGTGACTCCTGGTGAATATTATGCTTCCGTTTTTAgaCAGTCAAGATTGACATCTAAGcaagaaattacaaatttagaATCTCAGGATCACACCTACGGAATAAAAATGAACTACCACTTCGCTGAGAACCAACTCGGTTCTATGACACCGACAATGTTTCACAATTATTCCTCCAATCAAATAACCGACATCAACGACCTCAGAAAAATTACTCCTAGAGTCAAGCTTTTGAATCAGGAATCGCCAACACTCCATCCAgtcaaaaaagtaaattccCCCCTCAAATTAATCGATCAGAAATCGGACTCCACAAAACAGGCACTGAGAAAATATTGTCGTACTTGCGCTGAAGTAAAATTTCCTCTCATTGATATTTTTAGCGAGAAGGGCATTCAGATGAAACTCAACCAGCAGATTCGTCACCtagaaaatcttaaagaatCCGACTCCCTCTCAACTCTAATGTGCATGGATTGTATCTGTGACTTAAGAATGAGTTACACTTTCTTCATGCAGATTAAAAAAGCAGAGAACAAATTGAAGTCAATCCAGGCGAAGTTACTCGAGGCAGAGACGGCGAATTTAAAGAACCAAGTGGAAGTTCCTACAATTGATCCTCTTTTCATTCCACACgttcctgaaaattcaaatgacaACGGCCCTCGAATTTCTGCGGTTTATTCTGCTCAAGACCCTCAAAGCTGGGAATCAGATCCACTTTCTAATGTTAAAATAGAGCCTCAAGCTCAGGAAGAGAACAAAATTCAGAGTGATGACGATTCCCTCGAGGAATTTGATCCTGAAGATCCTCCTTATAATCCTGAGactgaagaagaagaaaatacaGAAGAAGAAGTGATAATTGCTCCAAGTTTTATGAagagtcaaaaaaaattagaagtgAAGAGTCTCGTAAACAAAGAAGCAGAGAAAAGAGAGATTGAAAGCGAGAGtttgaagagaaaattatCCGAGGAAAGAAACGAGGCTGTGGATAGATTGTCCAAGCTGAAAGCGATTGGACCGAAAGATGCGAAGATTAGGAGGTTGAACGTAAATGAGgctttgaatataaaaaaggagGAGAATGGAGTCATGTATGTTACAGTTCGAGGCACAAAACCAAATGAACTGCTTTTAGTGAAAGTAAAGAAAATGGAGAAGACTGAAAAAGGTAAAGCTGTCGGTAAGAAAGAAGTTCCGaaagaaaaggagaaagaTCCGTTCACAGATCGAACTTTCGATGCAAAAGGCCAAATTATAGAAGAACAGAtagaagaatataaaaagaagagGGAAAAAGTTCTTGGCGCTTCGGCTCAAAATGAAACGACTGAAGTGTATCGAGGGGAAGTTAGAATCAAGGCCGATGTTCTTAATATAAAGGAAAAGGAAGTCCTTCCTGAAATACTTCATCAGGAAGAAATGGAAATTCTGGAAGAAAGTCTAGATACGAAGGAAAATATAATCCAAGAAGATTTACACCAGGCTATTCTGCCCCAGGCAGTTCAGATCAAACCAATTTTAACCAAGGAGATATTCAAGGAAGTTCCAGAGATAAAAAAGGAAGTTGTAGAGGTAAAAAGGGAAGATCCAGAGGGGAGAAAGGAGAAATCGAAGAAGAGCAAGGAACCGAAGCCGAAAGTTTACAACAACGCAGAGGAATACAATTTTCGGATTGAGACGGTGACGACCAGGTGGGAAGACAAGCAGCGAAAGGATTGGGAAGAAGCAAATCCCGGGGTTGAAAATCCGGTGGACAGATTGAAGAGAGTCTTGGGAGAGGAAAACGAGGGGGCAAatcttcaagaatttcttgagaATCTCCAGCAAAGAAAGATGCTACTGGAGAAATTAAATGACGAAGATATCGTTACCCTCTTCCAAGAGAGAATAAACTCGCAAAAAGTTGTCTCCGAACCGGAAGAAGAAGTGAAGGCAGAAGAGCCTGAGGTTGAACTATTCGAATGTGATTTTTGCTTCATATCTTTTCCATCGAAGGAAGTTATTGAGGAGCACATGAAAATTCACGATACGAAAATTCTTCACTACTGCGAGGATTGTAACGAGGAATTTCCAGTCTTGAGATTGAAGAAAAACCATAATGTGATTTGTATCAGGAAGCTGATTTGCAAGTACTGCGACTTGATGTTGGATTCGAAGGGGAAGAAGAGACAACACGAGCAAAAGCATTGTGACAGTCTCTATGGACAGATTTGCGAATATTGTGGGGAGAAGTTTAAACATCAGGGAACTTTGGATCAGCATGTCAAGTCGAGACACATGGCTTTGGAGAAGGTTTTCCAGTGTCCGAAATGCCCGAAGAAGTTTGCGCTCAAGACGAAACTGAGTTTTCATTTGAAGAGCGTTCATACCTCCTTGAGGGCTTATTTGTGCGAGGATTGTGGAGCGGATTTCAAAAATCCGGCGAGCTTGAGACATCACAGAATTAGGAAGCATCAGCCGACTGGAAACAAGAAGGAATGTCCTGTTTGCAATAAGATGATTCCTTTTTATAGTCTCAGCAAACATATGCACACGCATAAGGCTTACACGATCAAATGTCCGCATTGCACTAAGATGTTCAAGAATACTTCAACGTTGAAACAGCATGTTAGAATTCACGAGGATCAGAGACAGTTTAGatgcGACACCTGCGGCGTTGGATTTAACCGAAGAGACGGCCTTCGACTCCACATGAAGGTCCACGAAAAATCGGATAGTCGAGGCCTGAAAGAGTGTTCCTGCCAAGTATGTGGAGAAAAATTCCCGAATCACTCGATGCTTGTTATTCATCGAAATCGAGTTCACAAGGACGGGAGAAATCACACTTGTACTATTTGCAATAGATCGATGATTTCTGCCCGATCTCTGTCATGGCATTTAGCTCACATCCACAATGAAGCTCTTCCTGGAGTTGTAAAAGAAGAATTAGCTGATGGAGGAGAAACAAAAAGAGTCTGTTGCTTCCACTGcaacaagacttttaaaaccGAAATGATTCTGCGAactcatataaaaaattctcacATGCAGAAGGAACCAGTGAAATGTTTAGATTGTGATTTGACCTTCACGAGTGACGTTAGACTCAGACATCATATGATGGTCACCCATAACAGACTTGAAGGGACTTTGGAGTGTCCACATTGCCCGAAAAGATTTGTGAATCAGCTGAGACTGAAGACTCATATGATTTCACATTCTGAGGATCGACCGTACAAGTGTGAGATTTGTGGATTTAATCTCAAGACCAAAATTCAGTTAATTAAGCATCATCAAAATCGGCACAGCGATGAAAGACCTTTACAATGTCGACATTGCACTTGGAAATGTAAACAgGTTAGCGCCCTTGTTTGCCACGAGAGAACTCACACGAACGAACGTCCTTATGCCTGCAGTGTCTGCAAGCAAAGATTCAAATACCTGGgggataaaaataaacacgAGAGACGTCACGTATCTATGGGAGGTAGCGGATTCAAAAGAGTCGTTACTAGTAGAAGCGCAAAACGATCTCAACCTAAGGAAGATGGCGAGGGCGATTCTTCAATTTCTGACCAGGAACAACTGGTGGAGCAAATggaagaagaaatgaatatgGAAATGGAAGAGAGACTCGTAAATTACGAGATTGATCAGGAAAATGTTAAACTTGAGGATCACGAAGATGTCACGGAAGACGATAATGAGTATTCTAATTACCAACAGgatTATGAAGAAACTTCGAGAGAAGCTTCGGAGGCTGCTGAGGTGATAATGAGTATGGAAGATGGAAGTGTTTACACCGAAGAAGTAACAGCTGAAGATACAGAGCATATAGAGACAACACATATAATTGAAGACGAAATTATAGCAAATGAAATTCTGCAGTCGGGAACTGTTGTTCATATTGAACAGCAAGATGAGGAAGGGAAAATCCAGGTTATTCCTGTCGTTCTTTCAATTCCTGATTTAGCTACAGAAAACACTGAAGTTGATATTGCAACAGCTTCGATTATGTATAATGACGAAGAGTGTAATTAA
Protein Sequence: MKFFKSRLENLILGLKICKGLKKGLNPDPKTVPYPLFRRSSHQTFWIPSSKFPIVPKAQCATEVEAVHFIELVSFEIQIARIFFLKMAMEWLKTVLIIEYAKQSKCISDPEHRRCSSVCHAKYLDLGRYVQRQLAYPVRGAVTTADAKERWERLLKKYLKELKKLRSKTKKYVERGSKGEKPESSWVYFKQESYNFECGTIKKTSKKSENLEEVTPGEYYASVFRQSRLTSKQEITNLESQDHTYGIKMNYHFAENQLGSMTPTMFHNYSSNQITDINDLRKITPRVKLLNQESPTLHPVKKVNSPLKLIDQKSDSTKQALRKYCRTCAEVKFPLIDIFSEKGIQMKLNQQIRHLENLKESDSLSTLMCMDCICDLRMSYTFFMQIKKAENKLKSIQAKLLEAETANLKNQVEVPTIDPLFIPHVPENSNDNGPRISAVYSAQDPQSWESDPLSNVKIEPQAQEENKIQSDDDSLEEFDPEDPPYNPETEEEENTEEEVIIAPSFMKSQKKLEVKSLVNKEAEKREIESESLKRKLSEERNEAVDRLSKLKAIGPKDAKIRRLNVNEALNIKKEENGVMYVTVRGTKPNELLLVKVKKMEKTEKGKAVGKKEVPKEKEKDPFTDRTFDAKGQIIEEQIEEYKKKREKVLGASAQNETTEVYRGEVRIKADVLNIKEKEVLPEILHQEEMEILEESLDTKENIIQEDLHQAILPQAVQIKPILTKEIFKEVPEIKKEVVEVKREDPEGRKEKSKKSKEPKPKVYNNAEEYNFRIETVTTRWEDKQRKDWEEANPGVENPVDRLKRVLGEENEGANLQEFLENLQQRKMLLEKLNDEDIVTLFQERINSQKVVSEPEEEVKAEEPEVELFECDFCFISFPSKEVIEEHMKIHDTKILHYCEDCNEEFPVLRLKKNHNVICIRKLICKYCDLMLDSKGKKRQHEQKHCDSLYGQICEYCGEKFKHQGTLDQHVKSRHMALEKVFQCPKCPKKFALKTKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHQPTGNKKECPVCNKMIPFYSLSKHMHTHKAYTIKCPHCTKMFKNTSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHMKVHEKSDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRNHTCTICNRSMISARSLSWHLAHIHNEALPGVVKEELADGGETKRVCCFHCNKTFKTEMILRTHIKNSHMQKEPVKCLDCDLTFTSDVRLRHHMMVTHNRLEGTLECPHCPKRFVNQLRLKTHMISHSEDRPYKCEICGFNLKTKIQLIKHHQNRHSDERPLQCRHCTWKCKQVSALVCHERTHTNERPYACSVCKQRFKYLGDKNKHERRHVSMGGSGFKRVVTSRSAKRSQPKEDGEGDSSISDQEQLVEQMEEEMNMEMEERLVNYEIDQENVKLEDHEDVTEDDNEYSNYQQDYEETSREASEAAEVIMSMEDGSVYTEEVTAEDTEHIETTHIIEDEIIANEILQSGTVVHIEQQDEEGKIQVIPVVLSIPDLATENTEVDIATASIMYNDEECN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389691;
90% Identity: iTF_01391431;
80% Identity: -