Basic Information

Insect: Synergus gifuensis
Gene Symbol: -
Assembly: GCA_904066015.1
Location: CAJFCO010000146.1:142541-151800[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0032 0.44 11.9 0.4 1 23 721 743 721 743 0.98

2 17 1.7 2.3e+02 3.3 0.5 1 19 749 767 749 768 0.80

3 17 0.43 60 5.2 0.9 2 23 776 797 775 797 0.95

4 17 0.00034 0.048 14.9 1.7 3 23 806 827 805 827 0.97

5 17 0.0051 0.71 11.2 1.5 1 23 834 857 834 857 0.94

6 17 9.2e-05 0.013 16.7 0.7 1 23 863 886 863 886 0.94

7 17 0.15 21 6.6 1.4 2 23 894 914 893 914 0.96

8 17 4.1e-06 0.00057 21.0 3.2 2 23 920 941 919 941 0.97

9 17 6.7e-06 0.00092 20.3 0.3 1 23 947 969 947 969 0.98

10 17 0.0012 0.17 13.2 2.4 2 23 981 1003 980 1003 0.95

11 17 0.051 7.1 8.1 1.1 1 23 1009 1032 1009 1032 0.93

12 17 0.088 12 7.3 5.6 3 23 1055 1076 1053 1076 0.93

13 17 0.001 0.14 13.4 1.1 2 23 1083 1105 1082 1105 0.96

14 17 3.4e-05 0.0047 18.1 1.2 2 23 1113 1134 1112 1134 0.96

15 17 0.00088 0.12 13.6 2.6 1 23 1140 1163 1140 1163 0.96

16 17 6.7 9.2e+02 1.4 6.5 2 23 1170 1191 1169 1191 0.96

17 17 0.0044 0.61 11.4 2.7 1 23 1197 1219 1197 1219 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0032	0.44	11.9	0.4	1	23	721	743	721	743	0.98
2	17	1.7	2.3e+02	3.3	0.5	1	19	749	767	749	768	0.80
3	17	0.43	60	5.2	0.9	2	23	776	797	775	797	0.95
4	17	0.00034	0.048	14.9	1.7	3	23	806	827	805	827	0.97
5	17	0.0051	0.71	11.2	1.5	1	23	834	857	834	857	0.94
6	17	9.2e-05	0.013	16.7	0.7	1	23	863	886	863	886	0.94
7	17	0.15	21	6.6	1.4	2	23	894	914	893	914	0.96
8	17	4.1e-06	0.00057	21.0	3.2	2	23	920	941	919	941	0.97
9	17	6.7e-06	0.00092	20.3	0.3	1	23	947	969	947	969	0.98
10	17	0.0012	0.17	13.2	2.4	2	23	981	1003	980	1003	0.95
11	17	0.051	7.1	8.1	1.1	1	23	1009	1032	1009	1032	0.93
12	17	0.088	12	7.3	5.6	3	23	1055	1076	1053	1076	0.93
13	17	0.001	0.14	13.4	1.1	2	23	1083	1105	1082	1105	0.96
14	17	3.4e-05	0.0047	18.1	1.2	2	23	1113	1134	1112	1134	0.96
15	17	0.00088	0.12	13.6	2.6	1	23	1140	1163	1140	1163	0.96
16	17	6.7	9.2e+02	1.4	6.5	2	23	1170	1191	1169	1191	0.96
17	17	0.0044	0.61	11.4	2.7	1	23	1197	1219	1197	1219	0.98

Sequence Information

Coding Sequence: ATGAATATTTTCAACAATTCTAAAGAATTTAAACGTGTTTCTGTAAACAGTGATAAATTCCACGATATTTCGTCGAATATAAACAATTGCTTTCTAGTTTCAGAAGAATCAAATAATTTCGAGTGTGGAACGATTAAAAAGAACTCGATAAAAAGTGAGAATTTTGAGGAAACGACTCCTGGTGAATATTATGCTTCCGTTTTTAGACAGTCAAGATTGATATCTAAGCAAGGAATTACAAATTTAGAATCTGAGGATCACACTTACGGAATAAAAATGAACTACCACTTCGCAGCGAACCAACTCGGTTCTGTGACACCGACTGTGTTTCACAATTATTCTTCTTCTCAATCTTTTTTGGAGAAGTCCTCCAATCAAATAACCGACATCAACGACCTCAGAAAAATCACCCCTAGAGTCAAGCTTTTGAATCAAGAATCGCCAACACTACATCCAGTCAAAAAAGTAAATTCCCCATTCAAATTAATCGATCAGAACTCGGACTCGATAAAAAAGGCACTGAAAAAATATTGTCGTACTTGCGCTGAAGTGAAATTTCCTCTCATTGATATTTTTAGCGATAAGGGCCTTCAGATGAAACTCAACCAGCAGATTCGTCACCTAGAAAATATTAAAGAATCCGATTCCCTCTCGACTCTGATGTGCATGGATTGTATCTGTGACTTAAGAATGAGTTACACTTTCTTCATGCAGATTAAAAAAGCAGAGAATAAATTGAAGTCAATCCAGGCGAAATTACTCGAGGCAGAGACGGCGAATTTAAAGAAGCAAGAGGAGAATTCTACAATTGATCCTCTTTTCATTCCAAACGTTCCTGAAAATTTAAATGACAACGGCCCTAGAATTTCTGCGGTATATTCTGCTCAAGACTCCCAAAGCTGGGAGTCAGATCCACTTTTGAATGTTAAAATGGAGCCTCAAATTCAGGAAGAGAACAAGATTCAGAGTGATGACGATTCCTTGGAGGAATTTGATCCTGAAGATCCTCCTTATAATCCTGAGAGTGAAGAGGAAGAGAATACGGAAGAAGAACTGGTAACTGCTCCAAGTTTTGTTAAGAATTCACAAAAATTAGAAGTGAAGAGTGTCGTAGACAAAGAAGCAGAGAAAAAAGAAATTGAAAGCGAGAGTTTGAAGAGAAAATTATCCGAGGAAAGAAACGAGGCTGTGGATAGATTGTCGAAGTTGAAAGCGATTGGACCGAAAGATGCGAAGATTAGGAAGTTGAACGTAAATGAGGCTTTAAATATAAAAAAGGAGGAGAATGGAGTCATGTATGTTACAGTTCGAGGCACAAAACCAAATGAACTGCTTTTAGTGAAAGTAAAGAAAATGGAGAAGACTGAAAAAGGTAAAGCTGTCGGTAAGAAAGAAGTTTCGAAAGAAAAGGAGAAAGATCCGTTTACAGATCGATCTTTCGATGAAAAAGGCCAAATAATAGAAGAACAGATAGAAGAATATAAAAAGAAGAGGGAGAAAATTCTTGGCGCTTCGGCTCAAAATGATGCGACTGAAGTGTATCGAGGGGAAGTTAAAATCAAGAACAATGTTCTTAATTTAAAGGAAAAGGAAGACTTTTCTGAAATACTTCATCAGGAAGAAATGGAAATTCTGGACGAAAGTCTAGATACAAAGGAAAATATAATCCGAGAAGATTTACACCAGGTTATTCTGCCCAAGGAAGTTCAGATCAAGCCAATTTTAACCAAGGAGATATTCAAGGAAGTTCCAGAGATAAAAAAGGAAGTTGTAGAGATAAAAAGGGAAGATTCAGAGATGAGAAAGGAGAAATCGAAGAAGAGCAAAGAACCGAAGCCGAAAGTTTATAGCAATCCGGAAGAATACAATTTTCGGATTGAGACGGTAAAGACCAAATGGGAAGACAAGCAGCGAAAGGATTGGGAAGAAGCACATCCCGGGGTTGAAAATCCGGTGGATAGATTGAAGAGAGTTTTGGGGGAGGCGAACGAGGGGGCAAATCTTCAAGAATTTCTTGAGAATCTCCAGCAAAGAAAGATGATACTGGAGAAATTAAATGACGAAGATATCGTTACCCTTTTCCAACAGAGAATCAACTCTCAGAAAGTTGTATCTGAACCGGAAGAAGAAGTGATGGTAGAAGAGCCTGAGGTTGAACTATTCGAATGTGATTTTTGCTTCATATCTTTTACATCGAAGGAAGTTATTGAGGAGCATATGAAGATTCACGATACGAAAATTCTTCACTACTGCGAGGACTGTAACGAGGAATTTCCGGTCTTGAGATTGAAGAAAAATCACAATGTGATTTGCATCAGGAAGCTGATTTGCAAGTACTGCGACTTGATGTTGGATTCGAAGGGGAAGAAGAGACAACACGAGCAAAAGCATTGTGACAGTCTCTATGGACAGCTTTGCGAATATTGTGGGGAGAAATTTAAACATCAGGGAACTTTGGATCAGCATGTCAAGTCGAGACACATGGCTTTGGAGAAGGTTTTCCAGTGTCCGAAGTGTCCGAAGAAGTTTGCCCTCAAGACGAAACTGAGTTTTCATTTGAAGAGTGTTCATACCTCCTTGAGGGCTTATTTGTGCGAGGACTGTGGAGCAGATTTTAAAAATCCGGCGAGCTTGAGACATCACAGAATTAGAAAGCATCAGCCGACTGGAAACAAGAAGGAATGTCCTGTTTGCAATAAGATGATTCCTTTTTATAGTCTCAGCAAACACATGCACACACATAAGGCTTACACGATCAAGTGTCCGCATTGCACTAAGATGTTCAAGAATACTTCAACGCTGAAACAACATGTCAGAATTCATGAGGATCAGAGACAGTTTAGATGCGACACTTGCGGCGTTGGATTCAACCGAAGAGACGGCCTTCGACTCCACATGAAGGTCCACGAAAAATCGGACAGTCGAGGCCTAAAAGAGTGTTCCTGCCAACTATGTGGAGAAAAATTCCCGAATCACTCGATGCTTGTCATCCATCGAAATCGTGTTCACAAGGACGGGAGAAATCACACTTGTACTATTTGTAATAGATCGATGATTTCTGCCCGATCTCTATCATGGCATTTAGCTCATATTCACAATGAAGCTCTTCCTGGAGTCGTAAAGGAAGAATTGGCTGATGGAGGGGAAACAAAAAGAGTCTGTTGCTTCCACTGCAACAAGACTTTTAAAACTGAAATGATTCTGCGAACTCATATCAAAAATTCTCACATGCAGAAGGAACCAGTGAAGTGTTTAGATTGCGATTTGACCTTCACGAGTGACGTTAGACTCAGACATCACATGATGGTCACCCATAACAGACTTGAAGGGACTTTAGAGTGTCCACATTGCCCAAAGAGATTTGTGAATCAGCTGAGACTGAAGACTCATATGATTTCACATTCTGAGGAGCGACCGTACAAGTGTGAGATTTGTGGATTTAATCTCAAGACGAAAATTCAGTTGATTAAGCATCATCAGAATCGGCACAGTGATGAGAGGCCTTTACAGTGTCGACATTGCACTTGGAAATGTAAACAGGTTAGCGCCCTTGTTTGCCACGAAAGAACTCACACGAACGAACGTCCTTATTCCTGCAGTGTCTGCAAGCAGAGATTCAAATACCTGGGGGATAAAAATAAACACGAGAGACGTCACGTATCTATGGGAGGTAGCGGATTCAAGAGAGTTGTTACTAGTAGAAACGCAAAACGATCTCAACCTAAGGAAGATGCTGAGGCTGATTCTTCCATTTCTGACCAGGAACAACTGGTGGAGCAAATGGAAGAAGATATGGATATGGAAATGGAAGAGAGACTCGTAAATTATGAGATTGAGCAGGAAAATGTGAAACTTGAGGATCAGGAAGAGGTCACAGAAGACGATAATGAGTTTTCTAATTACCAACAGGTAATTATGACTGATTACGGACAGGATTATGAAGAAACTTCGAGAGAAGCTTCGGAGGCTGCTGAGGTGATAATGAGTATGGAAGATGGAAATGTTTACACCGAAGAAGTAACAGCTGAAGATACAGAGCATATAGAGACAACACATATAATTGAAGACGAAATTATAGCGAATGAAATTCTTCAGTCGGGAACTGTTGTTCATATTGAACAGCAGGATGAGGAAGGGAAAATTCAGGTTATTCCTGTCGTTCTTTCAATTCCTGATTTAGCTACAGAAAACTCTGAAGTTGATATTGCAACAGCTTCGATTATGTATAATGACGAAGAGTGTAATTAA
Protein Sequence: MNIFNNSKEFKRVSVNSDKFHDISSNINNCFLVSEESNNFECGTIKKNSIKSENFEETTPGEYYASVFRQSRLISKQGITNLESEDHTYGIKMNYHFAANQLGSVTPTVFHNYSSSQSFLEKSSNQITDINDLRKITPRVKLLNQESPTLHPVKKVNSPFKLIDQNSDSIKKALKKYCRTCAEVKFPLIDIFSDKGLQMKLNQQIRHLENIKESDSLSTLMCMDCICDLRMSYTFFMQIKKAENKLKSIQAKLLEAETANLKKQEENSTIDPLFIPNVPENLNDNGPRISAVYSAQDSQSWESDPLLNVKMEPQIQEENKIQSDDDSLEEFDPEDPPYNPESEEEENTEEELVTAPSFVKNSQKLEVKSVVDKEAEKKEIESESLKRKLSEERNEAVDRLSKLKAIGPKDAKIRKLNVNEALNIKKEENGVMYVTVRGTKPNELLLVKVKKMEKTEKGKAVGKKEVSKEKEKDPFTDRSFDEKGQIIEEQIEEYKKKREKILGASAQNDATEVYRGEVKIKNNVLNLKEKEDFSEILHQEEMEILDESLDTKENIIREDLHQVILPKEVQIKPILTKEIFKEVPEIKKEVVEIKREDSEMRKEKSKKSKEPKPKVYSNPEEYNFRIETVKTKWEDKQRKDWEEAHPGVENPVDRLKRVLGEANEGANLQEFLENLQQRKMILEKLNDEDIVTLFQQRINSQKVVSEPEEEVMVEEPEVELFECDFCFISFTSKEVIEEHMKIHDTKILHYCEDCNEEFPVLRLKKNHNVICIRKLICKYCDLMLDSKGKKRQHEQKHCDSLYGQLCEYCGEKFKHQGTLDQHVKSRHMALEKVFQCPKCPKKFALKTKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHQPTGNKKECPVCNKMIPFYSLSKHMHTHKAYTIKCPHCTKMFKNTSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHMKVHEKSDSRGLKECSCQLCGEKFPNHSMLVIHRNRVHKDGRNHTCTICNRSMISARSLSWHLAHIHNEALPGVVKEELADGGETKRVCCFHCNKTFKTEMILRTHIKNSHMQKEPVKCLDCDLTFTSDVRLRHHMMVTHNRLEGTLECPHCPKRFVNQLRLKTHMISHSEERPYKCEICGFNLKTKIQLIKHHQNRHSDERPLQCRHCTWKCKQVSALVCHERTHTNERPYSCSVCKQRFKYLGDKNKHERRHVSMGGSGFKRVVTSRNAKRSQPKEDAEADSSISDQEQLVEQMEEDMDMEMEERLVNYEIEQENVKLEDQEEVTEDDNEFSNYQQVIMTDYGQDYEETSREASEAAEVIMSMEDGNVYTEEVTAEDTEHIETTHIIEDEIIANEILQSGTVVHIEQQDEEGKIQVIPVVLSIPDLATENSEVDIATASIMYNDEECN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389691;
90% Identity: iTF_01391431;
80% Identity: -