Basic Information

Insect: Stenurella melanura
Gene Symbol: Zfpm1
Assembly: GCA_963583905.1
Location: OY757313.1:76165285-76168395[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.1 15 8.5 0.3 1 20 555 574 555 578 0.89

2 14 0.032 4.5 10.1 0.1 2 23 656 678 655 678 0.92

3 14 0.0011 0.15 14.8 1.1 1 23 686 708 686 708 0.98

4 14 0.011 1.6 11.6 3.1 2 23 711 732 710 732 0.97

5 14 0.045 6.4 9.7 2.8 1 23 738 760 738 760 0.82

6 14 0.00021 0.03 17.0 5.1 2 23 767 788 766 789 0.95

7 14 0.81 1.2e+02 5.7 1.1 5 23 802 820 801 820 0.95

8 14 0.00014 0.019 17.6 2.3 3 23 827 848 826 848 0.97

9 14 0.065 9.2 9.2 0.1 2 23 864 884 863 884 0.96

10 14 0.00038 0.054 16.2 1.4 1 20 890 909 890 912 0.92

11 14 0.00089 0.13 15.0 0.1 1 23 920 942 920 942 0.99

12 14 0.0024 0.34 13.7 2.9 1 23 948 970 948 970 0.97

13 14 1.4e-06 0.0002 23.8 3.5 1 23 976 998 976 998 0.98

14 14 0.0031 0.44 13.3 7.0 1 23 1004 1026 1004 1027 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.1	15	8.5	0.3	1	20	555	574	555	578	0.89
2	14	0.032	4.5	10.1	0.1	2	23	656	678	655	678	0.92
3	14	0.0011	0.15	14.8	1.1	1	23	686	708	686	708	0.98
4	14	0.011	1.6	11.6	3.1	2	23	711	732	710	732	0.97
5	14	0.045	6.4	9.7	2.8	1	23	738	760	738	760	0.82
6	14	0.00021	0.03	17.0	5.1	2	23	767	788	766	789	0.95
7	14	0.81	1.2e+02	5.7	1.1	5	23	802	820	801	820	0.95
8	14	0.00014	0.019	17.6	2.3	3	23	827	848	826	848	0.97
9	14	0.065	9.2	9.2	0.1	2	23	864	884	863	884	0.96
10	14	0.00038	0.054	16.2	1.4	1	20	890	909	890	912	0.92
11	14	0.00089	0.13	15.0	0.1	1	23	920	942	920	942	0.99
12	14	0.0024	0.34	13.7	2.9	1	23	948	970	948	970	0.97
13	14	1.4e-06	0.0002	23.8	3.5	1	23	976	998	976	998	0.98
14	14	0.0031	0.44	13.3	7.0	1	23	1004	1026	1004	1027	0.96

Sequence Information

Coding Sequence: ATGGATTCAACTAACATCATTTGCCCTGTTTGTACCTTATATCTAAGGCCCGGCATTACTTTAAAACAGCATTTATCTTCACATCCCAAACAGAAAGTAATAGAAGCCTTGGTAAAGTTATCTGGAGGTGAGGAAACACAAAAAGTGCAAAATGTAGCTCCTCAGTCAGATATAAGTGCTGCTGGCAGCTCGCAAGTTAACTCGGCTATAGTCAATCAATCATGGAATCAACCCCCTCATGGTCAACTGGGACCCCCACCTCCCATAAACCCCATACATGGAAACCATGTATTTATATATCAACAAAGTATGAGTACAACTTCACCTCAACCAAACGTATTAAACGTAAACCCACTGTCACAGCAATATGTTTATCCGACGGTTTTCAATCCCCAAATGATGCCATATGTTTATCAACAACAGCAAGTTATAATGTCTAGTAATTCTTTGCCTCCTCATATGAGAGCACTTCCTTTTGAATTACCTAGTACATCTCAATCAAACGTACCAGAGGAGACAGTTCAAAATGAAAGTGAGAATATCCAGTTGGAAGATAGTCGAATTGTCGAGGTCCAAGATAGTAATGAAGAATCTGTTCAACATGAAGAAACACTTGACAAAGAAAATTTTGCTGCTAAAACTTCCGATGAACCTACAACAATTAAAAAACAGGAAATAATTGATGTGTGCAATGATGTGAAAACTATGGAAGATTTTGAAAATGCACAACTGGTTCTTAATGAAATACCATCTGAAGGTTACAATAATGAAAGCAACGAAGATTACGATCACGATCATGTTGATCACGAAGAGTGTATTGGTTCACCACATTCTCGTTCAAATTCAGATTGGGGATTTCATTCAGATTTAAACAAGGCATGTCAAACGCAAATTACCACTAACACCTCACCTAGATCTCAGATTTTAGAAGACGAAGAAGTTCTTGGAGATAATCAGGATAACCATGAAGATCAGCCTGAGTATTTCTATATTAATGGACATAATATTAACGGACATAATCAGGAATATATGAAGCACCAAAATGAAGAACAGCAGAATAACATTATACCATACTCTACAGTAAAGGTAAATACAGATACTTATGAGCAATCTGATCCAATCTATACTTCAGCCAATATATTACATGGTGGTGATCAATTAGATTTTGTCAATATGGATGATATCGTTATTATAAGTGATTTTTCTACGAATCAAGTAATTTCACaggtagaaaattttgaaaatacgtcACCTGATAGACCAGGAGTATTAATGACCATCGGAGATATTGTAGATCAGCCAAAAAATGATTTTATCGAACAGAGAGATTTAGAAGAAAGCATGTCAAGGGAAAGTTCACACGTGAACATAAGGTCCGATGAAAGAATGCCAGCACGTGGTGAATTGTCTGGACAGGAAAGTATTGGAGGTGCTAGTGATATAACATGGAATCGAATGCAGTATCAAGAGGGTAGTTCAGGCATATCTCATTCTTATGATCTAATTGGGCGAGAAACTTGGGAAGCTTCTGACAGCGACAGCGTAGAAGTACCAACATTGCAAAGACGACTTCCAATGCAGTTGGATTACCAGCAAAATGAATTTAACGATAATGAAAATGATACGCCTACCATTGTCAGCTACTCTGGGCCGCCTTTAAATTTCAAATGCCCAGTTTGTGGAGATGGTTTCTCTAGTTCAaaggaaagaaaagaacatgAGGTTGAGAAGCATCCAGagaaaactattaaaaataatgtaataggATCTGAGATTggaaaaagaaaagttaaaaagcTTGTGGTGAAGTTCAAATCTGATAAGACTGAGagcgaaaataattttgataacGTATTTACCAATAAGTTAAAGTTGGAGAGTACTACTGAAGCACAAGCAAATGTAGCAGTTGACAATCAGATTAAAGTGGAtgatattaatttagaattaaaaGATTTGAAAACTGTTTGTCCAATTTGTGATTGCGTTGTTGAAAATGCCAAGGctttaaaagtacataaattggAGGTTCATAAGGAAAGTGCGGATGTAAGGCATAAATGTTTGACATGTGGTGAAGCATTTCCAAATGAGTATAAATATACAGAACACCTTAAAATACATCCTCTGGAATGTAGGTTATGTGGCAAGCTGTTTTATAGACGTCAAAATATTCACTTACACATGAAAAGGCATCTTGGGTTGAAGCCGTATAAATGTGAAATCTGTCAGAAGTCATTTGTAACTAAACAAAAACATGACGAACATAAAAATATTCACACCGGTGAGGCCCCTATTAAATGTAACTTGTGTGAAGAAACATTTAGAAGACATTCAAACTTAGTACAGCACCGTAACCGTCATCATTTTCAAATGAAAAAGAAAGTCAAAGATTATATCTGTCAGTGTGgagaaatttttcattctaaaaaaaaACTAGCATGGCATAAAGAAATTCATGACTCTAAACCCAAGGCCTGTACCCAATGTAGTGAAAAGTTTGTCCATATGTCAAGTTTGACAAGGCATATGCGTCGTGCTCATAATGAAAAGTTTCTGCCACAAGTAGATAGAGACAATGAAAATGTGGAGTGTCCTATATGCAAAGGAACTTACTTAAGATCTTCTCTTGAAGTACACATTCGAAACCATAGTGGACAAAGGCCATTCACTTGTTTGATTTGCAACAAAGATTTCACCACCAAATGGAATCTTAAATTACACAAGTGGACACATGCTAGTCGTACTTCAAAACCCTTCAAATGTGACCAGTGCAAGGGTGCATTCATTAGGGAAGCTGATTACATAGCGCACATGAACTCTCACAAAAGTGTGCGTCCTTATACATGTAATTATTGTGGGGCTCAGTTTATTAGAAAGTATAACTGCATAAGACACGTTAAAGAGCATGAAAACAACAAGACATTCAGTTGTCAGGTTTGTGGAAAGTCCTTCCATAGATCATATTATTTAAAAGATCACATGCGTGTACATAGCGGTATTCGACCTTACTCATGTCATATTTGTGGAAAAACTTCCACAACTAAGTCTAATCACAATAAACATGTACAAATTCATCATGCTAGAGAACCAGTCAGTACAGAAAATTAA
Protein Sequence: MDSTNIICPVCTLYLRPGITLKQHLSSHPKQKVIEALVKLSGGEETQKVQNVAPQSDISAAGSSQVNSAIVNQSWNQPPHGQLGPPPPINPIHGNHVFIYQQSMSTTSPQPNVLNVNPLSQQYVYPTVFNPQMMPYVYQQQQVIMSSNSLPPHMRALPFELPSTSQSNVPEETVQNESENIQLEDSRIVEVQDSNEESVQHEETLDKENFAAKTSDEPTTIKKQEIIDVCNDVKTMEDFENAQLVLNEIPSEGYNNESNEDYDHDHVDHEECIGSPHSRSNSDWGFHSDLNKACQTQITTNTSPRSQILEDEEVLGDNQDNHEDQPEYFYINGHNINGHNQEYMKHQNEEQQNNIIPYSTVKVNTDTYEQSDPIYTSANILHGGDQLDFVNMDDIVIISDFSTNQVISQVENFENTSPDRPGVLMTIGDIVDQPKNDFIEQRDLEESMSRESSHVNIRSDERMPARGELSGQESIGGASDITWNRMQYQEGSSGISHSYDLIGRETWEASDSDSVEVPTLQRRLPMQLDYQQNEFNDNENDTPTIVSYSGPPLNFKCPVCGDGFSSSKERKEHEVEKHPEKTIKNNVIGSEIGKRKVKKLVVKFKSDKTESENNFDNVFTNKLKLESTTEAQANVAVDNQIKVDDINLELKDLKTVCPICDCVVENAKALKVHKLEVHKESADVRHKCLTCGEAFPNEYKYTEHLKIHPLECRLCGKLFYRRQNIHLHMKRHLGLKPYKCEICQKSFVTKQKHDEHKNIHTGEAPIKCNLCEETFRRHSNLVQHRNRHHFQMKKKVKDYICQCGEIFHSKKKLAWHKEIHDSKPKACTQCSEKFVHMSSLTRHMRRAHNEKFLPQVDRDNENVECPICKGTYLRSSLEVHIRNHSGQRPFTCLICNKDFTTKWNLKLHKWTHASRTSKPFKCDQCKGAFIREADYIAHMNSHKSVRPYTCNYCGAQFIRKYNCIRHVKEHENNKTFSCQVCGKSFHRSYYLKDHMRVHSGIRPYSCHICGKTSTTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01290691; iTF_01014916; iTF_00886762; iTF_01296755; iTF_01227623; iTF_00722351; iTF_01310800; iTF_00110813;
90% Identity: iTF_01290691; iTF_00886762; iTF_01296755;
80% Identity: -