Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: Zfpm1
Assembly: GCA_000390285.2
Location: NW:377626-382194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.8 1.8e+02 2.6 0.1 2 23 7 28 6 28 0.92

2 15 0.027 0.84 9.9 0.4 1 23 550 573 550 573 0.90

3 15 0.031 0.96 9.8 0.1 2 23 653 675 652 675 0.93

4 15 0.00077 0.024 14.8 1.1 1 23 683 705 683 705 0.98

5 15 0.00087 0.027 14.7 1.4 2 23 708 729 707 729 0.97

6 15 0.043 1.3 9.3 2.5 1 23 735 757 735 757 0.80

7 15 0.00016 0.0048 17.0 5.1 2 23 764 785 763 786 0.95

8 15 0.6 18 5.7 1.1 5 23 799 817 798 817 0.95

9 15 9.9e-05 0.0031 17.6 2.3 3 23 824 845 823 845 0.97

10 15 0.015 0.46 10.8 0.2 2 23 861 881 860 881 0.97

11 15 0.00028 0.0086 16.2 1.4 1 20 887 906 887 909 0.92

12 15 0.00018 0.0056 16.8 0.2 1 23 917 939 917 939 0.99

13 15 0.0017 0.054 13.7 2.9 1 23 945 967 945 967 0.97

14 15 1.9e-06 5.8e-05 23.0 2.2 1 23 973 995 973 995 0.98

15 15 0.0023 0.07 13.3 7.0 1 23 1001 1023 1001 1024 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.8	1.8e+02	2.6	0.1	2	23	7	28	6	28	0.92
2	15	0.027	0.84	9.9	0.4	1	23	550	573	550	573	0.90
3	15	0.031	0.96	9.8	0.1	2	23	653	675	652	675	0.93
4	15	0.00077	0.024	14.8	1.1	1	23	683	705	683	705	0.98
5	15	0.00087	0.027	14.7	1.4	2	23	708	729	707	729	0.97
6	15	0.043	1.3	9.3	2.5	1	23	735	757	735	757	0.80
7	15	0.00016	0.0048	17.0	5.1	2	23	764	785	763	786	0.95
8	15	0.6	18	5.7	1.1	5	23	799	817	798	817	0.95
9	15	9.9e-05	0.0031	17.6	2.3	3	23	824	845	823	845	0.97
10	15	0.015	0.46	10.8	0.2	2	23	861	881	860	881	0.97
11	15	0.00028	0.0086	16.2	1.4	1	20	887	906	887	909	0.92
12	15	0.00018	0.0056	16.8	0.2	1	23	917	939	917	939	0.99
13	15	0.0017	0.054	13.7	2.9	1	23	945	967	945	967	0.97
14	15	1.9e-06	5.8e-05	23.0	2.2	1	23	973	995	973	995	0.98
15	15	0.0023	0.07	13.3	7.0	1	23	1001	1023	1001	1024	0.96

Sequence Information

Coding Sequence: ATGGACTCAACCAACATTGTTTGTCCAGTTTGTACCTTGTATCTAAGGCCAGGAATAACCTTAAAGCAACATTTATCCTCCCATCCAAAGCAGAAGGTAATAGAGGCCTTGGTAAAGTTATCTGTGGGTGAAGAGTCACCTAAAGGTCAAAATATACCCACACAGCCAGATTTAAGTGCTGCTGGCAGTTCTCAGGTTAACTCGGCTATAGTGAACCAGTCATGGAATCAAGCACCTCCAGGTCACTTAGGGCCCACGCCCCACATAACCCCACTACATGGAAACCATGTTTTTATCTATCAACAAAGTATGAGCACAACTTCTCCTCAGCcaaatgttttaaatgtaaacccGTTGTCACAGCAATACGTTTATCCCACCGTTTTCAACCCCCAAATGATGCCATATGTCTATCAGCAACAGCAAGTAATAATGTCTAGTAATTCGTTGCCTCCTCATGTAAGGGCTTTACCTTTTGATTTACCTAGTACATCGCAAGCTAATATACCCGAAGAATCGGTCGAGAATGGaagtgaaaataatattacacaAAGTAGAATAGAGGAAATCCAGGAGAATACAGGGGATTCGAGACATGAAGAAATTGTCAAGGATACTTTCAGTGGAACACCTACAGAACCCACAACTGTTAAGAAGCAAGAAGACATGGATATAGTCAGTCATGATGTGAAAACTATGGAAGATTTTGAAAACGAACAGTTAATGGTGAACGAAATACCATCGGAAGAGTACGGTGGTAATGAAAACAATGCGGATTATGAACACGAACAAGTGGATCACGAAGAGTGTATTGGTTCCCCACATTCTCAGACTACCACTCATTCTGACTGGGCATTTCACTCCGATTTGAACAAGGCTTGCCAAACCCAGAATACCAGTAACACTTCACCTCGTTCACATACATTAGAAGATGAAGAAGCAAATTTAGATAATCAAGAAAACAATGAAGATCAGCCCGAATACTTTTATATCCACCAACAGAACCAGGAATTTGTAAAAACTCAAGAGTATACCGAACAGAATGTTATACCGTATACAACGGTTAAACTAAATACGGAAAGTTACGAACAGTCAGAACCAATTTATACTTCTGCAAACATCCTGCACGGTGGGGACCATTTAGATTTTGTTAACATGGAAGATATCGTTATCATAAATGATTTCTCTTCAAATCAGGTTATTtctcaagttgaaaattttgagaACACCTCACCAGACAGACCAGGAGTTTTAATGACTATAGGAGATATCACCGAGCAGCCAAAAAATGATTTCATTGAGCAGAGTCACCTGGAGGAGAGTATGTCAAGAGAGAGCTCTCACGTTAACATAAGATCTGATGAAAGGATGCCAGCAAGAGGCGAATTGTCTGGTCAGGAGAGTATAGGGGGTGCTAGTGACATAACTTGGAATCGTATGCAGTACCAAGAAGGTAGTTCGGGGATGTCACACTCTTATGATTTAATCGGAAGGGAGACTTGGGAGGCAtccgatagtgacagtgtagaAGTGCCAGCAATCCAGAGGAGACATCCAGCACAAGGGGAGTATCAAAATCATATGGAGTATAACGACAATGAAAATGACACTCCTACGATCGTTAGTTATTCTGGACCACCGCTTAATTTTAAATGCCCCACATGTCAGGAAGGTTTTGCATCGTCAAAAGAAAGAAAGGAGCATGAGATCGAGAAAcatccagaaaaaataaatagaagcaATTTCATTGGAGGCGATATTGCTTCCAAGGTAAAGAAGGTGAAAAAACTTATAGTAAAGTTAAAATCAGATAAGACTGAGACCGACAACAATTATGATAACGTTTTTACtaacaaattgaaattagaGAATAATGTCGAACAAAATGAAACTCCACCTGTCGAAACTGATATTAAACAAGACGAGCCCAATTTAGAAGTTAAGGACTTGAAGATAATGTGTCCAATTTGTGACTGTGTGGTAGAAAATGCAAAGGCTTTAAAACTGCATAAAATGGAAGTCCACAAGGAAAATGCCAGCGTACGACACAAATGCCTTACATGCGGGGAGGCTTTTCCTAACGAATATAAATATACGGATCACCTTAAAGTACACCCACTAGAATGCAGGTTATGCGGCAAACTGTTTTATAGAAGACAAAATATTCAGTTGCATATGAAGAGACATCTGGGACTTAAGCCATACAAATgcgaaatttgtcaaaaatctTTCGTAACGAGACAAAAACATGATGAACATAAAAACATTCACACTGGTGAAGCTCCCATCAAATGCAACTTGTGCGAGGAAACATTTAGAAGACACTCGAACTTAGTACAACACCGTAACAGACACCATTTTCAGCTCAAGAAAAAGGTTAAAGATTATATATGTCAGTGTGGAGAAATCTTTcactctaaaaaaaaattagcatgGCACAAGGAAATCCATGACTCTAAGCCTAAGGCGTGCACTCAGTGCAGTGAGAAATTCGTTCATATGTCGAGTTTAACGAGACATATGCGCCGTGCTCATAATGAGAAGTTTCTCCCACAAGTAGAGAGGGATAATGAAAATGTTCAATGCCCCATTTGCAAAGGTACTTATCTCCGATCTTCCCTGGAAGTACATATTCGTAAGCACAGCGGACAGAGGCCTTTCACTTGCTTAATATGCAATAAGGATTTCACGACTAAATGGAACCTTAAATTGCATAAGTGGACGCATGCCAGTCGTACGTCCAAACCCTTCAAGTGCGATCAGTGCAAGGGTGCCTTCATTAGAGAGTCCGACTACATCGCGCACATGAACTCTCACAAAAGCGTACGACCGTATACGTGTAACTACTGCGGTGCTCAGTTCATCAGGAAGTACAACTGCATAAGGCACGTTAAGGAACACGAGAATAACAAGACATTCGTTTGTCAGGTTTGCGGGAAGTCTTTTCACAGGTCATATTACTTAAAGGATCATATGCTTGTACATAGCGGCATTCGACCTTATTCCTGTCATATTTGTGGGAAAACTTCCACGACTAAGTCTAATCACAATAAACATGTACAAATTCATCATGCTAGGGAACCAGTTAGTACAGAAAATTAG
Protein Sequence: MDSTNIVCPVCTLYLRPGITLKQHLSSHPKQKVIEALVKLSVGEESPKGQNIPTQPDLSAAGSSQVNSAIVNQSWNQAPPGHLGPTPHITPLHGNHVFIYQQSMSTTSPQPNVLNVNPLSQQYVYPTVFNPQMMPYVYQQQQVIMSSNSLPPHVRALPFDLPSTSQANIPEESVENGSENNITQSRIEEIQENTGDSRHEEIVKDTFSGTPTEPTTVKKQEDMDIVSHDVKTMEDFENEQLMVNEIPSEEYGGNENNADYEHEQVDHEECIGSPHSQTTTHSDWAFHSDLNKACQTQNTSNTSPRSHTLEDEEANLDNQENNEDQPEYFYIHQQNQEFVKTQEYTEQNVIPYTTVKLNTESYEQSEPIYTSANILHGGDHLDFVNMEDIVIINDFSSNQVISQVENFENTSPDRPGVLMTIGDITEQPKNDFIEQSHLEESMSRESSHVNIRSDERMPARGELSGQESIGGASDITWNRMQYQEGSSGMSHSYDLIGRETWEASDSDSVEVPAIQRRHPAQGEYQNHMEYNDNENDTPTIVSYSGPPLNFKCPTCQEGFASSKERKEHEIEKHPEKINRSNFIGGDIASKVKKVKKLIVKLKSDKTETDNNYDNVFTNKLKLENNVEQNETPPVETDIKQDEPNLEVKDLKIMCPICDCVVENAKALKLHKMEVHKENASVRHKCLTCGEAFPNEYKYTDHLKVHPLECRLCGKLFYRRQNIQLHMKRHLGLKPYKCEICQKSFVTRQKHDEHKNIHTGEAPIKCNLCEETFRRHSNLVQHRNRHHFQLKKKVKDYICQCGEIFHSKKKLAWHKEIHDSKPKACTQCSEKFVHMSSLTRHMRRAHNEKFLPQVERDNENVQCPICKGTYLRSSLEVHIRKHSGQRPFTCLICNKDFTTKWNLKLHKWTHASRTSKPFKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCIRHVKEHENNKTFVCQVCGKSFHRSYYLKDHMLVHSGIRPYSCHICGKTSTTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01370122;
90% Identity: iTF_01014916;
80% Identity: -