Sbip020626.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- clz9
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000812.1:862350-864809[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-09 5.2e-07 30.5 0.0 1 36 10 45 10 49 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAAAAGAAACGCAAGTGTTATACTAATGCCCAAGTGGCTGAAGCCCTTTTATCAATTCGACAAGGTATGAGTATTTACAAAGCCTCGAGACAGTATAATGTACCAGAGACTACATTACGGAGTAAACGAGACGAGCTTTACGAAAATGAACGTTGTGGTAAGCAACCAGTACTCACCCTTAACGAAGAGAGACAAATTGTTGATTGGATTCATTATCTTGGTAAATGTGGCTTTCCAGTTTCTAAAAATCAATTATTACACACTGTCTCTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCTTTTAAAGATGGAGTTCCTGGAAAGAAATGGTTTTCAGGGTTTATGCTACGACATCCAGCATTGTCAAAACGTGTGGCACAAAATCTTCCAACGAGTAGAAACCAAGTCACGGAAGATGCATTGCGAGCGTGGTTTGATAGAGTAGGATCATATTTTAAAGAAAACGATTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACAGGGTTTTTTCTTTGTCCAAAAGAGAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATATAATCGCGTTGCAAATGATGAGAAAGAATGTTTGACCGTATTAGTCAATGTATCAGCAGATGGTAATGTAGCTCCGCCAATGGTACTTTTTCCATACAAGAGGCTACCTGTTAACATCAAGTCAACGGTTCCTTCGAGGTGGGGACTTGGCAACACCGAATCAGGCTGGATGAATATGGAGTCCTTCTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACAACAGGAAATAACTCTGCCCGTTGTTTTATTTTTAGATGGCCATAGCTCTCATATATCTCTGCCTTTAACAACTTTTTGCAAGGAAAAAGGGATTGTACTAGTTGCTTTGCTCCCAAATTCAACGCACGTCTTGCAGCCTCTTGATGTCGCCGTTTTCAGGCCTGTTAAGGGAACATGGCGGGATATTGTGAGGGAATTCAGAGTTAAACATAATTATGCGAAGCTTAAGCGCACAGACTTTTGTACAGAAGTACAAAAATGTTTTGACAGAAGCCTCAAGCCTGAAACAATAATGAGCGGATTTAAATGCTGTGGACTTTACCCGTTTGATGAACAAAATATTGATTATAATATACTTTTGACAAAAGTGAAGAAACACCAAGGAAAACTATCGGAAGCCAATCAAAACACTGAATTAAATACTCAACAGATGAGCAATATAGATAACAATGAGCAGTTCAGGAAACAATTTGAAAATCGATTGTCACAAAATACATTAAATTCATTTAAAGAGGCAGGAAACCAGTGGACAGGTGACCCCAGTTATGAAAAACTATTTTTATTCTGGAAAAGTCTTACATCATCGGAAAGCATATTTGAAGATCAAGCAGACTCTGCTCTAGATATTGGGGAGACAACCTTTACCAATAATGTCGACATAGAAAATGTTTCTAATTCCATAAACTTTGATATTAGATCGGATGGTATTCTAACCCCACTTAATTATAACGAAGGTAACGATATCGAAAAGGTCACACCAAAGTCATCGCAAGTGTCACTGTCATCAATGAATGTGGTTCCATCAATCGAAGGAAATACACTTGAAGCAATTTCTCTTCTACCGACACCATTGGTTGATTCACCTGTATTAATAGAGATTATTGATCAGAGGCAATCAGAAGTTACACCACCACAGAAGACACAATTATTGACAGAAGAAAAAGCTCAACAAATATTACGTTCATCGACTCCTGAATTAAGTAAGTGTTCTAGTACCGCTCCATCATTCTCTGAAATAACGAACGATCTACGTTCGTATGAAGTTAATAGTTGCTCTCCTTCCTTAAGTCCACGTCCAAATATAATGCAAAAAAAAATGCTGATAGACAAGTATTCGGAAGAAAAATCTTTAATAATGCCTAGTACAAGCAAAGCTCCCACGCCAATAATTATTGAAAATGTCACGCCGCCGACCCCATTTAAAGGAATACCTACGCCTTTCAAAAATGCATTTTTTTTTCCAAAAACCGAGAATACTCCCCAAACCAAAAAACACACTAAAAAGGTAACTCCCACCGTAGCTACTGCAGCAGAATTCATAGAACACCAAAGAAGGTTAGACAAAGAGAAAGAAGAAAAAGAAAAACTTAAAATACTGCGAAAATGTAAGGCATTAGAAAAAAAAAGACAAAAAGAAAACGATAAAAAGATAAAACAAGCACAAATTGAAAAGAAAAAAGAAGAATGGAAAAAAAGTTTAATGAAGAAATCAAAAAATGAAAATATGTGTCACGTCAATACAATAGATAAAAAATCAATCCAAAACTCTTCGGACAGTGAAGATGATTTTATTCTTAACATTCCTGCAAAGACAATTAAACGCTTTAACTTCCTAGATTCAGATTCAGAAGATTCTTTTTAA
- Protein Sequence
- MEKKKRKCYTNAQVAEALLSIRQGMSIYKASRQYNVPETTLRSKRDELYENERCGKQPVLTLNEERQIVDWIHYLGKCGFPVSKNQLLHTVSKLVENLQRPNPFKDGVPGKKWFSGFMLRHPALSKRVAQNLPTSRNQVTEDALRAWFDRVGSYFKENDLLQVLQDPKRIFNCDETGFFLCPKEKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNVAPPMVLFPYKRLPVNIKSTVPSRWGLGNTESGWMNMESFYEYVANVFYPWLQQQEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRVKHNYAKLKRTDFCTEVQKCFDRSLKPETIMSGFKCCGLYPFDEQNIDYNILLTKVKKHQGKLSEANQNTELNTQQMSNIDNNEQFRKQFENRLSQNTLNSFKEAGNQWTGDPSYEKLFLFWKSLTSSESIFEDQADSALDIGETTFTNNVDIENVSNSINFDIRSDGILTPLNYNEGNDIEKVTPKSSQVSLSSMNVVPSIEGNTLEAISLLPTPLVDSPVLIEIIDQRQSEVTPPQKTQLLTEEKAQQILRSSTPELSKCSSTAPSFSEITNDLRSYEVNSCSPSLSPRPNIMQKKMLIDKYSEEKSLIMPSTSKAPTPIIIENVTPPTPFKGIPTPFKNAFFFPKTENTPQTKKHTKKVTPTVATAAEFIEHQRRLDKEKEEKEKLKILRKCKALEKKRQKENDKKIKQAQIEKKKEEWKKSLMKKSKNENMCHVNTIDKKSIQNSSDSEDDFILNIPAKTIKRFNFLDSDSEDSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01367713; iTF_01367710; iTF_01367711; iTF_00931204; iTF_00794353; iTF_00794343; iTF_00794344; iTF_00794352; iTF_00794348; iTF_00794349; iTF_00072723; iTF_00072721; iTF_00072722; iTF_00667320; iTF_01367704; iTF_01367717; iTF_00967961; iTF_00012897; iTF_00012898; iTF_00012899; iTF_01076356; iTF_01076357; iTF_01152037; iTF_00640230; iTF_01152039; iTF_01152040; iTF_01152043; iTF_00640216; iTF_00640217; iTF_00640218; iTF_01152032; iTF_01152031;
- 90% Identity
- iTF_01367711; iTF_01367713; iTF_01367710;
- 80% Identity
- -