Htar022379.1
Basic Information
- Insect
- Herminia tarsipennalis
- Gene Symbol
- clz9
- Assembly
- GCA_945859575.2
- Location
- OX243846.1:15036500-15038614[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-10 1.1e-07 32.5 0.1 1 36 10 45 10 48 0.92
Sequence Information
- Coding Sequence
- ATGGACAGAAAGAAACGCAAATGTTATACTAATGCCCAAGTGGCTGAAGCACTTTCATCAATTCGACAAGGTATGAGTATTTACAAAGCCTCGAGACAGTATAATGTACCAGAGACTACATTACGGAGTAAACGAGATGAACTTTACGAGAACGAACATTGTGGTAAGCAACCAGTACTTAACCTAAACGAAGAGAAACAAATCGTTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTGACTAAAGATCAATTATTACACACTGTCTCTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGATGGAGTTCCTGGAAAAAAATGGTTTTCAGGGTTTATGCTACGACATCCAGCAGTCTCAAAACGTGTGGCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCGTGGTTTGATAGAGTAGGATCATATTTTAAAGAAAACGATTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAGGTTTTGGTAAAAAAGGGTAGTAAACGAGTATATAATCGCGTTGCAAATGACGAAAAAGAATGCTTGACCGTATTAGTCAATGTGTCAGCAGATGGTAATGTAGCTCCGCCAATGGTACTTTTCCCTTACAAGAGGCTACCTAACAACATCAAGTCAACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCAGGCTGGATGAACATGGAGTCATTCTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACAACAGGAAATAACACTGCCCGTTGTTTTATTTTTAGATGGCCATAGTTCACATATATCTCTGCCTTTAACAACTTTTTGCAAGGAAAAAGGGATTGTACTGGTTGCTTTGCTCCCAAATTCAACGCACGTCTTGCAGCCTCTTGATGTCGCCGTTTTTAGGCCCGTTAAGGGGACTTGGCGGGAGATTGTGAGGGAATTCAGGGTTAAACATAATTATGCGAAGCTTAAGCGAACAGACTTTTCTAGAGAAGTGCAAAAATGTTTTGATAGAAGCCTCAAGCCTGAAACAATAATGAGCGGATTCAAATGCTGCGGTCTTTACCCATTTGATGAACAAAATATTGATTATGATAAACTTTTGTCAAAAGCAAAGAAACACCAAGACAAACTATCTGAAGCTAATCAAAATACCCTATTAAATACTCAACAGATTGGCAATATAGATAGCAATGAGCAGTTCAAGAAACAATTTGAAAGTCGATTATCACAAAATACGTTACAATCATTTAAACAGGCAGGCAACCAGTGGACAGGTGACCCCACTTATGAAAAACTATTTTTATTCTGGAAAAGTCTTACATCATCGGAAAGCATATTTGAAGATCAAGCAGATTCTGCTCTAGAGATTGGGGAGACAACCTTTACCAATAATGTCGACGTAGAAAATGTTTATGATTCCGTAAACTTTGATTTTAGATCGGATATTATTCCAACCTCACTAAATTATAAGGAAGCTAACGATATAGGAAATGTCATACCAAACTCATCGCAAGTGTCATTGTCATCAATTAATGTAGTCCCAACAATCGAAGAAAATACATTTAAAGCAAATGTTCTTCTACCGACACCATTGGTTGATTCACCTGTATTAATAGAGATTATTGATCAGAAATTATTAGAAGTTACCCCACCACAGAATTTACGATTATTGACAGAAGAAAAAGCTCAACAAATATTACGTTCATCGACTCCTGAATTAAGCAAGTGTTCTAGTCCCGCTCTATCACTGTCTGAAATAGAAAACGCAGACGATGAAGTTAATAATTGCTCTTCTCCCTTAAGTGTACGTCCAAACAGAATGCAAAAAAAAACGCTGACAGACAAGTATTCGAAAGAAATAGATACCATTCAAAAATCTTTTATAATGCATAGTACAAGCAAAGCTCCAACGCCAATAGTTATTGAAAATGTCACGCCGCCGACCCCATTCAAAGGAATACCTACGCCTTTCAAGAATGCATTTTTTTTCCGAAAACCGAGAATACTCCCCAAACCAAAAAAGTCACTAAAAAGGTAA
- Protein Sequence
- MDRKKRKCYTNAQVAEALSSIRQGMSIYKASRQYNVPETTLRSKRDELYENEHCGKQPVLNLNEEKQIVDWIHYLGKCGFPVTKDQLLHTVSKLVENLQRPNPFKDGVPGKKWFSGFMLRHPAVSKRVAQNLPTSRNQVTEVALRAWFDRVGSYFKENDLLQVLQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNVAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMNMESFYEYVANVFYPWLQQQEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWREIVREFRVKHNYAKLKRTDFSREVQKCFDRSLKPETIMSGFKCCGLYPFDEQNIDYDKLLSKAKKHQDKLSEANQNTLLNTQQIGNIDSNEQFKKQFESRLSQNTLQSFKQAGNQWTGDPTYEKLFLFWKSLTSSESIFEDQADSALEIGETTFTNNVDVENVYDSVNFDFRSDIIPTSLNYKEANDIGNVIPNSSQVSLSSINVVPTIEENTFKANVLLPTPLVDSPVLIEIIDQKLLEVTPPQNLRLLTEEKAQQILRSSTPELSKCSSPALSLSEIENADDEVNNCSSPLSVRPNRMQKKTLTDKYSKEIDTIQKSFIMHSTSKAPTPIVIENVTPPTPFKGIPTPFKNAFFFRKPRILPKPKKSLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01367709;
- 90% Identity
- iTF_00794352; iTF_00794353; iTF_00794343; iTF_00794348; iTF_00794349; iTF_00667320; iTF_00967961; iTF_00640218; iTF_00012897; iTF_00012898; iTF_00012899; iTF_01076356; iTF_01076357; iTF_01152037; iTF_00640230; iTF_01152039; iTF_01152040; iTF_01152043; iTF_00640216; iTF_00640217; iTF_01152031; iTF_01152032;
- 80% Identity
- -