Esim020443.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- clz9_4
- Assembly
- GCA_947532085.1
- Location
- OX383952.1:7571382-7575588[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-10 1.2e-07 32.1 0.1 2 36 47 81 46 82 0.91
Sequence Information
- Coding Sequence
- ATGCAAAGTGGACAGGATGAGAAAGAAATGAGGTTGGAAGAGATGCAGCATGCAAGTGGCATGCTGCGTGCCACGCATGCAGTAACGTTACACAATTATTTAAATATTATGGACAGAAAGAAACGCAAGTGTTATAGTAATGCCCAAGTGGCTGAAGCACTTTCATCGATTCGACAAGGTATGAGTATTTACAAAGCCTCCAGACAGTATAATATACCAGAGACTACATTACGGAGTAAACGAGATGGGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTACTTAACCTAAACGAAGAAAGACAAATCGTTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTTACTAAGAATCAATTATTACACACTGTCTTTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGAAGGAGTTCCTGGAAAGAAATGGTTTTCAGGCTTTATGCTACGACATCCAGCAGTGTCAAAACGTGTGGCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCGTGGTTTGATAGAGTACAATCATATTTTAAAGAAAACGATTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATACAACCGCGTTGCAAATGACGAAAAAGAATGTTTGACCGTTTTAGTCAATGTGTCAGCAGATGGTAATTTAGCTCCGCCAATGGTACTTTTCCCCTACAAGAGGCTACCTAACAATATCAAGTCAACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCAGGCTGGATGACTATGGAGTCGTTCTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACAACAGGAAATAACACTGCCCGTTGTTTTATTTTTAGATGGCCATAGTTCACATATATCTCTGCCTTTGACAACTTTTTGCAAGGAAAAAGGGATTGTACTGGTTGCTTTGCTCCCAAATTCAACGCATGTCTTGCAGCCTCTTGATGTCGCCGTTTTCAGGCCCGTTAAGGGGACTTGGCGGGATATTGTGAGGGAATTCAGGGTTAAACATAATTATGCGAAGCTTAAGCGTACAGACTTTTGTAGAGAAGTAGAAAAATGTTTTCACAGAAGCCTCAAGCCTGAAACAATAATGAGCGGATTCAAATGCTGCGGACTTTACCCGTTTGATGAACAAAATATTGACTATGATAAACTTTTGTCAAAAGTGAAAAAACACCAAGACAAACTATCTGAGGCCAATCAAAATACTCTATTTAATACTCAACAGATGAGCAATATCGATAACAATGAGCAGTTCAAGAAACAATTTGAAAGTCGATTATCACAAAATACATTAAAATTATTTAAAGAGGCAGGCAACCAGTGGACAGGTGACCCCACTTATGAAAAACTATTTTTATTCTGGAAAAGTCTTACATCATCGGAAAGCATATTTGAAGATCAAGCAGACTCTGCTCTAGATATTGGGGAGACAACCTTTACCAATAATGTCGATATAGAAATTGTTTATGATTCCGTAAACTTTGATATTAGATCGGATGGTATTCTAACCCCACTTAATTATGAGGAAGCTAACGATATAGGAAAGGTCACACCAAAGTCATCGCAAGTGTCACTGTCATCAATTAATGTGGTCCCAACAATCGAAGAAAATACATTTGAAGCAAATTCTCTTCTACCAAAACCATTGGTTGATTCACCTGTATTGATAGAGATTATTGATCCGAGGTTATCAGAAGTTACCCCACCACAGAAAATACGATTATTAACAGAAGAAAAAGCCCAACAAATATTACGTTCATCGACTCCTGAATTAAGCAAGTGTTCTAGTGCCGCTCCATCAGTCTCTGAAATAGAGAACGCAGATGATGAAGTTAATAGTAATTGCTCTTCTTCCTTAAGTCTACGTCCAAACAGAATGCAAAAAAAAACACTGATAGACAAGTATTCGGAAGAAATAGATACCCTTCAAAACTCTTTAATAATGCCTAGTACAAGCAAAGCTCCAACGCCAATAGTTATTGAAAATGTCACGCCGCCGACCCCATTCAAAGGAATACCTACACCTTTCAAGAATGCATTTTTTTTTCCGAAAACCGAGAATACTCCCCAAACCAAAAAACTCACTAAAAAGGTTACTCCCACCGTAGCTATTGCAGCAGAATTTATGGAACACCAAAGAAGGTTAGACAAAGAGAAAGAAGAAAAAGAAAAACTTAAACAACTGAGAAAATGTAAGGCATTAGAAAAGAAAAGACAAAAAGAAAACGATAAAAAGATAAAACAAGCACAGACTGAACAGAAAAAAGAAGAACCGAAAAAAATAAGTGTAATGAAGAAATTAAAAGATGTAAATATGCGTCACGTCAAGACACTAGATAAAAATTCAATCCAAAACTCTTCTGACAGTGACGATGATTTTGTTTTTAACATTTCTGCAAAGGCAAAGAAAATTAAACGCCGTAACTTCTTTGATTCAGATGATTCTGTTTAA
- Protein Sequence
- MQSGQDEKEMRLEEMQHASGMLRATHAVTLHNYLNIMDRKKRKCYSNAQVAEALSSIRQGMSIYKASRQYNIPETTLRSKRDGLYENEHCGKQPVLNLNEERQIVDWIHYLGKCGFPVTKNQLLHTVFKLVENLQRPNPFKEGVPGKKWFSGFMLRHPAVSKRVAQNLPTSRNQVTEVALRAWFDRVQSYFKENDLLQVLQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMTMESFYEYVANVFYPWLQQQEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRVKHNYAKLKRTDFCREVEKCFHRSLKPETIMSGFKCCGLYPFDEQNIDYDKLLSKVKKHQDKLSEANQNTLFNTQQMSNIDNNEQFKKQFESRLSQNTLKLFKEAGNQWTGDPTYEKLFLFWKSLTSSESIFEDQADSALDIGETTFTNNVDIEIVYDSVNFDIRSDGILTPLNYEEANDIGKVTPKSSQVSLSSINVVPTIEENTFEANSLLPKPLVDSPVLIEIIDPRLSEVTPPQKIRLLTEEKAQQILRSSTPELSKCSSAAPSVSEIENADDEVNSNCSSSLSLRPNRMQKKTLIDKYSEEIDTLQNSLIMPSTSKAPTPIVIENVTPPTPFKGIPTPFKNAFFFPKTENTPQTKKLTKKVTPTVAIAAEFMEHQRRLDKEKEEKEKLKQLRKCKALEKKRQKENDKKIKQAQTEQKKEEPKKISVMKKLKDVNMRHVKTLDKNSIQNSSDSDDDFVFNISAKAKKIKRRNFFDSDDSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01367709;
- 90% Identity
- iTF_00794344;
- 80% Identity
- iTF_00640216;