Nrev029298.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nycteola revayana
Gene Symbol
clz9
Assembly
GCA_947037095.2
Location
OX344860.2:9392486-9394960[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-10 1.3e-07 32.2 0.1 2 36 11 45 10 46 0.91

Sequence Information

Coding Sequence
atggACAGAAAGAAACGCAAGTGTTATAGTAATGCCCAAGTGGCTGAAGCACTTTCATCAATTCGACAAGGTATGAGTATTTACAAAGCCTCGAGACAGTATAATATACCAGAGACTACATTACGGAGTAAACGAGATGGGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTACTTAACCTAAACGAAGAAAGACAAATCGTTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTTACTAAGAATCAATTATTACACACTGTCTTTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGAAGGAGTTCCTGGAAAGAAATGGTTTTCAGGCTTTATGCTACGACATCCAGCAGTGTCAAAACGTGTGGCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCGTGGTTTGATAGAGTACaatcatattttaaagaaaacgatTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATACAACCGCGTTGCAAATGACGAAAAAGAATGTTTGACCGTTTTAGTCAATGTGTCAGCAGATGGTAATTTAGCTCCGCCAATGGTACTTTTCCCCTACAAGAGGCTACCTAACAATATCAAGTCAACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCAGGCTGGATGACTATGGAGTCGTTTTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACATCAGGAAATAACACTGCccgttgttttatttttagatggCCATAGTTCACATATATCTCTGCCTTTAACAACTTTTTGCAAGGAAAAAGGGATTGTACTGGTTGCTTTGCTCCCAAATTCAACGCATGTCTTGCAGCCTCTTGATGTCGCCGTTTTCAGGCCCGTTAAGGGGACTTGGCGGGATATTGTGAGGGAATTCAGGGTTAAACATAATTATGCGAAGCTTAAGCGTACAGACTTTTGTAGAGAAgtacaaaaatgttttcacAGAAGCCTCAAGCCTGAAACAATAATGAGCGGATTCAAATGCTGCGGACTTTACCCGTTTGATGAACAAAATATTGACTATGATAAACTTTTGTCAAAAGTGAAAAAACACCAAGACAAACTATCTGAGGCCAATCAAAATACTCTATTTAATACTCAACAGATGAGCAATATCGATAACAATGAGCAGTTCAAGAAACAATTTGAAAGTCGATTAtcacaaaatacattaaaatcatttaaagagGCAGGCAACCAGTGGACAGGTGACCCCACTtatgaaaaactatttttattctgGAAAAGTCTTACATCATCGGAAAGCATATTTGAAGATCAAGCAGACTCTGCTCTAGATATTGGGGAGACAACCTTTACCAATAATGTCGATATAGAAATTGTTTATGATTCCGTAAACTTTGATATTAGATCGGATGGTATTCTAACCCCACTTAATTATGAGGAAGCTAACGATATAGGAAAGGTCACACCAAAGTCATCGCAAGTGTCACTGTCATCAATTAATGTGGTCCCAACAatcgaaaaaaatacatttgaagcAAATTCTCTTCTACCAAAACCATTGGTTGATTCACCTGTATTGATAGAGATTATTGATCCGAGGTTATCAGAAGTTACCCCACCACAGAAAATACGATTATTAACAGAAGAAAAAGCCCAACAAATATTACGTTCATCGACTCCTGAATTAAGCAAGTGTTCTAGTGCCGCTCCATCAGTCTCTGAAATAGAGAACGCAGATGATGAAGTTAATAGTAATTGCTCTTCTCCCTTAAGTCTACGTCCAAAcagaatgcaaaaaaaaacactgataGACAAGTATTCGGAAGAAATAGATACCCttcaaaaatctttaataatgCCTAGTACAAGCAAAGCTCCAACGCCAATAGTTATTGAAAATGTCACGCCGCCGACCCCATTCAAAGGAATACCTACACCTTTCaagaatgcatttttttttccgaaAACCGAGAATACTCCCCAAACCAAAAAACTCACTAAAAAGGTTACTCCCACCGTAGCTATTGCAGCAGAATTTATGGAACACCAAAGAAGGTTAGACAAAgagaaagaagaaaaagaaaaacttaaacAACTGAGAAAATGTAAGGCATTAGAAAAGAAAAGACAAAAAGAAAACgataaaaagataaaacaagCACAGACTGAACAGAAAAAAGAAGAaccgaaaaaaataagtgtAATGAAGAAATTAAAAGATGTAAATATGCGTCACGTCAACACACTAGATAAAAATTCAATCCAAAACTCTTCTGACAGTGAcgatgattttgtttttaacattCCTGCAAAGGCAAAGAAAATTAAACGCCGTAACTTCTATGATTCAGATGattctgtttaa
Protein Sequence
MDRKKRKCYSNAQVAEALSSIRQGMSIYKASRQYNIPETTLRSKRDGLYENEHCGKQPVLNLNEERQIVDWIHYLGKCGFPVTKNQLLHTVFKLVENLQRPNPFKEGVPGKKWFSGFMLRHPAVSKRVAQNLPTSRNQVTEVALRAWFDRVQSYFKENDLLQVLQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMTMESFYEYVANVFYPWLQHQEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRVKHNYAKLKRTDFCREVQKCFHRSLKPETIMSGFKCCGLYPFDEQNIDYDKLLSKVKKHQDKLSEANQNTLFNTQQMSNIDNNEQFKKQFESRLSQNTLKSFKEAGNQWTGDPTYEKLFLFWKSLTSSESIFEDQADSALDIGETTFTNNVDIEIVYDSVNFDIRSDGILTPLNYEEANDIGKVTPKSSQVSLSSINVVPTIEKNTFEANSLLPKPLVDSPVLIEIIDPRLSEVTPPQKIRLLTEEKAQQILRSSTPELSKCSSAAPSVSEIENADDEVNSNCSSPLSLRPNRMQKKTLIDKYSEEIDTLQKSLIMPSTSKAPTPIVIENVTPPTPFKGIPTPFKNAFFFPKTENTPQTKKLTKKVTPTVAIAAEFMEHQRRLDKEKEEKEKLKQLRKCKALEKKRQKENDKKIKQAQTEQKKEEPKKISVMKKLKDVNMRHVNTLDKNSIQNSSDSDDDFVFNIPAKAKKIKRRNFYDSDDSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01367709;
90% Identity
iTF_00794344;
80% Identity
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