Esim020251.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- clz9
- Assembly
- GCA_947532085.1
- Location
- OX383952.1:5566591-5576395[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-10 1.2e-07 32.1 0.1 2 36 64 98 63 99 0.91
Sequence Information
- Coding Sequence
- ATGTCGGCAAATCAACAAGATTATGAAGATGTTGACGAGGATGAGGCGGATGAAGACCTGCTGAAGGATATGGAGGATATCAGCGAAGAATTGGTACCCCGACAACCTGAAAGCGAGTGGGAAGAGTCTGATGAAGAGCCCCTTTCATTTCGAGATATTATGGACAGAAAGAAACGCAAGTGTTATAGTAATGCCCAAGTGGCTGAAGCACTTTCATCGATTCGACAAGGTATGAGTATTTACAAAGCCTCCAGACAGTATAATATACCAGAGACTACATTACGGAGTAAACGAGATGGGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTACTTAACCTAAACGAAGAAAGACAAATCGTTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTTACTAAGAATCAATTATTACACACTGTCTTTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGAAGGAGTTCCTGGAAAGAAATGGTTTTCAGGCTTTATGCTACGACATCCAGCAGTGTCAAAACGTGTGGCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCGTGGTTTGATAGAGTACAATCATATTTTAAAGAAAACGATTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATACAACCGCGTTGCAAATGACGAAAAAGAATGTTTGACCGTTTTAGTCAATGTGTCAGCAGATGGTAATTTAGCTCCGCCAATGGTACTTTTCCCCTACAAGAGGCTACCTAACAATATCAAGTCAACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCAGGCTGGATGACTATGGAGTCGTTCTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACAACAGGAAATAACACTGCCCGTTGTTTTATTTTTAGATGGCCATAGTTCACATATATCTCTGCCTTTGACAACTTTTTGCAAGGAAAAAGGGATTGTACTGGTTGCTTTGCTCCCAAATTCAACGCATGTCTTGCAGCCTCTTGATGTCGCCGTTTTCAGGCCCGTTAAGGGGACTTGGCGGGATATTGTGAGGGAATTCAGGGTTAAACATAATTATGCGAAGCTTAAGCGTACAGACTTTTGTAGAGAAGTAGAAAAATGTTTTCACAGAAGCCTCAAGCCTGAAACAATAATGAGCGGATTCAAATGCTGCGGACTTTACCCGTTTGATGAACAAAATATTGACTATGATAAACTTTTGTCAAAAGTGAAAAAACACCAAGACAAACTATCTGAGGCCAATCAAAATACTCTATTTAATACTCAACAGATGAGCAATATCGATAACAATGAGCAGTTCAAGAAACAATTTGAAAGTCGATTATCACAAAATACATTAAAATTATTTAAAGAGGCAGGCAACCAGTGGACAGGTGACCCCACTTATGAAAAACTATTTTTATTCTGGAAAAGTCTTACATCATCGGAAAGCATATTTGAAGATCAAGCAGACTCTGCTCTAGATATTGGGGAGACAACCTTTACCAATAATGTCGATATAGAAATTGTTTATGATTCCGTAAACTTTGATATTAGATCGGATGGTATTCTAACCCCACTTAATTATGAGGAAGCTAACGATATAGGAAAGGTCACACCAAAGTCATCGCAAGTGTCACTGTCATCAATTAATGTGGTCCCAACAATCGAAGAAAATACATTTGAAGCAAATTCTCTTCTACCAAAACCATTGGTTGATTCACCTGTATTGATAGAGATTATTGATCCGAGGTTATCAGAAGTTACCCCACCACAGAAAATACGATTATTAACAGAAGAAAAAGCCCAACAAATATTACGTTCATCGACTCCTGAATTAAGCAAGTGTTCTAGTGCCGCTCCATCAGTCTCTGAAATAGAGAACGCAGATGATGAAGTTAATAGTAATTGCTCTTCTTCCTTAAGTCTACGTCCAAACAGAATGCAAAAAAAAACACTGATAGACAAGTATTCGGAAGAAATAGATACCCTTCAAAACTCTTTAATAATGCCTAGTACAAGCAAAGCTCCAACGCCAATAGTTATTGAAAATGTCACGCCGCCGACCCCATTCAAAGGAATACCTACACCTTTCAAGAATGCATTTTTTTTTCCGAAAACCGAGAATACTCCCCAAACCAAAAAACTCACTAAAAAGGTTACTCCCACCGTAGCTATTGCAGCAGAATTTATGGAACACCAAAGAAGGTTAGACAAAGAGAAAGAAGAAAAAGAAAAACTTAAACAACTGAGAAAATGTAAGGCATTAGAAAAGAAAAGACAAAAAGAAAACGATAAAAAGATAAAACAAGCACAGACTGAACAGAAAAAAGAAGAACCGAAAAAAATAAGTGTAATGAAGAAATTAAAAGATGTAAATATGCGTCACGTCAAGACACTAGATAAAAATTCAATCCAAAACTCTTCTGACAGTGACGATGATTTTGTTTTTAACATTTCTGCAAAGGCAAAGAAAATTAAACGCCGTAACTTCTTTGATTCAGATGATTCTGTTTAA
- Protein Sequence
- MSANQQDYEDVDEDEADEDLLKDMEDISEELVPRQPESEWEESDEEPLSFRDIMDRKKRKCYSNAQVAEALSSIRQGMSIYKASRQYNIPETTLRSKRDGLYENEHCGKQPVLNLNEERQIVDWIHYLGKCGFPVTKNQLLHTVFKLVENLQRPNPFKEGVPGKKWFSGFMLRHPAVSKRVAQNLPTSRNQVTEVALRAWFDRVQSYFKENDLLQVLQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMTMESFYEYVANVFYPWLQQQEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRVKHNYAKLKRTDFCREVEKCFHRSLKPETIMSGFKCCGLYPFDEQNIDYDKLLSKVKKHQDKLSEANQNTLFNTQQMSNIDNNEQFKKQFESRLSQNTLKLFKEAGNQWTGDPTYEKLFLFWKSLTSSESIFEDQADSALDIGETTFTNNVDIEIVYDSVNFDIRSDGILTPLNYEEANDIGKVTPKSSQVSLSSINVVPTIEENTFEANSLLPKPLVDSPVLIEIIDPRLSEVTPPQKIRLLTEEKAQQILRSSTPELSKCSSAAPSVSEIENADDEVNSNCSSSLSLRPNRMQKKTLIDKYSEEIDTLQNSLIMPSTSKAPTPIVIENVTPPTPFKGIPTPFKNAFFFPKTENTPQTKKLTKKVTPTVAIAAEFMEHQRRLDKEKEEKEKLKQLRKCKALEKKRQKENDKKIKQAQTEQKKEEPKKISVMKKLKDVNMRHVKTLDKNSIQNSSDSDDDFVFNISAKAKKIKRRNFFDSDDSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01367709;
- 90% Identity
- iTF_00794344;
- 80% Identity
- iTF_00640216;