Basic Information

Insect: Parascotia fuliginaria
Gene Symbol: clz9
Assembly: GCA_963082885.1
Location: OY720192.1:3773557-3776031[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-10 1.3e-07 32.2 0.1 2 36 11 45 10 46 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-10	1.3e-07	32.2	0.1	2	36	11	45	10	46	0.91

Sequence Information

Coding Sequence: atgGACAGAAAGAAACGCAAGTGTTATAGTAATGCCCAAGTGGCTGAAGCACTTTCATCGATTCGACAAGGTATGAGTATTTACAAAGCCTCCAGACAGTATAATATACCAGAGACTACATTACGGAGTAAACGAGATGGGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTACTTAACCTAAACGAAgaaagacaaatcgttgattGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTTACTAAGAATCAATTATTACACACTGTCTTTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGAAGGAGTTCCTGGAAAGAAATGGTTTTCAGGCTTTATGCTACGACATCCAGCAGTGTCAAAACGTGTGGCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCGTGGTTTGATAGAGTACaatcatattttaaagaaaacgaTTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATACAACCGCGTTGCAAATGACGAAAAAGAATGTTTGACCGTTTTAGTCAATGTGTCAGCAGATGGTAATTTAGCTCCGCCAATGGTACTTTTCCCCTACAAGAGGCTACCTAACAATATCAAGTCAACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCAGGCTGGATGACTATGGAGTCGTTCTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACAACAGGAAATAACACTGcccgttgttttatttttagatggcCATAGTTCACATATATCTCTGCCTTTGACAACTTTTTGCAAGGAAAAAGGGATTGTACTGGTTGCTTTGCTCCCAAATTCAACGCATGTCTTGCAGCCTCTTGATGTCGCCGTTTTCAGGCCCGTTAAGGGGACTTGGCGGGATATTGTGAGGGAATTCAgggttaaacataattatgcgaAGCTTAAGCGTACAGacttttgtagagaagtagaaaAATGTTTTCACAGAAGCCTCAAGCCTGAAACAATAATGAGCGGATTCAAATGCTGCGGACTTTACCCGTTTGATGAACAAAATATTGACTATGATAAACTTTTGTCAAAAGTGAAAAAACACCAAGACAAACTATCTGAGGCCAATCAAAATACTCTATTTAATACTCAACAGATGAGCAATATCGATAACAATGAGCAGTTCAAGAAACAATTTGAAAGTCGATTATcacaaaatacattaaaattatttaaagaggCAGGCAACCAGTGGACAGGTGACCCCACTTatgaaaaactatttttattctgGAAAAGTCTTACATCATCGGAAAGCATATTTGAAGATCAAGCAGACTCTGCTCTAGATATTGGGGAGACAACCTTTACCAATAATGTCGATATAGAAATTGTTTATGATTCCGTAAACTTTGATATTAGATCGGATGGTATTCTAACCCCACTTAATTATGAGGAAGCTAACGATATAGGAAAGGTCACACCAAAGTCATCGCAAGTGTCACTGTCATCAATTAATGTGGTCCCAACAATCGAAGAAAATACATTTGAAGCAAATTCTCTTCTACCAAAACCATTGGTTGATTCACCTGTATTGATAGAGATTATTGATCCGAGGTTATCAGAAGTTACCCCACCACAGAAAATACGATTATTAACAGAAGAAAAAGCCCAACAAATATTACGTTCATCGACTCCTGAATTAAGCAAGTGTTCTAGTGCCGCTCCATCAGTCTCTGAAATAGAGAACGCAGATGATGAAGTTAATAGTAATTGCTCTTCTTCCTTAAGTCTACGTCCAAACagaatgcaaaaaaaaacactgataGACAAGTATTCGGAAGAAATAGATACCCTTCAAAACTCTTTAATAATGCCTAGTACAAGCAAAGCTCCAACGCCAATAGTTATTGAAAATGTCACGCCGCCGACCCCATTCAAAGGAATACCTACACCTTTCAagaatgcatttttttttccgAAAACCGAGAATACTCCCCAAACCAAAAAACTCACTAAAAAGGTTACTCCCACCGTAGCTATTGCAGCAGAATTTATGGAACACCAAAGAAGGTTAGACaaagagaaagaagaaaaagaaaaacttaaacaACTGAGAAAATGTAAGGCATTagaaaagaaaagacaaaaagaaaacgataaaaagataaaacaagcACAGACTGAACAGAAAAAAGAAGAACCGAAAAAAATAAGTGTaatgaagaaattaaaagaTGTAAATATGCGTCACGTCAAGACACTAGATAAAAATTCAATCCAAAACTCTTCTGACAGTGAcgatgattttgtttttaacatttctGCAAAGGCAAAGAAAATTAAACGCCGTAACTTCTTTGATTCAGATGattctgtttaa
Protein Sequence: MDRKKRKCYSNAQVAEALSSIRQGMSIYKASRQYNIPETTLRSKRDGLYENEHCGKQPVLNLNEERQIVDWIHYLGKCGFPVTKNQLLHTVFKLVENLQRPNPFKEGVPGKKWFSGFMLRHPAVSKRVAQNLPTSRNQVTEVALRAWFDRVQSYFKENDLLQVLQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMTMESFYEYVANVFYPWLQQQEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRVKHNYAKLKRTDFCREVEKCFHRSLKPETIMSGFKCCGLYPFDEQNIDYDKLLSKVKKHQDKLSEANQNTLFNTQQMSNIDNNEQFKKQFESRLSQNTLKLFKEAGNQWTGDPTYEKLFLFWKSLTSSESIFEDQADSALDIGETTFTNNVDIEIVYDSVNFDIRSDGILTPLNYEEANDIGKVTPKSSQVSLSSINVVPTIEENTFEANSLLPKPLVDSPVLIEIIDPRLSEVTPPQKIRLLTEEKAQQILRSSTPELSKCSSAAPSVSEIENADDEVNSNCSSSLSLRPNRMQKKTLIDKYSEEIDTLQNSLIMPSTSKAPTPIVIENVTPPTPFKGIPTPFKNAFFFPKTENTPQTKKLTKKVTPTVAIAAEFMEHQRRLDKEKEEKEKLKQLRKCKALEKKRQKENDKKIKQAQTEQKKEEPKKISVMKKLKDVNMRHVKTLDKNSIQNSSDSDDDFVFNISAKAKKIKRRNFFDSDDSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01367709;
90% Identity: iTF_00794344;
80% Identity: iTF_00640216;