Stae007228.1
Basic Information
- Insect
- Sphaerophoria taeniata
- Gene Symbol
- stc
- Assembly
- GCA_943591125.1
- Location
- CALSBT010000037.1:972438-975610[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.8 4e+04 -4.0 1.6 15 19 322 326 321 326 0.81 2 14 0.15 2.2e+03 0.0 0.3 4 10 355 361 354 363 0.93 3 14 4.5e-05 0.63 11.3 18.1 4 19 369 384 367 384 0.93 4 14 5.2e-06 0.073 14.3 12.8 3 18 422 437 420 438 0.91 5 14 2 2.8e+04 -3.5 3.1 8 13 443 448 439 451 0.68 6 14 1.3e-06 0.018 16.3 19.4 1 19 478 496 478 496 0.98 7 14 8.4e-05 1.2 10.4 16.3 4 18 544 558 537 559 0.86 8 14 0.067 9.4e+02 1.2 12.3 1 11 599 609 599 621 0.91 9 14 4.3e-09 6.1e-05 24.1 14.9 1 18 626 643 626 644 0.97 10 14 2.1 3e+04 -3.6 1.1 6 10 673 677 671 679 0.67 11 14 3 4.2e+04 -8.6 11.0 10 18 691 700 680 701 0.75 12 14 9.5e-09 0.00013 23.0 11.7 1 16 737 752 737 759 0.92 13 14 4.4e-07 0.0062 17.7 13.9 1 18 769 787 769 788 0.89 14 14 0.62 8.7e+03 -1.9 0.5 7 12 803 808 797 808 0.71
Sequence Information
- Coding Sequence
- ATGTCTGATGCATTCCAGTATCATTACCAAGACGCAGGAGTACCTGGCGCTGGACCCGGAACAAGTGGAAACAACAACTACATCGACTTCAATCAATTTATGATGCAGCACAACCTGATTCAAGGCGCTGCAGCAGCAGCCTCAACATCTTCGCCCACAATCAATTTCAATGGAGATTTCGATCGCCCATCGACGTCGACGACGAATCCATTCCACTATAACGGCTACAGTGGCTACCAACAGCAGCAAGAAAATGATGACATCTATTACATGAATGGCGGAGCCACAGCTGGCTCTGGACGCTTGTCCAATGCCACATTCAACAACTATACAACCCAATCAGCTTACTCGTCATCAAATCTCCATGCCAATGCAGCAGAGTTTGTTCCGAGGTTCTCAAATCTCTCCCTCGTCGACGAGAATACTGCCAACGATAACGGCTCCCTGGACAACCAGAATGCTAACGACGACTCGCCAAAGTCCCCTCCGCAGCGCTACATCAGCACGTCAAGCAAAAACCGTGATTCGACATCTCGAGGAGGTTCGGGAGGTGCAGGTAGCTCTTCTTCGCGCCGCCAGAACGGCAGCCGCGACTACCAGCGAAATCAGCGTTATGACAATCATCGCAGCAACAAGCGGCGCGACGACTGGAATCGCAACCGCGACCGCTTGAATGCATTCCGTGACGAAAAGTCGAGTCTAGAAAATGGAAAAGACAGTCCACAGACGTCGCCCGAGAAGAAACCTTCGCCCAAGAAGCCACCACAGCAGGAAAACGAGAAGCTCTCCCAACGCGAGAAACTAGTGCGCGAAATTGAAAATCGTCGTCTTGAGTGTCTCGTCTGCGTCGAGTCCATCAAGAGTCACAATTCGGTCTGGTCTTGTCACAACTGCTACCACATCTTCCATCTGAGTTGTATCATCAAATGGGCTTCGAGTTCCAAGTCCGAGGGCGGCTGGCGCTGTCCAGCTTGCCAGAATGTTGAGAAAGAGGTTCCTCGCGACTATTACTGCTTCTGTGGGGAGGTCAAGAACCCGCCGCTTAATCGTCACGATATTGCGCATTCGTGCGGCGAGACTTGTGGACGAATTGAAGGCTGTCCACATCCGTGTACGTTGCTTTGTCATCCTGGACCATGCCCGCCGTGCCAGGCTAGCGTGAAGCGAGAATGTGGCTGTGGCAAGACCTCAAAGCTAATGCAATGCTGCTTGAAGAGTAAAATCGATTGCGACGCCGATTGCCAGAAAATCCTGAACTGCGAGTTGCATGCCTGCACCGAGAAGTGTCATGAAGGGAAGTGCAAGCCATGCGAGCACAAGGTTGACCAGAAGTGCCATTGCGGCAAACACGACCGGCAAGTGGCCTGCACACGGGATTCACACGAGAAAAAGACGTATTCCTGTGGCAAGCCCTGCGGAAAGGAACTCAGCTGCGGAAATCACAAGTGCAAGGACTGCTGTCACCCCGGCGTGTGTCGTCCATGCAAAACCAGCCCCGAACAGACGACCTCGTGCCCCTGCGGCAAGATGCCCATCGTCCTGGGTCAGCGAAAATCCTGCCTCGATCCGATTCCACTGTGCAACGGCACCTGCAGCAAGACGTTACGCTGTGGCAAGGCTGCTCATCCACATCACTGCACAAGCAAGTGCCACTTGGGCAATTGTCCGCCCTGCAACAAGCAGACCGCCGTCAAATGCCGCTGCGGTCACATGGACCAAATGATAAAATGCCGTCAGCTATCGACTCGTGCCGACGATGCCCGCTGCAAGAAGCGCTGCGTCAAGAAACGCTCCTGTGGCAAGCACAAATGCAATCAGGAGTGCTGCATCGACATCGACCACATCTGCCCGATGCCCTGCAACTACACCCTCTCCTGTGGCAAGCATAAATGCGACCAGCAATGCCATCGTGGCAATTGTCCCCCATGCTATCGTTCGTCGTTCGAGGAGTTGTATTGTGAGTGTGGCGCTGAAGTCATCTATCCTCCGGTCCCGTGTGGCACCAAGAAGCCGCCGTGTACTCGCCCTTGCTCGCGCCAGCATCCTTGCGACCATCCAGTCCAACACAACTGCCATTCAGCGGCTACCTGTCCGCCGTGCATGATGTTCACCACGAAATGGTGTTTCGGACAGCACGAACAGCGCAAGACGATTCCATGCGTTCAGGAGAGCTTCAGCTGTGGCCTGCCGTGCAACAAGCCGCTGTCCTGTGGCCGTCACAAGTGCATCAAGCCGTGTCACGAGGGACCTTGTCAGGCAGCCGGCGAGATTTGTAAACAGAATTGCACAACGGCGCGCGCCGGGTGTGGCCACAAGTGTCAGGCACCGTGTCACGATGGAGAATGCCCAGAATCAGCTTGCAAGGAGATGGTGGAGATAACTTGCGAATGTGGCAACCGGAAGCAGTCCAGAACCTGCCACGACTTCTCGAGAGAGTACAGACGCATCGCCACTGCCCAGCTGGCTTCATCCATGGCCGAGGTACAGCGTGGCAACACCATTGAACTCAGTGACATCCTCGGACCTGTTAAAATCAACAGCAACAAAGCACTCGAATGCAACGAAGAGTGCCGAACATTGGAACGTAATCGCCGCCTTGCAATCGGCCTGCAAATCCGCAATCCCGATCTGCCACAGAAGCTACTCACCAAATATTCTGATTTCATACGCGGCTATGCCAAAAAGGATCCAGCTTTGGTCAAGAGCATCCACGACGCCCTCACAAATCTCGTCAAACTGGCCAAGGAGAGCAAACAGAAATCACGCAGTCATTCGTTTCCATCAATGAAACGGGAAAAGCGTCAGCTGGTCCATGAGATGTGCGAGATGTTTGGCGTAGAGTCGGTCGCTTACGATGCCGAACCGAATAGGAATGTCGTGGCTACTGCTTTTAAGGATAAGTCCTGGTTACCAGCTCAAAGCATCATGGAAGTCATTCAGCGCGAAAGTGGACAGAGACGTGTTCCGGTGCCAAGCAACAATGCCTGGGGCATTAAGCGTTAA
- Protein Sequence
- MSDAFQYHYQDAGVPGAGPGTSGNNNYIDFNQFMMQHNLIQGAAAAASTSSPTINFNGDFDRPSTSTTNPFHYNGYSGYQQQQENDDIYYMNGGATAGSGRLSNATFNNYTTQSAYSSSNLHANAAEFVPRFSNLSLVDENTANDNGSLDNQNANDDSPKSPPQRYISTSSKNRDSTSRGGSGGAGSSSSRRQNGSRDYQRNQRYDNHRSNKRRDDWNRNRDRLNAFRDEKSSLENGKDSPQTSPEKKPSPKKPPQQENEKLSQREKLVREIENRRLECLVCVESIKSHNSVWSCHNCYHIFHLSCIIKWASSSKSEGGWRCPACQNVEKEVPRDYYCFCGEVKNPPLNRHDIAHSCGETCGRIEGCPHPCTLLCHPGPCPPCQASVKRECGCGKTSKLMQCCLKSKIDCDADCQKILNCELHACTEKCHEGKCKPCEHKVDQKCHCGKHDRQVACTRDSHEKKTYSCGKPCGKELSCGNHKCKDCCHPGVCRPCKTSPEQTTSCPCGKMPIVLGQRKSCLDPIPLCNGTCSKTLRCGKAAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQQCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPPCTRPCSRQHPCDHPVQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCVQESFSCGLPCNKPLSCGRHKCIKPCHEGPCQAAGEICKQNCTTARAGCGHKCQAPCHDGECPESACKEMVEITCECGNRKQSRTCHDFSREYRRIATAQLASSMAEVQRGNTIELSDILGPVKINSNKALECNEECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGYAKKDPALVKSIHDALTNLVKLAKESKQKSRSHSFPSMKREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAFKDKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00894449; iTF_01212454; iTF_00666187; iTF_01318705; iTF_00694277; iTF_00984706; iTF_00695144; iTF_00426799; iTF_00335539; iTF_00427775; iTF_00665308; iTF_01397004;
- 90% Identity
- -
- 80% Identity
- -