Spyr014853.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- stc
- Assembly
- GCA_905146935.1
- Location
- LR989927.1:58204812-58208814[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 3e+04 -4.0 1.6 15 19 318 322 317 322 0.81 2 14 0.054 8.7e+02 0.9 0.2 4 10 351 357 350 358 0.95 3 14 5.1e-06 0.083 13.8 16.4 4 19 365 380 363 380 0.93 4 14 0.9 1.5e+04 -3.0 1.4 6 10 406 410 405 410 0.90 5 14 8.8e-07 0.014 16.2 12.7 3 18 418 433 416 434 0.91 6 14 1.2 2e+04 -3.4 2.5 7 13 438 444 435 445 0.77 7 14 1.7e-07 0.0028 18.5 19.4 1 19 474 492 474 492 0.98 8 14 0.00022 3.5 8.6 16.4 4 18 540 554 533 555 0.86 9 14 0.044 7.2e+02 1.2 12.3 1 11 595 605 595 617 0.91 10 14 4.4e-10 7.1e-06 26.7 15.5 1 18 622 639 622 640 0.97 11 14 2 3.2e+04 -8.6 11.0 10 18 687 696 676 697 0.75 12 14 6.2e-07 0.01 16.7 13.3 1 16 733 748 733 758 0.92 13 14 5.4e-07 0.0088 16.9 12.6 1 18 765 783 765 784 0.89 14 14 0.41 6.6e+03 -1.9 0.5 7 12 799 804 793 804 0.71
Sequence Information
- Coding Sequence
- ATGTCTGATGCATTCCATCATCGTTACCACGACGCTAGAGGACCTGGAGGCGGAAACAACAACTACATTGATTTCAATCAGTTCATGATGCAGCACAACATCATCCAAGGAGGAGCAGGTGGCTCCTCTTCAAATGTCAATGGGGATATGGATCGAAGTGCGTCGTCGAATCCATTCCATTACAATGGCGGAGGCTACCGTGGCTATCACTCGCAGCAAGTCGATGATAACAGCTTCTATATGAACGGTGGTGGGTCGGGCAGATTGCCTGCCTCCACTTTTAACAACTTTACCCAACAACGCCAATCGAACTACTCCAATTCAAATTTACATGCCAACGCAGCCGAATTCGTTCCGAGATTTTCAAATCTTTCTCTCGGCGAATCGACAGCAACACACAACTCCAATGACGTGGCTGACCATCAGAACGCCAACGGCCCGTCGACCAGTGAGGGGCATGGAGACTCGCCAAAATCGCCACCGCAGCGTTACACTGGAGCGACAAGTAGAAATCGCGAATCGACTTCTCGTGGGGGTTCCGGGGGAGCTGGTAACTCTTCCCGACGGCAGAATGGTCGAGACTATCAGAGGAACCAGCGCTATGACAATCATCGTAGCAACAAACGTCGTGACGACTGGAATAGGAATCGGGATAGATTGAATGCCTTCAGAGATGAGAAATCCTCACTGGAGAACGGCAAGGACAGTCCGCAAGCCTCGCCCGAGAAGAAACCTTCGCCTAAGAAGCCGTCATACCCCGAAAATGAAAAACTTTCTCAGCGCGAGAAATTGATGCGAGAGATAGAGGGTCGCCGTCTGGAATGTTTGGTGTGCGTGGAGCACATCAAGAGTCACAACTCAGTGTGGTCATGTCACAATTGCTATCACATTTTCCATTTGAATTGCATCATCAAATGGGCTTCTAGTTCGAAGTCAGACGATGGCTGGCGTTGTCCAGCTTGCCAGAATGTCGAAAAAGACGTCCCGCGGGACTACTATTGCTTCTGTGGCAAAGTCAAGAGTCCACAGTTGAATCGCAACGATATTGCTCACTCTTGTGGCGAAGTTTGTGGTCGCATCGAAGGCTGTCCGCATGCCTGTACCTTGCTATGTCATCCTGGACCATGTCCACCGTGTCAGGCAAATGTTACCCGAGAATGTGGCTGTGGCAAGACTTCGAAGACAATGCAGTGCTATTTGAAGGAGTCGATTGAATGCGAAGAAATTTGCCAGAAATTACTCAATTGTGAGTTGCACGCGTGCGAGCAGAAATGCCACGAGGGCAAGTGTAAGCCGTGCGATCATAAAGTTGATCAGAAGTGCCACTGTGGAAAAAATGACAGACAGGTGGCTTGTACCCGAGACTCTCACGAGAAAAAGAACTACTCCTGTGGCAAACCATGTGGACGGGATCTCACTTGTGGCAATCACAAGTGCAAGGACTGTTGTCACACTGGCGAATGTCGTCCGTGTAAGATGAGCCCCGAGATGACAACTTCATGTCCTTGTGGAAAGATGCCAATTGTCTTAGAGCAAAGAAAATCCTGCTTAGATCCGATACCGGTTTGCGATGGCATCTGCAACAAGACTCTGCGCTGTGGTAAAGCAGTGCATCCCCATCATTGCACAACCAAGTGCCATTTGGGCAACTGTCCACCGTGCAACAAGCAAACAGCAGTTAAATGTCGCTGCGGCCACATGGACCAAATGATAAAATGCCGTCACTTATCGACTCGTGCCGATGATGCACGCTGCAAGAAGCGTTGTGTTAAGAAGCGATCCTGTGGCAAGCACAAGTGCAACCAAGAGTGCTGCATTGATATCGATCACATCTGCCCCATGCCCTGTAACTATACTCTCTCGTGTGGCAAACACAAGTGCGACCAGCCCTGCCATCGGGGTAATTGTCCTCCATGCTATCGCAGCTCGTTCGAAGAGTTATATTGCGAATGCGGTGCGGAGGTAATCTATCCGCCAGTTCCTTGTGGAACCAAGAAGCCGGCTTGTAAGCGCCATTGCTCGCGTCAGCATCCTTGCGACCATCCAGTTCAACATAACTGCCATTCGGCGGCCACTTGCCCGCCGTGTATGATGTTCACCACAAAGTGGTGTTATGGACAGCACGAACAGCGGAAAACCATTCCATGCGTTCAGGAGAGTTTCAGTTGCGGTATGGCTTGCAACAAACCACTACCTTGTGGACGCCACAAGTGCATAAAGCCGTGTCATGAAGGAGTCTGCCAAGCGGCCGGGGAAATTTGTAAGCAGAGTTGCACCACTCTTCGTGCAGGTTGTGGCCATAAGTGTATGGCGCCATGCCATGAAGGAAACTGCCCAGAGACTGCTTGTAAAGAGATGGTGGAAATAACATGTGAGTGTGGCAACCGAAAACAGTCGAGGACTTGCCACGACTTCTCCAGGGAATACCGACGTATAGCCACGGCTCAGTTGGCTTCATCTATGGCTGAGGTACAGCGGGGCAACACCATCGAGCTGAGTGACATTCTGGGACCCGTCAAGATCAACAGTAACAAAGCACTTGAATGCAACGAAGAATGCCGAACATTGGAACGCAATCGACGTCTTGCAATTGGTTTGCAAATCCGTAATCCCGATCTGCCACAGAAGCTAACAACCAAATATTCCGAATTCATTCGTGGCTATGCCAAAAAAGACCCAGCACTCGTAAAGAGCATCCATGATTCGCTAACGACTCTTGTCAAATTGGCCAAGGAGAGCAAACAGAAGTCTCGTAGCCATTCATTTCCCACTATGAAACGCGAAAAACGCCAGCTGGTACATGAGATGTGCGAGATGTTTGGTGTTGAGTCGGTAGCCTACGATGCCGAGCCAAACAGGAATGTAGTTGCTACTGCTTATAAGGATAAGTCCTGGTTACCAGCACAGAGTATCATGGAAGTTATTCGACGTGAAAGTGGACAGAGACGTGTTCCAGTGCCGAGTAACAATGCCTGGGGCATAAAGCGATAA
- Protein Sequence
- MSDAFHHRYHDARGPGGGNNNYIDFNQFMMQHNIIQGGAGGSSSNVNGDMDRSASSNPFHYNGGGYRGYHSQQVDDNSFYMNGGGSGRLPASTFNNFTQQRQSNYSNSNLHANAAEFVPRFSNLSLGESTATHNSNDVADHQNANGPSTSEGHGDSPKSPPQRYTGATSRNRESTSRGGSGGAGNSSRRQNGRDYQRNQRYDNHRSNKRRDDWNRNRDRLNAFRDEKSSLENGKDSPQASPEKKPSPKKPSYPENEKLSQREKLMREIEGRRLECLVCVEHIKSHNSVWSCHNCYHIFHLNCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKVKSPQLNRNDIAHSCGEVCGRIEGCPHACTLLCHPGPCPPCQANVTRECGCGKTSKTMQCYLKESIECEEICQKLLNCELHACEQKCHEGKCKPCDHKVDQKCHCGKNDRQVACTRDSHEKKNYSCGKPCGRDLTCGNHKCKDCCHTGECRPCKMSPEMTTSCPCGKMPIVLEQRKSCLDPIPVCDGICNKTLRCGKAVHPHHCTTKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRHLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPACKRHCSRQHPCDHPVQHNCHSAATCPPCMMFTTKWCYGQHEQRKTIPCVQESFSCGMACNKPLPCGRHKCIKPCHEGVCQAAGEICKQSCTTLRAGCGHKCMAPCHEGNCPETACKEMVEITCECGNRKQSRTCHDFSREYRRIATAQLASSMAEVQRGNTIELSDILGPVKINSNKALECNEECRTLERNRRLAIGLQIRNPDLPQKLTTKYSEFIRGYAKKDPALVKSIHDSLTTLVKLAKESKQKSRSHSFPTMKREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDKSWLPAQSIMEVIRRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357609;
- 90% Identity
- iTF_00894449;
- 80% Identity
- -