Llat010546.1
Basic Information
- Insect
- Leucozona laternaria
- Gene Symbol
- stc
- Assembly
- GCA_932273905.1
- Location
- CAKNZR010000227.1:391588-398907[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.9 4.3e+04 -4.0 1.6 15 19 321 325 320 325 0.81 2 12 0.065 1.5e+03 0.6 0.4 4 10 354 360 353 360 0.95 3 12 5.4e-07 0.013 16.9 15.1 1 19 366 383 366 383 0.93 4 12 8.3e-07 0.019 16.3 13.4 3 18 421 436 419 437 0.91 5 12 1.3 3.1e+04 -3.5 3.1 8 13 442 447 438 450 0.68 6 12 1.2e-07 0.0027 19.0 18.6 1 19 477 495 477 495 0.98 7 12 0.00022 5.2 8.5 16.5 4 18 543 557 536 558 0.86 8 12 0.044 1e+03 1.2 12.3 1 11 598 608 598 620 0.91 9 12 4.4e-10 1e-05 26.7 15.5 1 18 625 642 625 643 0.97 10 12 2 4.6e+04 -8.8 12.8 10 18 690 699 676 700 0.69 11 12 3.8e-08 0.00089 20.6 14.3 1 16 736 751 736 761 0.92 12 12 4.4e-07 0.01 17.2 12.7 1 18 768 786 768 787 0.89
Sequence Information
- Coding Sequence
- ATGTCTGATGCATTCCATCATCGTTACCACGACGCAGGAGGACCTGAAAGCGGGAATAACAACTATATTAATTTCAATCAATTCATGATGCAGCACAATATTATCCAAGGAGGAGGAGGAGCTGGTTCCTCTTCTGTGAATGTGAATGGAGATATAGACCAAGGATCGTCGTCGAATCCCTTCCATTACAATGGAGGAGGCTATGGTGGGTATCAACCGCACCAAGTGAACGATGCCTATTATACGAACGGAGGAGGAGGAACAGGTGGTTCTGGTAGATTGTCCAACTACAACAACTTCACCCAACAACGCCAATCTAACTACTCCAATTCAAATCTTCATGCCAACGCAGCCGAATTCGTTCCCAGGTTTTCGAATCTTTCTCTCGGCGAATCAGGAGCTGGTTACAACTCCAATGACGTGGCTGACCTTCAGAACGCCAATGGTCCATCGACTAGTGAGAGGCATGGAGATTTGCCAAAGTCTCCACCGCAGCGTTACACTGGTGCCACAAGTAAAAATCGTGAGTCTACATCTCGTGGTGGCTCTGGAGGAGCTGGTGCCTCTTCCCGGCGGCAAAATGGCCGAGACTATCAGAGAAATCAACGCTATGACAATCATCGAAGCAACAAACGTCGTGACGACTGGAATAGGAATCGAGATCGATTGAATGCGTTCAGGGATGAGAAATTTAGCCTGGAGAATGGAAAAGATAGTCCGCAGGTCTCGCCCGAAAAAAAACCCTCGCCTAAGAAGCCGGCACATGCCGAAAATGAGAAACTTTCTCAGCGAGAGAAACTGATACGAGAGATCGAGAACCGTCGTCTGGAGTGCCTGGTCTGCGTCGAGCTGATCAAGAGTCACAACTCGGTGTGGTCATGCCACAATTGCTATCACATCCTTCATCTGAATTGCATTATCAAATGGGCTTCTAGTTCGAAGTCGGAAGATGGTTGGCGTTGCCCAGCATGCCAAAATGTCGAAAAGGACGTTCCACGAGATTACTTTTGCTTCTGTGGCAAAGTCAAGAGTCCACAGTTGAATCGCAACGACATAGCTCACTCTTGTGGCGAAGTGTGTGCACGCATCGATGGCTGCTCTCATGCATGCACTTTGCTGTGTCATCCCGGACCGTGTCCACCATGTCAGGCGAATGTTACACGCGAGTGTGGCTGTGGAAAGACTTCGAAGACAATGCAGTGCTATTTAAAGGAGTCGATTGAGTGTGCAGAGATTTGCCAAAAGTTGCTCAATTGTGAGTTGCATTCGTGTGAGGAGAAGTGTCACGAGGGCAAGTGTAAGCCATGCGAACATAAAGTTGATCAGAAGTGCCACTGTGGAAAACACGACAGGCAGGTGGCTTGTACCCGGGACTCGCACGAAAAGAAAAATTATTCTTGCGGCAAACCATGTGGAAGGGATCTTACTTGCGGCAATCACAAGTGCAAGGATTGTTGTCACGCTGGAGAGTGCCGTCCGTGCAAACTTAGCCCGGAAATGACCACATCATGTCCTTGTGGTAAGATGCCAATAGTTTTGGAACAGAGAAAATCCTGTCTAGATCCGATACCGGTATGCGATGGCATCTGCAACAAAACACAGCGCTGCGGTAAGGCAGCCCATCCCCATCATTGTACAACCAAGTGTCATTTGGGCAACTGTCCACCGTGCAACAAACAAACAGCAGTCAAATGTCGCTGCGGCCACATGGACCAAATGATAAAATGCCGTCAGCTCTCAACTAGAGCCGATGATGCCCGCTGCAAGAAGCGCTGCGTTAAAAAACGATCATGCGGCAAGCACAAATGCAACCAAGAGTGCTGCATCGACATCGATCACATCTGCCCGATGCCCTGTAACTATACTCTCTCCTGTGGCAAACACAAGTGCGACCAGCCGTGCCATCGGGGAAATTGTCCTCCATGCTATCGCAGCTCATTCGATGAGTTGTATTGCGAATGCGGCGCCGAGGTCATCTATCCACCAGTTCCCTGTGGCACTAAAAAGCCAGTGTGCAAGCGCCATTGCTCGCGGCAGCATCCTTGCGAGCATCCAGTTCAACATAACTGCCATTCGGCGGCGGCTTGTCCGCCGTGTATGATGTTCACCACGAAGTGGTGCTACGGACAGCACGAACAGCGGAAAACCATTCCATGCATTCAAGAGAGCTTCAGTTGTGGCCTTGCGTGCAGCAAGCCACTGTCTTGCGGACGACACAAGTGCATCAAGCCTTGTCATGAGGGACCGTGTCAAGCTGCCGGTGAGATATGTAAGCAGAGTTGCACCACTCTCCGAGCAGGGTGTGGGCATAAGTGTATGGCGCCGTGCCACGAAGGAGACTGCCCAGAGACGGCTTGTAAGGAAATGGTGGAAATTACATGTGAGTGTGGCAACCGGAAGCAGACGCGCACTTGCCAAGACTTCTCCAGGGAGTACAGACGTATAGCTACGGCCCAGTTGGCTTCATCGATGGCTGAGGTGCAACGAGGCAACACCATCGAACTGAGTGACATTCTAGGACCCGTCAAGATCAACAGTAACAAGGCCCTTGAATGCAGTGACGAGTGCCGCACATTGGAACGCAATCGTCGTCTTGCAATCGGCTTGCAAATCCGTAATCCCGATCTGCCACAGAAGCTAACAACCAAATATTCTGATTTCATCCGTGGATATGCCAAGAAAGACCCAGCACTTGTTAAGAGCATTCATGATTCGCTCACGACTCTCGTCAAATTGGCCAAGGAGAGCAAGCAAAAGTCGCGTAGCCATTCATTTCCAACAATGAAACGGGAAAAACGCCAGTTGGTGCATGAGATGTGCGAGATGTTTGGTGTAGAGTCGGTGGCCTATGATGCCGAACCGAACAGAAATGTAGTCGCTACTGCTTATAAGGACAAGTCCTGGTTGCCAGCTCAGAGCATCATGGAAGTTATTCAACGTGAAAGTGGACAAAGACGTGTTCCAGTGCCGAGCAACAATGCCTGGGGCATAAAACGCTAA
- Protein Sequence
- MSDAFHHRYHDAGGPESGNNNYINFNQFMMQHNIIQGGGGAGSSSVNVNGDIDQGSSSNPFHYNGGGYGGYQPHQVNDAYYTNGGGGTGGSGRLSNYNNFTQQRQSNYSNSNLHANAAEFVPRFSNLSLGESGAGYNSNDVADLQNANGPSTSERHGDLPKSPPQRYTGATSKNRESTSRGGSGGAGASSRRQNGRDYQRNQRYDNHRSNKRRDDWNRNRDRLNAFRDEKFSLENGKDSPQVSPEKKPSPKKPAHAENEKLSQREKLIREIENRRLECLVCVELIKSHNSVWSCHNCYHILHLNCIIKWASSSKSEDGWRCPACQNVEKDVPRDYFCFCGKVKSPQLNRNDIAHSCGEVCARIDGCSHACTLLCHPGPCPPCQANVTRECGCGKTSKTMQCYLKESIECAEICQKLLNCELHSCEEKCHEGKCKPCEHKVDQKCHCGKHDRQVACTRDSHEKKNYSCGKPCGRDLTCGNHKCKDCCHAGECRPCKLSPEMTTSCPCGKMPIVLEQRKSCLDPIPVCDGICNKTQRCGKAAHPHHCTTKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFDELYCECGAEVIYPPVPCGTKKPVCKRHCSRQHPCEHPVQHNCHSAAACPPCMMFTTKWCYGQHEQRKTIPCIQESFSCGLACSKPLSCGRHKCIKPCHEGPCQAAGEICKQSCTTLRAGCGHKCMAPCHEGDCPETACKEMVEITCECGNRKQTRTCQDFSREYRRIATAQLASSMAEVQRGNTIELSDILGPVKINSNKALECSDECRTLERNRRLAIGLQIRNPDLPQKLTTKYSDFIRGYAKKDPALVKSIHDSLTTLVKLAKESKQKSRSHSFPTMKREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357609;
- 90% Identity
- iTF_00984706; iTF_00666187; iTF_01397004; iTF_01318705; iTF_00695144; iTF_00694277; iTF_00665308; iTF_00335539; iTF_00975285; iTF_00664538; iTF_00427775; iTF_00426799;
- 80% Identity
- -