Dalb022297.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- stc
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010000309.1:808817-814083[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 3.5e+04 -4.0 1.6 15 19 326 330 325 330 0.81 2 13 0.054 1e+03 0.9 0.2 4 10 359 365 358 366 0.95 3 13 5.5e-07 0.01 16.9 15.1 1 19 371 388 371 388 0.93 4 13 3.1e-06 0.057 14.5 11.9 3 18 426 441 424 442 0.91 5 13 1.3 2.5e+04 -3.5 3.1 8 13 447 452 443 455 0.68 6 13 1.3e-07 0.0025 18.8 18.5 1 19 482 500 482 500 0.98 7 13 0.00023 4.2 8.5 16.5 4 18 548 562 541 563 0.86 8 13 0.045 8.3e+02 1.2 12.3 1 11 603 613 603 625 0.91 9 13 4.4e-10 8.2e-06 26.7 15.5 1 18 630 647 630 648 0.97 10 13 2 3.7e+04 -8.6 11.0 10 18 695 704 684 705 0.75 11 13 3.9e-08 0.00072 20.5 14.7 1 17 741 757 741 766 0.93 12 13 4.4e-07 0.0082 17.2 12.7 1 18 773 791 773 792 0.89 13 13 0.46 8.6e+03 -2.1 0.4 7 12 807 812 801 812 0.72
Sequence Information
- Coding Sequence
- ATGTCTGATGCATTCCACCATCTTTACCACGACGCAGGAGCACCTGGAAGCGGGAATAACAACAACTATATTAATTTCAATCAGTTCATGATGCAGCACAATATTATCCAAGGAGAAGGGAGAGGAGGCAATTCCTCTTCGTCGTCTGTGAATGTAAATGGAGAAATTGATCGAGGATCATCTTCGAATCCCTTTCATTACAACGGAGGAGGCTATGGTGGCTATCAGACGCACCAAGTCGATGATGCCTATTACATGAACGGAGGAGGAGGAACAGCTGGTTCTGGTAGATTGTCCAATAATTACAACAACTACACCCAACAACGCCAATCGAATTACTCCAATTCAAACCTTCATGCCAATGCAGCCGAATTCGTTCCCAGGTTTTCGAATCTTTCTCTCGGCGAAATAGGCTACAACTCCAATGACATATCTGACCTTCAGAATGCCAATGGTCCAACGACTTATCATGAGAGACATGGAGACTCGTCAAAGTCTCCACCGCAACGTTACACTGGCGCCACAAGTAAAAATCGTGAATCTACATCTCGTGGTGGTTCTGGAGGAGCTGGTGCCTCTTCCCGTCGGCAGAATGGCCGAGACTATCAGAGAAATCAGCGTTATGACAATCATCGAAGCAACAAGCGTCGCGATGACTGGAATAGAAATCGAGATCGATTGAATGCCTTCAGGGATGAAAAGTTAACTCTAGAGAACGGAAAGGACAGTCCGCAGGCCTCGCCCGAAAAGAAATCATCGCCCAAGAAGCCATCTTTTCATGCTGAAAACGAAAAACTCTCCCAACGAGAAAAACTAATGCGAGAAATCGAAGGTCGTCGCCTTGAGTGTCTGGTTTGCGTTGAGCTAATAAAGAGTCACAACTCGGTGTGGTCATGTCACAATTGCTATCACATCTTTCATCTGAATTGCATTATCAAATGGGCTTCTAGTTCGAAGTCTGAAGATGGCTGGCGCTGTCCAGCTTGTCAAAATGTCGAGAAAGACGTTCCACGAGATTACTACTGCTTCTGTGGCAAAGTCAAGAGTCCCCAGCTGAATCGCAATGACATTGCTCATTCGTGTGGCGAAGTGTGTGGACGCATCGAAGGCTGTTCCCATGCCTGTACTCTGCTCTGTCATCCCGGACCGTGTCCCCCATGTCAGGCAAATGTTACACGCGAGTGCGGCTGTGGCAAGACTTCGAAGACCATGCAGTGCTATTTGAAAGAATCAATTGAGTGTGCAGAGATATGCCAGAAGCTGCTCAATTGTGAGTTGCACATGTGTGAAGATAAGTGCCACGAGGGCAAGTGTAAGCCATGTGAACACAAAGTCGACCAGAAGTGCCACTGTGGAAAGCATGATAGACAGGTGGCTTGTACCCGGGACTCGCATGAAAAGAAAACCTACTCTTGCGGCAAACCATGTGGAAAGGATTTGAGTTGTGGTAATCACAAGTGCAAGGACTGTTGTCACGTTGGAGAGTGTCGTCCTTGCAAGCTAAGTCCCGAAATGACAACATCGTGTCCTTGTGGTAAAATGCCAATAGTTTTTGAGCAAAGGAAATCCTGCCTGGACCCGATACCCGTTTGTGATGGCATATGCAACAAGACACTACGTTGCGGCAAGGCAGCCCATCCCCATCATTGCACAACCAAATGCCATTTGGGCAATTGTCCACCGTGTAATAAGCAAACAGCAGTCAAATGTCGCTGTGGCCACATGGACCAAATGATAAAATGCCGTCAACTCTCTACCAGAGCCGATGATGCTCGCTGCAAGAAGCGCTGCGTTAAGAAACGATCCTGCGGCAAGCACAAATGCAATCAAGAGTGCTGCATCGATATCGATCACATCTGCCCGATGCCCTGTAATTATACTCTCTCCTGTGGCAAACACAAGTGTGACCAGCCATGTCATCGGGGAAATTGTCCTCCATGCTATCGTAGCTCATTCGAGGAATTGTATTGTGAATGTGGCGCAGAGGTTATATATCCACCAGTTCCATGTGGTACTAAGAAACCAGTTTGTAAGCGCCATTGCTCGCGACAACATCCTTGCGATCATCCAGTTCAACATAACTGCCATTCGGCGGCAACTTGTCCGCCATGTATGATGTTCACCACAAAGTGGTGCTACGGACATCACGAGCAGCGGAAAACCATTCCATGCATTCAGGAAAGCTTCAGTTGTGGCCTGGCGTGCAGTAAGCCGTTGCCTTGTGGAAGGCACAAGTGCATCAAACCTTGTCATGAGGGGCCATGTCAAACGGCTGGTGAGATATGTAAGCAGAGTTGCACCACTCTTCGAGCAGGGTGTGGGCATAAGTGTATGGCGCCATGCCATGAAGGGGATTGCCCAGAGACGGCTTGTAAGGAGATGGTGGAAATTACATGTGAGTGTGGCAACCGTAAGCAGGCACGAACTTGCCATGACTTCTCCAGAGAGTATAGACGTATAGCTACGGCTCAGTTGGCTTCATCGATGGCTGAAGTGCAACGAGGCAACACCATCGAGCTAAGTGACATTCTAGGACCTGTCAAGATCAACAGTAACAAGGCCCTCGAATGCAGTGAAGAGTGCCGCACATTGGAACGTAATCGTCGTCTTGCAATCGGTTTGCAAATACGTAATCCCGATCTGCCACAGAAGCTAACAACCAAATATTCTGATTTCATCCGCGGCTATGCCAAGAAAGATCTAGCTCTCGTTAAGAGCATTCACGATTCACTTACGAATCTCGTCAAATTGGCCAAAGAGAGCAAGCAAAAGTCGCGTAGCCATTCATTTCCAACAATGAAACGGGAAAAACGCCAATTGGTTCATGAGATGTGCGAGATGTTTGGTGTTGAATCGGTGGCTTATGATGCCGAGCCAAACAGAAATGTTGTTGCTACGGCTTATAAGGACAAGTCCTGGTTACCAGCTCAGAGTATCATGGAAGTTATTCAACGTGAAAGTGGACAAAGACGTGTTCCAGTGCCCAGTAACAATGCCTGGGGCATAAAGCGATAA
- Protein Sequence
- MSDAFHHLYHDAGAPGSGNNNNYINFNQFMMQHNIIQGEGRGGNSSSSSVNVNGEIDRGSSSNPFHYNGGGYGGYQTHQVDDAYYMNGGGGTAGSGRLSNNYNNYTQQRQSNYSNSNLHANAAEFVPRFSNLSLGEIGYNSNDISDLQNANGPTTYHERHGDSSKSPPQRYTGATSKNRESTSRGGSGGAGASSRRQNGRDYQRNQRYDNHRSNKRRDDWNRNRDRLNAFRDEKLTLENGKDSPQASPEKKSSPKKPSFHAENEKLSQREKLMREIEGRRLECLVCVELIKSHNSVWSCHNCYHIFHLNCIIKWASSSKSEDGWRCPACQNVEKDVPRDYYCFCGKVKSPQLNRNDIAHSCGEVCGRIEGCSHACTLLCHPGPCPPCQANVTRECGCGKTSKTMQCYLKESIECAEICQKLLNCELHMCEDKCHEGKCKPCEHKVDQKCHCGKHDRQVACTRDSHEKKTYSCGKPCGKDLSCGNHKCKDCCHVGECRPCKLSPEMTTSCPCGKMPIVFEQRKSCLDPIPVCDGICNKTLRCGKAAHPHHCTTKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRHCSRQHPCDHPVQHNCHSAATCPPCMMFTTKWCYGHHEQRKTIPCIQESFSCGLACSKPLPCGRHKCIKPCHEGPCQTAGEICKQSCTTLRAGCGHKCMAPCHEGDCPETACKEMVEITCECGNRKQARTCHDFSREYRRIATAQLASSMAEVQRGNTIELSDILGPVKINSNKALECSEECRTLERNRRLAIGLQIRNPDLPQKLTTKYSDFIRGYAKKDLALVKSIHDSLTNLVKLAKESKQKSRSHSFPTMKREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357609;
- 90% Identity
- iTF_00894449;
- 80% Identity
- -