Pros049843.1
Basic Information
- Insect
- Platycheirus rosarum
- Gene Symbol
- stc
- Assembly
- GCA_963971375.1
- Location
- OZ020510.1:106503795-106507054[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 5.2e+04 -4.0 1.6 15 19 326 330 325 330 0.81 2 13 0.054 1.5e+03 0.9 0.2 4 10 359 365 358 366 0.95 3 13 8.9e-07 0.025 16.2 14.5 4 19 373 388 371 388 0.91 4 13 2 5.6e+04 -4.8 1.3 6 10 414 418 414 418 0.95 5 13 3.9e-06 0.11 14.1 11.6 3 18 426 441 424 442 0.91 6 13 1.3 3.7e+04 -3.5 3.1 8 13 447 452 443 455 0.68 7 13 8.9e-07 0.025 16.2 18.0 1 19 482 500 482 500 0.97 8 13 7.3e-05 2 10.1 16.7 4 18 548 562 541 563 0.86 9 13 0.045 1.2e+03 1.2 12.3 1 11 603 613 603 625 0.91 10 13 2.9e-09 8.1e-05 24.1 14.9 1 18 630 647 630 648 0.97 11 13 2 5.6e+04 -11.4 15.4 10 18 695 704 681 705 0.69 12 13 9e-08 0.0025 19.4 13.6 1 16 741 756 741 766 0.88 13 13 1.3e-06 0.035 15.7 13.4 1 18 773 791 773 792 0.93
Sequence Information
- Coding Sequence
- ATGTCTGATGCATTCCATCAACGTTACCATGACGCAGGACATGGAGGCGGAAGTAATAACAACAACTACGTTAATTTCAATCAATTTATGATGCAGCACAACCTCGTTCAAGGAGCAGGCAGCGGAGGTGGTGGTGTTGCTTTCTCTTCTGGCAATGCTAATGGTGATATCGATCGGGCATCATCGTCGTCGAATCCATTCCATTACAACGGAGGTGCCTATGGTGGTTATCAGCAGCACCAAGTCGACGACTCTTACTATATGAATGGAGAAGGAGGCTCTGGCAGATTGTCCACATACAACAACTACTCTGAGCCAAGACATAACTcctattcaaattcaaatcttCATGCAAACGCCGCTGAATTCGTTCCCAGATTCTCGAATCTCTCCATAGGCGAACAGGGAAACTCGTCGAATTCCAAAGAATCCGCTGATGTGGAGAATGCTAATGGTCCATCGACTAGCAAGGGCTATGGAGATCCTACAAAATCTCAGCCGCAACGTTATACCGGCGCAATGAGTAAGAATCGCGACACCAATTCTCGTGGTGGTTCTGGAGGAGCTGGTGCCTCCTCACGTCGCCAGAATGGTCGCGACTACCAGAGAAATCAACGTTATGACAATCATCGAAGCAACAAACGTCGTGATGACTGGAACAGGAATCGAGATCGAGTGAATGCCTTCAGGGACGAGAAGTACACTCTGGAGAACGGAAAGGACAGCCCACAGGCTTCGCCTGAAAAGAAACCATCTCCCAAGAAATCCGCACCACCTCATGCCGAAAATGAGAAGCTATCGCAACGTGAGAAACTCATACGAGAGATCGAAGGACGCCGTCTGGAGTGTCTGGTGTGTGTGGAATCAATCAAGAGTCACAACTCGGTCTGGTCATGCCACAACTGTTATCACATATTCCATCTTAATTGCATCATCAAATGGGCTTCGAGTTCCAAGTCTGAGGATGGTTGGCGTTGTCCAGCATGTCAAAATGTCGAGAAGAACGTGCCACGTGATTATTATTGCTTCTGTGGCAACATCAAGAATCCACAATTGAATCGCAACGACATAGCTCATTCTTGTGGCGAAGTATGCGGACGGATTGAGGGTTGTGCGCACGCTTGCACTTTGTTGTGTCATCCTGGACCATGTCCGCCATGTCAGGCGAATGTAACTAGAGAGTGTGGATGTGGCAAGACTTCGAAGACAATGCAGTGCTATTTGAAGCAGTCGATTGATTGCAAAGAAATTTGCCAAAAGTTGCTGAATTGTGAGTTGCACTTCTGCCAGGACAAGTGCCATGAGGGCAAGTGTAAGCCGTGCGAGCATAAAGTCGACCAGAAGTGTCACTGTGGAAAGCATGATAGGCAGGTGGCTTGTACTCGGGACTCGCACGAAAAGAAGACTTACTCCTGCGGCAAGCCGTGTGCACGAGACTTGAGTTGCGGCAACCACAAATGCAAGGATTGCTGTCATGCCGGTGAGTGTCGACAATGCAAACTTAGTCCTGAAATGGTTACTTCGTGCCCATGTGGAAAGATGCCGATTGTTTTGGGGCAACGTAAATCTTGTCTGGATGTGATTCCCGTCTGCGACGGTATCTGCAACAAGACATTGCGTTGCGGCAAATCAGCCCATCCCCACCATTGCACAAGCAAATGCCATTTGGGTAATTGTCCACCGTGCAACAAGCAAACAGCAGTAAAATGTCGCTGTGGCCACATGGATCAGATGATAAAATGCCGTCTATTGTCAACCAGAGCCGATGATGCTCGTTGCAAGAAGCGGTGCGTCAAAAAACGCTCCTGCGGTAAACATAAATGCAACCAAGAGTGCTGCATCGATATTGATCACATTTGTCCGATGCCATGTAATTATACTCTGTCGTGTGGCAAACACAAGTGTGACCAACAATGTCATCGGGGAAATTGTCCTCCATGCTATCGGAGTTCTTTTGAAGAATTGTACTGTGAGTGCGGCACAGAAGTAATCTATCCGCCAGTTCCGTGTGGTACAAAGAAGCCAGTGTGCAAGAGACCCTGCTCGCGTCAGCATCCTTGCGAGCATCCAGTTCAACATAACTGCCATTCGGCGGCTGCTTGTCCGCCGTGTATGATGTTCACCACAAAATGGTGCTTCGGACAGCACGAACAACGTAAAACCATTCCATGCATCCAGGAGAGCTTCAGCTGCGGCCTGGCATGCAATAAACCGCTGTCATGTGGCCGACATAAATGCATAAAGCCTTGTCATGAGGGAGCTTGTCAAGCTGCCGGTGAGGTTTGCAAGCAGAGTTGCACCACTATTCGTTCGGGATGTGGACACAAGTGTATGACTCCGTGTCATGATGGAGATTGTCCAGAGACATCTTGTAAGGAGTTGGTGGAAATAACATGTGAATGTGGTAACCGGAAGCAGACAAGGACTTGCCAAGATTTCTCAAGAGAATATAGACGTATTGCAACCGCACAGCTTGCTTCATCCATGGCCGAGGTTCAGAGAGGAAACACCATCGAGTTGCGGGATATTCTAGGGCCTGCCAAGATCAACAGTAATAAGGCCCTTGAATGCAACGAAGAGTGTCGGACATTGGAGCGCAATCGACGCCTTGCCATCGGCTTGCAAATACGTAATCCCGATCTGCCACAGAAACTATTGACCAAATATTCTGATTTTATTCGTGGATTTGCCAAGAAAGATCCAACTCTGGTAAAGAGTATTCATGATTCTCTGACGACTCTCGtcaaattggccaaagaaagtAAGCAAAAATCACGCAGTCATTCGTTCCCGACTATGAATCGCGAGAAACGTCAATTGGTGCATGAGATGTGTGAGATGTTTGGGGTGGAATCGGTTGCCTATGATTCAGAGCCGAATAGAAATGTTGTTGCAACGGCTTTTAAGGAGAAGtcCTGGTTGCCTGCTCAAAGTATCATGGAAGTCATTCAACGTGAAAGTGGACAAAGACGTGTTCCTGTTCCAAGTAACAATGCCTGGGGCATTAAGCGTTAG
- Protein Sequence
- MSDAFHQRYHDAGHGGGSNNNNYVNFNQFMMQHNLVQGAGSGGGGVAFSSGNANGDIDRASSSSNPFHYNGGAYGGYQQHQVDDSYYMNGEGGSGRLSTYNNYSEPRHNSYSNSNLHANAAEFVPRFSNLSIGEQGNSSNSKESADVENANGPSTSKGYGDPTKSQPQRYTGAMSKNRDTNSRGGSGGAGASSRRQNGRDYQRNQRYDNHRSNKRRDDWNRNRDRVNAFRDEKYTLENGKDSPQASPEKKPSPKKSAPPHAENEKLSQREKLIREIEGRRLECLVCVESIKSHNSVWSCHNCYHIFHLNCIIKWASSSKSEDGWRCPACQNVEKNVPRDYYCFCGNIKNPQLNRNDIAHSCGEVCGRIEGCAHACTLLCHPGPCPPCQANVTRECGCGKTSKTMQCYLKQSIDCKEICQKLLNCELHFCQDKCHEGKCKPCEHKVDQKCHCGKHDRQVACTRDSHEKKTYSCGKPCARDLSCGNHKCKDCCHAGECRQCKLSPEMVTSCPCGKMPIVLGQRKSCLDVIPVCDGICNKTLRCGKSAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRLLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPMPCNYTLSCGKHKCDQQCHRGNCPPCYRSSFEELYCECGTEVIYPPVPCGTKKPVCKRPCSRQHPCEHPVQHNCHSAAACPPCMMFTTKWCFGQHEQRKTIPCIQESFSCGLACNKPLSCGRHKCIKPCHEGACQAAGEVCKQSCTTIRSGCGHKCMTPCHDGDCPETSCKELVEITCECGNRKQTRTCQDFSREYRRIATAQLASSMAEVQRGNTIELRDILGPAKINSNKALECNEECRTLERNRRLAIGLQIRNPDLPQKLLTKYSDFIRGFAKKDPTLVKSIHDSLTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDSEPNRNVVATAFKEKSWLPAQSIMEVIQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357609;
- 90% Identity
- -
- 80% Identity
- -