Basic Information

Insect: Sinelater perroti
Gene Symbol: -
Assembly: GCA_036346155.1
Location: JARFIY010000132.1:8856806-8867401[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.1e-06 0.0018 20.9 0.1 1 23 174 196 174 196 0.98

2 12 0.0012 0.35 13.6 1.6 1 23 202 224 202 224 0.97

3 12 1.9e-05 0.0056 19.3 3.1 1 23 230 252 230 252 0.98

4 12 0.00016 0.045 16.4 1.4 3 23 266 286 264 286 0.95

5 12 5.8e-05 0.016 17.8 0.9 2 23 293 314 292 314 0.97

6 12 4.3e-07 0.00012 24.5 1.8 1 23 320 342 320 342 0.99

7 12 7.5e-06 0.0022 20.6 0.2 1 23 348 370 348 370 0.96

8 12 4.1e-06 0.0012 21.4 0.1 1 23 376 398 376 398 0.98

9 12 6.3e-07 0.00018 24.0 2.5 1 23 404 426 404 426 0.99

10 12 3.4e-06 0.00098 21.7 2.8 1 23 432 454 432 454 0.97

11 12 3.6e-06 0.001 21.6 0.1 3 23 462 482 461 482 0.98

12 12 1.3e-06 0.00036 23.1 0.4 1 23 488 510 488 510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.1e-06	0.0018	20.9	0.1	1	23	174	196	174	196	0.98
2	12	0.0012	0.35	13.6	1.6	1	23	202	224	202	224	0.97
3	12	1.9e-05	0.0056	19.3	3.1	1	23	230	252	230	252	0.98
4	12	0.00016	0.045	16.4	1.4	3	23	266	286	264	286	0.95
5	12	5.8e-05	0.016	17.8	0.9	2	23	293	314	292	314	0.97
6	12	4.3e-07	0.00012	24.5	1.8	1	23	320	342	320	342	0.99
7	12	7.5e-06	0.0022	20.6	0.2	1	23	348	370	348	370	0.96
8	12	4.1e-06	0.0012	21.4	0.1	1	23	376	398	376	398	0.98
9	12	6.3e-07	0.00018	24.0	2.5	1	23	404	426	404	426	0.99
10	12	3.4e-06	0.00098	21.7	2.8	1	23	432	454	432	454	0.97
11	12	3.6e-06	0.001	21.6	0.1	3	23	462	482	461	482	0.98
12	12	1.3e-06	0.00036	23.1	0.4	1	23	488	510	488	510	0.98

Sequence Information

Coding Sequence: ATGGACATGAGCGTATACCTGACCGCGCCCCTGCAGCTGGACAAGATCTGCAGGGCGTGTCTGACCGAAAAGGGCGACATGCGGCCCCTGTTTGGGGCCTGCCTCGACGAAATGCTGGTCTCGTTCGCCTCTATCCAGGTTCACGAAAATGATGGTCTTCCAAACCTCATGTGCGTCCAATGTGTCCTGCAGTGCAGCCGTGCATACACATTCAAGCAACAATGCGAAAAATCTGACAACATCCTGCGGCAGTACACAAGCCCAGAATTTCAGGAACAACTAATCAAAACAATGATGGACACCACAAAACAAGAGATTCTGCACGAAGAACTAGAATTCACAGATGTTAAAGACACCATAGAGGGGGAAGAAATCCCTGCAGAACTTGTCAATGTGAGCTATGCCGAGGACGGATCTTACAAAATTGAAGTTAAAGGAGACATTTATAATGTGACATCCGATGGCACTGAACTGGTAAAAAAGGAAATCCTCATAGAAGAGAAGTCACAGAAGCACAAGTATCCTTGTCCAAAATGTGAAGAATCTTTCCCACTGAAAGTggatttaaagGTGCATATGATGAGCCATCCCAAGGAACTGGATCATGTCTGCCACGTTTGCAACAAGGGCTTCCCAGAAGCACGCATTTTAAAGCGGCATTTGAAGATCCATCTTGATAAAAAACCTCATCAGTGTGACCAGTGCGATATGTCATTTGCTGAGAGTTCTAATTTGagcaaacataaaaagaaacacACTGGAGAGCTGCGCAACATTAAAGGCAAGCCTCATTTGTGCTCAGTTTGCGGTCGTGCTTTTAAATGGGCATCAAGCTTATCAAAGCATATGAAATATCATACAGGTCACAAACTGCTTACTTGTAAATACTGCAACAAACAATACGTAGAAGCTAGAAGTTTACGAATTCACTTAAGATCTCATACTGGAGAACGACCATATGTTTGTGATATATGTCAGAAAAGTTTCACACAAGTttgtaatttagaaaaacacTTACGAGTTCACACCGGCGAAAAACCTTTTCTATGTCCCACTTGTGGCAAAGGATTTACGCAGTCAGGTTATGTTGGGATTCATATGCGAACTCATACTGGGGAAAGACCATATGTTTGCACCACTTGTGGTAAAGCCTTTGCTGGATCCAATACGTTGGCAATTCATCAGCGCATTCATACTGGGGAGAAGCCTTATACTTGCAATCTCTGTGGGAAGTCCTTCAGCAGACATGAAACTTTAGTCATTCATACCAGGTCGCATACAGGGCACAAACCTCACATTTGCTCTGTGTGTAATAAAGGTTTTACGTCTTCTGGTCATCTTTCTGGTCATATGAGAACACACACCGGAGAGAAGCCTCACGGTTGTGGTGTTTGCGGAAAAAGGTTTGCTGGTTCGAGCAGCTTAAAAGTGCACATGCGTGGGCACTCGGGAGAGAAACCTTATATTTGCAAGTTGTGCAATAAGGCGTTTGTGCAATCTAGCACACTGCAGCAACATGTAGCCACGCACACCATTGTTGCAAAGTCAAAATTGGATAAGGTGGAAACTGTACAAGTTGCTGAATTGATAACTGGAGAGTCTGTTCATGCAGTGCAAGTGCAAGCTATTAgttctatttaa
Protein Sequence: MDMSVYLTAPLQLDKICRACLTEKGDMRPLFGACLDEMLVSFASIQVHENDGLPNLMCVQCVLQCSRAYTFKQQCEKSDNILRQYTSPEFQEQLIKTMMDTTKQEILHEELEFTDVKDTIEGEEIPAELVNVSYAEDGSYKIEVKGDIYNVTSDGTELVKKEILIEEKSQKHKYPCPKCEESFPLKVDLKVHMMSHPKELDHVCHVCNKGFPEARILKRHLKIHLDKKPHQCDQCDMSFAESSNLSKHKKKHTGELRNIKGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLTCKYCNKQYVEARSLRIHLRSHTGERPYVCDICQKSFTQVCNLEKHLRVHTGEKPFLCPTCGKGFTQSGYVGIHMRTHTGERPYVCTTCGKAFAGSNTLAIHQRIHTGEKPYTCNLCGKSFSRHETLVIHTRSHTGHKPHICSVCNKGFTSSGHLSGHMRTHTGEKPHGCGVCGKRFAGSSSLKVHMRGHSGEKPYICKLCNKAFVQSSTLQQHVATHTIVAKSKLDKVETVQVAELITGESVHAVQVQAISSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00950082; iTF_00399748; iTF_01292102; iTF_00270149; iTF_01294096; iTF_00927953; iTF_00268822; iTF_00271547; iTF_00272989; iTF_00789544; iTF_00854379; iTF_00978611; iTF_00641749; iTF_00951126; iTF_01295382; iTF_00422908; iTF_01284958;
90% Identity: -
80% Identity: -