Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458322.1:10607239-10610208[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.4e-06 9.4e-05 23.8 0.1 1 23 178 200 178 200 0.98

2 12 0.014 0.93 11.2 3.5 1 23 206 228 206 228 0.96

3 12 3.7e-05 0.0024 19.3 3.1 1 23 234 256 234 256 0.98

4 12 0.0003 0.02 16.4 1.4 3 23 270 290 268 290 0.95

5 12 0.00016 0.011 17.3 0.7 2 23 297 318 296 318 0.97

6 12 8.2e-07 5.4e-05 24.5 1.8 1 23 324 346 324 346 0.99

7 12 5.6e-06 0.00037 21.9 0.1 1 23 352 374 352 374 0.96

8 12 9.3e-06 0.00061 21.2 0.1 1 23 380 402 380 402 0.98

9 12 1.1e-06 7.4e-05 24.1 1.5 1 23 408 430 408 430 0.98

10 12 7.7e-06 0.00051 21.4 2.1 1 23 436 458 436 458 0.97

11 12 2.5e-06 0.00016 23.0 0.2 3 23 466 486 465 486 0.99

12 12 0.00034 0.022 16.3 3.4 1 23 492 514 492 514 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.4e-06	9.4e-05	23.8	0.1	1	23	178	200	178	200	0.98
2	12	0.014	0.93	11.2	3.5	1	23	206	228	206	228	0.96
3	12	3.7e-05	0.0024	19.3	3.1	1	23	234	256	234	256	0.98
4	12	0.0003	0.02	16.4	1.4	3	23	270	290	268	290	0.95
5	12	0.00016	0.011	17.3	0.7	2	23	297	318	296	318	0.97
6	12	8.2e-07	5.4e-05	24.5	1.8	1	23	324	346	324	346	0.99
7	12	5.6e-06	0.00037	21.9	0.1	1	23	352	374	352	374	0.96
8	12	9.3e-06	0.00061	21.2	0.1	1	23	380	402	380	402	0.98
9	12	1.1e-06	7.4e-05	24.1	1.5	1	23	408	430	408	430	0.98
10	12	7.7e-06	0.00051	21.4	2.1	1	23	436	458	436	458	0.97
11	12	2.5e-06	0.00016	23.0	0.2	3	23	466	486	465	486	0.99
12	12	0.00034	0.022	16.3	3.4	1	23	492	514	492	514	0.98

Sequence Information

Coding Sequence: ATGGATATGAGTGTATATTTAACTGCTCCCTTGCAGCTGGACAAAATCTGCAGGGCATGCTTGACCGAAAAAGGCGACATGAGACCATTATTTGGAGCCTGTCTCGATGAAATGCTCGTTTCGTTCGCCTCCATTCAGgTCCACGAAGGTGATGGCATGCCGAACCTTATGTGTGTTCAGTGCGTACTTCAGTGCAGTCGGGCATACACTTTTAAACAACAATGTGAAAAATCGGAGAACATTTTACGACAATACATGAGCAGGGAATTTCAAgAACAATTATCGAAATCGTTAGCTGATCAGCAGACGAAAGCAGAACTTCAAGAGCAGTTACAATTTGCAGACAATGTTGAAGGAGTGGTAATGGAAAGCGATTTGGGAACTGATTTCGATTATACTGAAGTTCCATGCATTGAGGTGAAAACAGAGTTATTCACTATGGACGGTGTGGCCACTAAAACTGAATTGATCGATCCTATTGAAATTTCCCAAGAAGAATCGGAAGATCTTGATAGAAAaaccaaattaaaatatccCTGTCCAAAATGTGGAGAGTCATTTGCGTTAAAAGTAGATTTAAAGgTACACATGATGAGCCATCCAAAAGAGCTTGATCACATATGCCACGTTTGCCACAAAGGATTCCCCGAAGCTCGCATATTAAAgcgtcatttaaaaattcatctCGATAAGAAGCCTCACCAATGTGATCAGTGTGATATGTCCTTTGCGGAGAGTTCCAATTTAAGTAAGCACAAAAAGAAACACACAGGCGAACTGCGAAATATAAAAGGCAAACCCCATTTATGTTCGGTTTGTGGTCGAGCCTTCAAATGGGCGTCAAGTTTATCGAAGCATATGAAGTACCACACAGGTCATAAGTTACTCACTTGTAAATATTGCAGCAAACAGTATGTTGAGGCGAGAAGCCTCAGAATTCATATTCGATCCCACACTGGAGAAAGACCATACGTCTGTGATATTTGTCAGAAAAGTTTTACTCAAGTGTGCAATTTAGAGAAACATTTAAGAGTCCACACAGGTGAAAAGCCGTTCTTGTGTCCGATTTGCGGCAAAGGTTTCACACAGTCTGGTTATGTTGGGATTCACATGAGAACACACACAGGGGAGAAGCCCTATGTTTGTTCTACTTGTGGAAAAGCTTTTGCAGGCTCCAACACTTTAGCAATTCATCAAAGAATTCATACCGGTGAAAAACCGTATCCGTGCAATCTCTGTGGGAAATCATTTAGTCGGCATGAAACTTTAGTAATACACACAAGATCTCACACGGGACACAAACCACATATATGTGGTGTTTGCAATAAGGGGTTCACGTCATCGGGACACCTCTCGGGGCATATGAGAACGCACACAGGGGAAAAACCCCACGGATGCAACGTTTGTGGAAAAAGattTGCGGGCTCGAGCAGTTTGAAGGTGCATATGAGAGGTCATTCAGGTGAAAAACCgtttgtttgtaaatattgcTGTAAAGGTTTCGCTCAGTCGAGCACACTTCAACAGCATTTAAGTACACATACGGTGATATCAAAATCTAAGACGACTAAAGTTGAACCGTTGCAAATTACTCAAATAATtcccgggGAAACCGTACATACGGTGCAAATTCAAGCAATAAGTTCAATTTAa
Protein Sequence: MDMSVYLTAPLQLDKICRACLTEKGDMRPLFGACLDEMLVSFASIQVHEGDGMPNLMCVQCVLQCSRAYTFKQQCEKSENILRQYMSREFQEQLSKSLADQQTKAELQEQLQFADNVEGVVMESDLGTDFDYTEVPCIEVKTELFTMDGVATKTELIDPIEISQEESEDLDRKTKLKYPCPKCGESFALKVDLKVHMMSHPKELDHICHVCHKGFPEARILKRHLKIHLDKKPHQCDQCDMSFAESSNLSKHKKKHTGELRNIKGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLTCKYCSKQYVEARSLRIHIRSHTGERPYVCDICQKSFTQVCNLEKHLRVHTGEKPFLCPICGKGFTQSGYVGIHMRTHTGEKPYVCSTCGKAFAGSNTLAIHQRIHTGEKPYPCNLCGKSFSRHETLVIHTRSHTGHKPHICGVCNKGFTSSGHLSGHMRTHTGEKPHGCNVCGKRFAGSSSLKVHMRGHSGEKPFVCKYCCKGFAQSSTLQQHLSTHTVISKSKTTKVEPLQITQIIPGETVHTVQIQAISSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01345867;
90% Identity: -
80% Identity: -