Basic Information

Insect: Elmis aenea
Gene Symbol: -
Assembly: GCA_947652605.1
Location: OX393580.1:24029742-24032797[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.6e-07 6e-05 24.2 0.2 1 23 174 196 174 196 0.98

2 12 0.00057 0.075 14.4 1.6 1 23 202 224 202 224 0.97

3 12 1.6e-05 0.0021 19.3 3.1 1 23 230 252 230 252 0.98

4 12 0.00013 0.017 16.4 1.4 3 23 266 286 264 286 0.95

5 12 7e-05 0.0091 17.3 0.8 2 23 293 314 292 314 0.97

6 12 6.4e-07 8.3e-05 23.7 1.8 1 23 320 342 320 342 0.98

7 12 5.5e-07 7.2e-05 23.9 0.2 1 23 348 370 348 370 0.96

8 12 3.4e-06 0.00045 21.4 0.1 1 23 376 398 376 398 0.98

9 12 5.2e-07 6.9e-05 24.0 2.5 1 23 404 426 404 426 0.99

10 12 3.3e-06 0.00044 21.5 2.1 1 23 432 454 432 454 0.97

11 12 3e-06 0.00039 21.6 0.1 3 23 462 482 461 482 0.98

12 12 4.9e-07 6.4e-05 24.1 1.4 1 23 488 510 488 510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.6e-07	6e-05	24.2	0.2	1	23	174	196	174	196	0.98
2	12	0.00057	0.075	14.4	1.6	1	23	202	224	202	224	0.97
3	12	1.6e-05	0.0021	19.3	3.1	1	23	230	252	230	252	0.98
4	12	0.00013	0.017	16.4	1.4	3	23	266	286	264	286	0.95
5	12	7e-05	0.0091	17.3	0.8	2	23	293	314	292	314	0.97
6	12	6.4e-07	8.3e-05	23.7	1.8	1	23	320	342	320	342	0.98
7	12	5.5e-07	7.2e-05	23.9	0.2	1	23	348	370	348	370	0.96
8	12	3.4e-06	0.00045	21.4	0.1	1	23	376	398	376	398	0.98
9	12	5.2e-07	6.9e-05	24.0	2.5	1	23	404	426	404	426	0.99
10	12	3.3e-06	0.00044	21.5	2.1	1	23	432	454	432	454	0.97
11	12	3e-06	0.00039	21.6	0.1	3	23	462	482	461	482	0.98
12	12	4.9e-07	6.4e-05	24.1	1.4	1	23	488	510	488	510	0.98

Sequence Information

Coding Sequence: ATGGATATAAGTGTGTATTTAACGGCACCCCTGCAACTGGATAAAATTTGTAGGGCCTGTTTAACTGAAAAGGGTGATATGAGGCCCCTGTTTGGTGCCTGTCTTGATGAAATGTTGGTGTCTTTTGCTTCCATTAAGGTACATGAAGGCGATGGATTTCCGAATCTTATGTGTGTCCAATGTGTACTACAGTGTAGTCGTGCATACACTTTTAAACAACAGTGCGAAAAATCTGATAATATTTTACGACAATACATGAGCACAGACTTTCAGGAACAGCTTTCAAAAGCTATGGTCGAAGCAAAAGAGGAGCTACAAGATGAACTTCATTTTACCGATAATATTGAGACCGTCATAGAAGGAGAATTACCGGCAGAGCTAGTACATGTTACTTATACTGATGAAGGAACGTGCAACATTGAGGTTAAATCGGAATTGTATGACATGGACACGACATCAGGATTAGATCCTTCGGATTTAGAAAAACATGATCTAGGCATGAAACCTTCAAAACTTAAATATCCCTGCCCAAAATGTGATGAATCTTTTACGCTGAAAGTCGATTTAAAGGTACACATGATGAGCCATCCCAAAGAACTGGATCACGTCTGCCACATTTGCAATAAAGGTTTCCCGGAAGCACGGATCTTAAAACGGCACTTAAAAATTCATCTCGACAAGAAGCCCCACCAGTGTGACCAATGCGATATGTCGTTTGCAGAAAGTTCCAATTTAAGTAAACATAAAAAGAAGCATACAGGAGAATTACGGAACATTAAAGGCAAGCCCCATTTATGCTCGGTTTGTGGGAGAGCGTTTAAATGGGCCTCGAGTTTATCCAAGCACATGAAGTACCACACAGGACATAAACTTCTCACCTGCAAGTATTGCACGAAGCAATATGTCGAGGCTaggagtcttcgaattcacatacgatctcatacaggtgaacgcccgtatgtctgcgacgtttgtcagaaaagttttactcaagtttgtaatttggaaaagcatctaagagtccacacgggagaaaaaccatttttgtgcccaatttgcggaaaaggTTTTACGCAGTCTGGTTatgttagcattcacatgagaacccacacaggagaacgtccttatgtctgtacaacttgcggtaaagcctttgccggttcgaataccctagcgattcatcaacgaattcacacgggagaaaagccttacacttgcaatttatgtgggaagtctttcagtcgtcacgaaaccttagttattcacaccagatctcataccggtcacaaaccgcatatttgcggggtttgtaacaagggattcacatcgtcgggacatttatcgggacacatgcgcacccatacaggggagaagccccatggttgtggagtttgcgggaaaagatttgccggatcgagcagcctaaaagtgcacatgcgaggacattccggagaaaaaccattcatttgcaagtactgcggaaaaggatttgttcaagcgagtacgttacatcagcacattagcacccataccgTCGTAGCAAAGTCTAAACTTGCTAAAGTGGAGACTGTACAAGTTGCAGAATTAATAACTGGTGATACTGTTCACACTGTGCAGGTTCAAGCAATAAATTCCATATAA
Protein Sequence: MDISVYLTAPLQLDKICRACLTEKGDMRPLFGACLDEMLVSFASIKVHEGDGFPNLMCVQCVLQCSRAYTFKQQCEKSDNILRQYMSTDFQEQLSKAMVEAKEELQDELHFTDNIETVIEGELPAELVHVTYTDEGTCNIEVKSELYDMDTTSGLDPSDLEKHDLGMKPSKLKYPCPKCDESFTLKVDLKVHMMSHPKELDHVCHICNKGFPEARILKRHLKIHLDKKPHQCDQCDMSFAESSNLSKHKKKHTGELRNIKGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLTCKYCTKQYVEARSLRIHIRSHTGERPYVCDVCQKSFTQVCNLEKHLRVHTGEKPFLCPICGKGFTQSGYVSIHMRTHTGERPYVCTTCGKAFAGSNTLAIHQRIHTGEKPYTCNLCGKSFSRHETLVIHTRSHTGHKPHICGVCNKGFTSSGHLSGHMRTHTGEKPHGCGVCGKRFAGSSSLKVHMRGHSGEKPFICKYCGKGFVQASTLHQHISTHTVVAKSKLAKVETVQVAELITGDTVHTVQVQAINSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01345867;
90% Identity: -
80% Identity: -