Spal009784.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- pnr
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000116.1:1230709-1235332[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4 7.4e+03 -3.3 0.6 18 25 61 68 58 68 0.73 2 3 1.2 3.8e+03 -2.4 0.1 1 6 271 276 267 278 0.65 3 3 5.7e-17 1.7e-13 49.9 3.0 1 35 753 786 753 787 0.98
Sequence Information
- Coding Sequence
- ATGTATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAACGAGTGCGATATTGCAGATCTACAAATTTATAACTCAAGTAGTGAGACTAGCAGCAGTCCCCATGAAAAATATAAAGCGCAACATAATCACAACGTGAAATCGTGCAATATTAATGAAAATGTATCCAAATGCGTTTGCAATGCCTTCGACCCAAATACATGTTGCTGTCAGTGTGATGATGATGATAACTCGTTATCAGACGTCGTCGCGCAATGCAATAATAATGAGACGGGTGGCTCATTCAATTCACATATGCATAAAAACAATTACACCACACCGAGTGTGCCTTCTTCTGCTGCTGCTGCTACTGCTACTGCTTCTGCTTCTGCCAACCCGCCATGCACCAATATCTATGCTCGAATGTTTCCAAATAAAAAACGGCTGCAAACTGAAACGACAGCAGCTGAATTACAATTTCAATCATCATCCACATCATCCTCAACAACAACAACAGCAACAGCCACACAAGATTTAGAACCTCAAAAAAGAGTTACTATATGCGAATCGGAGCAATCATTTTCACAATCGTGCCAATCGAATGTGGCCTACGATAATACGGCAAAGACAGCAACAACAACAGCAACAGCAACAACGGCTACAGAAACAACTCCCACTAAAAATATATTTCTTCAAAACGTGGAGTACAATCAAGAGCATAAAGATGATTCATCACCGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTATCCATCCGTCGTTTGCCATGACTGCCGAACCAAGCTTGAATCATTTTGGAAATTTCGCAATATGGCACTTAATTCACATTATGCTTTAAGGGAATTTTTGACATTAACCGAAACGTCTAAACTTAATCAAAACAATTTGGAAATGAAACTGGATGAAATTTTAAAGTCTTCATCGGAAGCAATTGCTGCAAAGGCACTGACTGAGCTGAGCAAATCTTCAAAAACAAGATACAGCCAACGGCAACCAACACTTGATGGTATTTTAAAATCGAATAAGGACAAGTCGGATCGTTCGATTGTTGCTGATAATCAAATTAAGGAGTTCCAAACGCCTTTAATCTACTCAAATTTATACGAAATCTCAAGTCAACAGCAACAATCGACCGAAAGAGATGCAATTTCAATGGTTCAAGACAGTATTGCAGCGGCAACGGCATCGGCAGCTGCTGCACCCAAGCATAATATTTCAGATAGATATATGGAATTAGACAATGGTGTGGAGTTAAAGAACACAAAAGTTTCAGATGTTGAACAATACAAGAAGCAATTAGAGACTGCCGCGGTGCTAATGGACATAAGTAAAAAGATTGTCATATCGCCACCATGCTCGAATCCTCAATCTCCTTGTCTTTCTGCATTTGTCGATACAAATATGAAAAGTTCTGTGATAAAATCAAAACGTCCATCAAATGATAATGATATGCAAGATGGTGTTGAAATCGATCTATCCATCAAAAAGCTGAAAAATGAATATTGCAGTCAACCACAACAACAACAACAACAGAATTTAGTACCAGCTGTAACACGTAATATATGCCAACCACCCCCAATCCATGATATTCATGCAAGTCCTCTAAGGACCGATGCTGATTTTAAGATTTATAGTATTACGAACAATGATGTTGGCCCTTCTAGCTATCAATTGAACACAAATAAAAAACTGAATACCGACAGTATTGCACCGTGTCTAACGGACTCGGAAGACAGTTCCGATTCAAATAAATTAGAAATGGACATCGCATCTGCGATCTATGATAGAAAGACACCAGAGAGCGTTAGCTCCGATCATGCAACAGATGCTGCTACCACTCAATTATGGCAAGCCTTAGCTCGATCGGCCGCTAAAAGTAAAGATGAGAGTCGAGCAACGCAACTTTTGCGAAATATGATGAGCCAATCATTTGTATTTCCTGCACCGTCAACTATAGCATTGACAAAAGTACCTGATGAGCCAATACCACTATTAAAGGACATGTCAGAATCTCAATCGAACGTTGTTAAAGTATGTCGAAGAAAGCAAAGTTTTCCTACTAAATCTGATTGCGTCGAGGCCCCCGACACCAAGGTGTCCGACACCTTTGTTCGTTCAGAAACAACAAATCCCGAAGGCAACAAAGATAAAAAGAGTCTAAAATGTATTAGCAGCACTGCTTTGTCCACTTCTCAAAAGGATATGTCCTGCTCGAATTGTGGCACTTTAACAACAACAATTTGGAGACGCAGCGCCCGAGGCGAAATGGTTTGCAATGCATGTGGATTATACTTTAAATTGCATGGCGTCAATCGACCCCATTCAATGCGACGCGATACCATCCATACGCGGCGCAGGCGTCCAAAAGAGTGCGAGAAATCAAAGAAAAGAAATAGGCAATTAGCATGCAATTCGGCGGTCGAATTTGAAACGGATAACATAAATAGCTCCATGGAATGCAAGAAGCCAGATATGTCCATAAGTCAAGAGACTCCAACTTTTTCAGATTCAGTATTTAACAAATATAAAACGGAAATATCTGAGACAGTGGGAAACAGTGCAGAAACACTCAAAGATGTTATTTTAAAACAAACAAAATCACAATCTTTGCCTGAGTTCAATGATAGCCCGGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATAATGCAAAGTTAACATACAACGCCAAATAA
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNECDIADLQIYNSSSETSSSPHEKYKAQHNHNVKSCNINENVSKCVCNAFDPNTCCCQCDDDDNSLSDVVAQCNNNETGGSFNSHMHKNNYTTPSVPSSAAAATATASASANPPCTNIYARMFPNKKRLQTETTAAELQFQSSSTSSSTTTTATATQDLEPQKRVTICESEQSFSQSCQSNVAYDNTAKTATTTATATTATETTPTKNIFLQNVEYNQEHKDDSSPPHITIQIFNCLSIKPLPNDSYPSVVCHDCRTKLESFWKFRNMALNSHYALREFLTLTETSKLNQNNLEMKLDEILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILKSNKDKSDRSIVADNQIKEFQTPLIYSNLYEISSQQQQSTERDAISMVQDSIAAATASAAAAPKHNISDRYMELDNGVELKNTKVSDVEQYKKQLETAAVLMDISKKIVISPPCSNPQSPCLSAFVDTNMKSSVIKSKRPSNDNDMQDGVEIDLSIKKLKNEYCSQPQQQQQQNLVPAVTRNICQPPPIHDIHASPLRTDADFKIYSITNNDVGPSSYQLNTNKKLNTDSIAPCLTDSEDSSDSNKLEMDIASAIYDRKTPESVSSDHATDAATTQLWQALARSAAKSKDESRATQLLRNMMSQSFVFPAPSTIALTKVPDEPIPLLKDMSESQSNVVKVCRRKQSFPTKSDCVEAPDTKVSDTFVRSETTNPEGNKDKKSLKCISSTALSTSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACNSAVEFETDNINSSMECKKPDMSISQETPTFSDSVFNKYKTEISETVGNSAETLKDVILKQTKSQSLPEFNDSPAGEELSVPLNLVSSENNNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01321572; iTF_01326055; iTF_01326824; iTF_01328264; iTF_01324558; iTF_01322302; iTF_01320850; iTF_01320851;
- 90% Identity
- -
- 80% Identity
- -