Sfla015922.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- pnr
- Assembly
- GCA_003952975.1
- Location
- RKRM01000111.1:165157-171495[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3 6.3e+03 -3.2 0.6 18 25 61 68 58 68 0.73 2 3 1.3 3.5e+03 -2.4 0.1 1 6 253 258 249 260 0.65 3 3 5.4e-17 1.5e-13 50.0 3.0 1 35 723 756 723 757 0.98
Sequence Information
- Coding Sequence
- ATGTATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAACGAGAGCGATATTGCAGatctacaaatatataatacaaGTAGTGAGACAAGCAGCAGTCccaatgaaaaaaataaaacccaacATAATCATAACGTGAAGTCGTGCAATATTAATGAAAATGTATCCAAATGCGTCTGCAATGCCTTCGACCCAAATACATGTTGCTGTCAatgtgatgatgatgataactTGTTATCAGCCGTCGTCGCGCAATGCAATAATAATGAGACGGGGGGCTCATTTAATtcacatatgcataaaaacaattacacCACACCGAGTGTgccttctgctgctgcttctgcttctgccaACCCGCCATGCACCAATATCTATGCTCGAATGTTTCCAAATAAAAAACTGCTGCAACCCGaaacgacagcagcagaatTCCAATTTCAATCATCatcctcaacaacaacaacagcaacacaagatTTAGAGCCTCCAAAAAGAGTTATATGCGAAACGGAGCAATCATTTTCACAATCGTGCCAATCGAATTTGGTCTACGATAATACggcaaatacaacaacaacggttacagcaacaactcccactaaaaatatatttcttgaAAACGTGGAGTACAATCAAGAGCATAAAGATGATTCATCACCGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCAAACGATAGTTATCCATCCGTCGTTTGCCGTGACTGCCGAACCAAGCTTGAATCATTTTGGAAGTTTCGCAACATGGCACTTAATTCACATTATGCTTTAAGGGAATTTTTGACATTATCAGAATCTTCTAAACTTAATCAAAACAATTTGGAAATGAAACTGGAAGCAATTTTAAAGTCTTCTTCTGAAGCAATAGCTGCAAAGGCACTGACTGAGCTGAGCAAATCTTCAAAATCAAGATACAGCCAACGACAACCTACGCTTGGTggtattttaaaatcaaataaggACAAGGATCGTCAGATTGTtgatgataaaaataaagagttTCAAACGCCTTTAATGTATTCAAGTTTGTACGAAATCCCAAATCAACAACCGACTGTCAACACAATTGAAAGAGATGCAATTATGGTTCAAGATAGtattgcagcagcaacggcgGCAGCTGCACCCAAACTTAAAATATCGGATAGGTATTTGGAATTGGACAACGGTGTGGAatcgaaaaatacaaaaatttcaGATGTTGAACAATATAAGAAGCAATTAGAGACTGCCGCGGTGCTTATGGACATTAGtaaaaaaattgtcatttcGCCACCAAGCTCGAATCCCCAATCTCCTTGTCTTTCTGCATTTGTagaaacaaatatgaaaagttcTGTGATAAAATCAAAACGTCCTTCAAATGATAATGATATGCAAGATGGTGTTGAAATCGATCTATCCATCAAAAAGCTGAAAAATGAATATTGCAGTCAACAGAATTTAGTACCAACCACACGTAATATATGCCAACCCCCCATACTTGATATTCATGCAAGTCCTATAAGGGCCGATGCTGATTTTAAGAATTATAGTATTACTATTAATGAAGGTGGCCCCTCCAGTTACCaattgaacacaaaaaaactgaataccGACAGTATTGCTTCGTGTCTATCGGACTCTGAAGACAGCTCCGattcaaataaattagaaaTGGACATCGCATCTGCTATATACGATAGAAAGACACCTGAGAGTGTGAGTTCAGATCATGCAACAGATGCTGCTACTACTCAATTATGGCAAGCATTAGCTCGATCGGCCGctaaaaataaagatgAGAGTCGAGCCACGCAACTTTTGCGAAATATGATGAGTCAATCATTTGTATTTCCTGCGCCGTCAACTATTGGATTGACTAAAGTACCTGATGAGCCAATACCACTATTAAAGgACATGTCAGAATCTCAATCGAACGTTGTTAAAGTATGTCGAAGAAAGCAAAGTTTTCCTACTAAATCTGATTGCGTCGAGGCCACAGAAACTAAGGTGTCCGACACCTTTGTTCGTTCAGAATCAAAAAATCAAGAAGGAATCAAAGATAAAAAGAGTCTTAAATGCATCAGCAGCACTGCTTTGTCCACTTCTCAAAAGGATATGTCATGCTCTAATTGTGGcactttaacaacaacaatttggaGACGCAGCGCCCGAGGAGAAATGGTTTGTAATGCATGTGGATTATACTTCAAATTGCATGGCGTCAATCGACCCCATTCAATGAGACGTGATACCATCCATACTCGGCGCAGGCGTCCAAAGGAATGCGAGAAATCGAAAAAAAGAAATAGGCAATTGGCATGTAATTCGGCGGTAGAATTTGAAACGGATAACATAAATAGCTCCATAGAATGCAAGAAGCCAGATTTGTCCATAAGTTCGGAGACACCCACTTTTTCAGATTCAGTATTTAACAAATATAAAACGGAAATATCTGAGACAGTGGGAACTGCAGAAACACTAAAAGatgttattttaaaacaagCAAAATCACAATCTTTGCCTGAGTTCAATGAAACCCACGTAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAACgccaaataa
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNESDIADLQIYNTSSETSSSPNEKNKTQHNHNVKSCNINENVSKCVCNAFDPNTCCCQCDDDDNLLSAVVAQCNNNETGGSFNSHMHKNNYTTPSVPSAAASASANPPCTNIYARMFPNKKLLQPETTAAEFQFQSSSSTTTTATQDLEPPKRVICETEQSFSQSCQSNLVYDNTANTTTTVTATTPTKNIFLENVEYNQEHKDDSSPPHITIQIFNCLSIKPLPNDSYPSVVCRDCRTKLESFWKFRNMALNSHYALREFLTLSESSKLNQNNLEMKLEAILKSSSEAIAAKALTELSKSSKSRYSQRQPTLGGILKSNKDKDRQIVDDKNKEFQTPLMYSSLYEIPNQQPTVNTIERDAIMVQDSIAAATAAAAPKLKISDRYLELDNGVESKNTKISDVEQYKKQLETAAVLMDISKKIVISPPSSNPQSPCLSAFVETNMKSSVIKSKRPSNDNDMQDGVEIDLSIKKLKNEYCSQQNLVPTTRNICQPPILDIHASPIRADADFKNYSITINEGGPSSYQLNTKKLNTDSIASCLSDSEDSSDSNKLEMDIASAIYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQLLRNMMSQSFVFPAPSTIGLTKVPDEPIPLLKDMSESQSNVVKVCRRKQSFPTKSDCVEATETKVSDTFVRSESKNQEGIKDKKSLKCISSTALSTSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACNSAVEFETDNINSSIECKKPDLSISSETPTFSDSVFNKYKTEISETVGTAETLKDVILKQAKSQSLPEFNETHVGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01325321;
- 90% Identity
- iTF_01321572;
- 80% Identity
- -