Spol005758.1
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- pnr
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010000676.1:9710512-9714697[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4 1e+04 -3.2 0.6 18 25 61 68 58 68 0.73 2 4 1.7 5.3e+03 -2.3 0.5 2 9 90 97 90 98 0.87 3 4 1.9 5.8e+03 -2.4 0.1 1 6 254 259 250 261 0.65 4 4 8.2e-17 2.5e-13 50.0 3.0 1 35 723 756 723 757 0.98
Sequence Information
- Coding Sequence
- ATGTATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGTCTCACTTTGGTTAATGAGTGCGATATTGCAGATctacaaatatataatacaagTAGTGAGACAAGCAGCAGTCccaatgaaaaaattaaagccCAACATAATCACAACGTGAAATCGTGCAATATCAATGAAAATGTATCCAAATGCGTCTGCAATGCCTTCGACCCAAATACATGTTGCTGTCActgtgatgatgatgataactCGTTATCAGCCATCGTCGCGCAATGCAATACTAATGAGACGGAGGGCTCATTTAATTCacatatgcataaaaacaCTTACACCACACCGAGAGTGCCTTCTACTGCTGcatctgcttctgcttctacCAACCCGCCATGCACCAATATCTATGCTCGAATGTTTCCAAATAAAAAACGGCTGCAAAATGAAACCACAGCAGCAGAATTCCAATTTCAATCATCatcctcaacaacaacaggcacACAAGATTTAGAGCCTCAAAAAAGAGTTATATGCGAAACGGAGCAATCATTTTCACAATCGTGCCAATCGAATTTGGTCTACGATAATACGggaaatacaacaacaacggttACAGCAACAACTCccactaaaaatatatttcttcaAAACGTGGAGTACAATCAAGAGCATAAAGATGATTCATCACCGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCACTGCCAAACGATAGTTATCCATCCGTCGTTTGCCGTGACTGCCGAACCAAGCTTGAATCATTTTGGAAGTTTCGCAATATGGCACTAAATTCACATTATGCTTTAAGAGAATTTTTGACATTATCAGAATCTTCTAAACTTAATCAAAGCAATTTGGAAATGAAACTGGAAGCAATTTTAAAGTCTTCATCTGAAGCAATAGCTGCAAAGGCACTGACTGAGCTGAGCAAATCTTCAAAATCAAGATACAGCCAACGGCAACCTACACTTGATggtattttaaaatcaaataaggaCAAGGATCATCAGAGtgttgataataaaattaaagagtTTCAAACGCCTTTAATGTATTCAAATTTGTACGaaatcaaaaatcaacaacCGACTGTCAACACAATTGAAAGAGATGCAATTATGGTTCAAGATAGTTTtgcagcggcggcggcagctgCACCCAAACTTAAAATATCGGATGGGTATATGGAATTGGACAACGGTGTGGAATcgcaaaacacaaaagtttCAGATGTTGAACAATATAAGAAGCAATTAGAGACTGCCGCGGTGCTCATGGACATTAGTAAAAAAATTGTCATATCGCCACCATGCTCGAATCCTCAATCTCCTTGTCTTTCTGCATTTGTAGATACAAATATGAAAAGTTCTGTGATAAAATCAAAACGTCCATCAAATGATAATGATATGCAAGATGGTGTTGAAATCGATCTATCCATCAAGAAGCTGAAAAATGAATATTGCAGTCAACAGAATTTAGTAACAACCACACGTAATATATGCCAACCCCCCATACTTGATATTCATGCAAGTCCTATAAGGACCGACGCTGATTTTAAGAATTATAGTATTACTATTAATGAAGGTGGCCCTTCTAGTTACCAattgaacacaaaaaaactgaATACCGACAGTATTGCTTCGTGTCTATCGGACTCCGAAGACAGCTCCGATTCAAATAAATTAGAAATGGACATCGCGTCTGCTATTTATGACAGAAAGACACCAGAGAGTGTTAGTTCAGATCATGCAACAGATGCTGCTACTACTCAATTATGGCAAGCATTAGCTCGATCGGCCGCTAAAAATAAAGACGAGAGTCGAGCAACGCAACTTTTGCGAAATATGATGAGTCAATCATTTGTATTTCCTGCGCCGTCAACAATAGCATTGACAAAAGTACCTGATGAGCCAATACCACTATTAAAGgaCATGTCAGAATCTCAATCGAACGTTGTTAAAGTATGTCGAAGAAAGCAAAGTTTTCCTACTAAATCTGATTGCGTCGAGGTCCCAGACACTAAGGTGTCCGACACCTTTGTTCGTtcagaaacaaaaaatccaGAAGGAATCAAAGATAAAAAGAGTCTTAAATGTATCAGCAGCACTGCTTTGTCCACTTCTCAAAAGGATATGTCATGCTCTAACTGTGGcactttaacaacaacaatttggaGACGCAGCGCCCGTGGAGAAATGGTTTGTAACGCATGTGGATTATACTTCAAATTGCATGGCGTAAATCGACCCCATTCAATGAGACGTGACACCATCCATACTCGGCGCAGGCGTCCAAAGGAATGCgagaaatcaaaaaaaaGAAACAGGCAATTGGCATGTAATTCGGCGGTAGAATTTGAAACAGATAACATAAATAGCTCCATAGAATGCAAGAAGCCAGATTTGTCCATTAGTTCGGAGCCACCCACTTTTTCAGATTCAGTATTTAACAAATATAAAACGGAAATATCTGAGACAGTGGGAACTGCAGAAACACTCAAAGatgttattttaaaacaagCAAAATCACAATCTTTGCCTGAGTTCAATGAAACCCACGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAaataatgcaaagttaacATACAACGCCAAATAA
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNECDIADLQIYNTSSETSSSPNEKIKAQHNHNVKSCNINENVSKCVCNAFDPNTCCCHCDDDDNSLSAIVAQCNTNETEGSFNSHMHKNTYTTPRVPSTAASASASTNPPCTNIYARMFPNKKRLQNETTAAEFQFQSSSSTTTGTQDLEPQKRVICETEQSFSQSCQSNLVYDNTGNTTTTVTATTPTKNIFLQNVEYNQEHKDDSSPPHITIQIFNCLSIKPLPNDSYPSVVCRDCRTKLESFWKFRNMALNSHYALREFLTLSESSKLNQSNLEMKLEAILKSSSEAIAAKALTELSKSSKSRYSQRQPTLDGILKSNKDKDHQSVDNKIKEFQTPLMYSNLYEIKNQQPTVNTIERDAIMVQDSFAAAAAAAPKLKISDGYMELDNGVESQNTKVSDVEQYKKQLETAAVLMDISKKIVISPPCSNPQSPCLSAFVDTNMKSSVIKSKRPSNDNDMQDGVEIDLSIKKLKNEYCSQQNLVTTTRNICQPPILDIHASPIRTDADFKNYSITINEGGPSSYQLNTKKLNTDSIASCLSDSEDSSDSNKLEMDIASAIYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQLLRNMMSQSFVFPAPSTIALTKVPDEPIPLLKDMSESQSNVVKVCRRKQSFPTKSDCVEVPDTKVSDTFVRSETKNPEGIKDKKSLKCISSTALSTSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACNSAVEFETDNINSSIECKKPDLSISSEPPTFSDSVFNKYKTEISETVGTAETLKDVILKQAKSQSLPEFNETHAGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01325321;
- 90% Identity
- iTF_01321572;
- 80% Identity
- -