Spar000859.1
Basic Information
- Insect
- Scaptomyza parva
- Gene Symbol
- pnr_2
- Assembly
- GCA_035044645.1
- Location
- JAWNNT010000063.1:652224-656247[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9 6.8e+03 -3.3 0.6 18 25 63 70 60 70 0.73 2 3 2.2 3.8e+03 -2.5 0.1 1 6 268 273 264 275 0.65 3 3 9.4e-17 1.6e-13 49.9 3.0 1 35 751 784 751 785 0.98
Sequence Information
- Coding Sequence
- ATGTATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACATTGGTTAACGAGTGCGATATTGCAGATCTACAAATTTATAGCGCAAGTAGTGAGACAAGCAGCAGTCCCCTTGAAAATTATAAAGCCCAACATAATCACAACGTGAACGTGAAATCGTgcaatattaatgaaaatgtatcCAAATGCGTCTGCAATGCCTTCGACCCAAATACATGTTGCTGTCAatgtgttgatgatgatgatgataactCGTTATCAGCCGTCGTCGCGCAATGCAATAATAATGAGACGACGGGTGGCTCATTCAATttacaaatgcataaaaaaaattacaccaCACCGAGTGTGCCTTCTTctgctgctattgctactgctgccaaCCCGCCATGCACCAATATCTATGCTCGAATGTTTCCAAATAAGAAACGGCTACAAACTGAAACGACATCAGCAGAATTACAATTTCAAtcatcatccacatccacatcatcctcaaccacaacaacaacacccacaaAAGATTTAGAGCCTCAAAAAAGAGTTACTATATGCGAATCGGAGCAATCATTTTCACAATCATGCCAATCGAATGTGGTCTACGATAATACGGCAAAtataacaccaacaacaacggcaacagcaacaactcccactaaaaatatatttcttcaaAACGTGGAGTACAATCAAGAGCATAAAGATGATTCATCACCGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTATCCATCCGTCGTTTGCCGTGACTGCCGAACCAAGCTTGAATCATTTTGGAAATTTCGCAATATGGCACTCAATTCACATTATGCATTAAGGGAATTTTTGACATTATCAGAATCGTCTAAACTTAATCAAAACAATTTGGAAATGAAATTGGATGCAATTTTAAAGTCTTCATCGGAAGACATAGCTGCAAAGGCACTGACTGAGCTGAGCAAATCTTCAAACACAAGATATAGCCAACGGCAACCAACACTTGATggtattttaaaatcaaataaggaCAAGGAACGtccgattgttgttgttgataataaCCGGATTAAAGAGTTTCAAACGCCTTTAATCTATTCAAATTTGTACGAACAACAATCGTCTGTCAACACAATTGATCGAGATGCAATTATGGTTCAAGATAGTATTGCAGCGGCTACGGCGGCGGCGACTGCAGTGGCAGCTGCACCCAAACTTAAAATATCGGATAGATTTATGGAATTAGACAATGGTGtggatataaaaacaaatacaaaagtttCAGATGTTGAACAATACAAGAAGCAATTAGAGACTGCCGCGGTGCTAATGGACataagtaaaaaaattgtCATATCGCCACCATGCTCGAATCCCCAATCTCCATGTCTTTCTGCATTTGTCGatacaaatatgaaaagttcTGTGATAAAATCAAAACGTCCATCAAATGATAATGATATGCAAGATGATGTTGAGATCGATCTATCCAtcaaaaagctgaaaaatgaatattgcagtcaacaacaacaacagaatttAGTAGGAATCACACGTAATATATGCCAACCAAGCAACCCAATCCATGATATCCATCAAGCAGGTCCTATAAGGACCGATGCTGATTTTAAGAATTATAGTATTACTATTAATGAAGTTGGCCCCTCTAGTTACCAATTGAACACAAATAAGAAACTTAATACCGACAGTATTGCTTCGTGTCTAACTGACTCCGAAGACAGTTCCGattcaaataaattagaaATGGACATAGCATCGGCTGTCTATGATCGAAAGACACCGGAGAGCGTTAGTTCAGATCATGCAACAGATGCTGCCACCACTCAATTATGGCAAGCATTAGCTCGATCGGCCGCTAAAAATAAAGATGAGAGTCGAGCAACGCAACTTTTGCGAAATATGATGAGTCAATCATTTGTATTACCTGCACAGTCAACCATAGCATTGACAAAAGTACCTGATGAGCCACTACCACTTTTAAAGGACATGTCAGAATCTCAATCGAACGTTGTTAAAGTATGTCGAAGAAAGCAAAGTTTTCCCACTAAATCTGATTGCGTCGAGGCCCCAGACACTAAGGTTTCCGACACCTTTGTTCGTtcagaaacaacaaatccCGAAGGAATCAAAGATAAGAAGaGTCTAAAATGTATTAGCAACACTGCTTTGACCACTTCTCAAAAGGATATGTCATGTTCGAATTGTGGTACCTTAACAACAACCATTTGGAGACGCAGCGCCCGAGGAGAAATGGTTTGTAATGCATGTGGATTATACTTTAAATTGCATGGCGTCAATCGACCACATTCAATGCGACGTGATACCATCCATACTCGGCGCAGGCGTCCAAAGGAATGCGAGAAATCAAAGAAAAGAAATAGGCAATTGGCATGCAATTCGGTTGTAGAATTTGAAACGGATAACATTAATAGCTCCATAGAATGCAAGCCAGAGTTGTCTTTAAGTCAGGAGACTCCCACATTTTCGGATTCAGTATTTAACAAATATAAAACGGAAATATCTGAGACAGTGGGAACTGCAAATACACTCAAAGatgttattttaaaacaaacaaaatcacaatCTTTGCCTGAATTCAATGAAACCCATGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGGTAACATACAACGCCAAATAA
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNECDIADLQIYSASSETSSSPLENYKAQHNHNVNVKSCNINENVSKCVCNAFDPNTCCCQCVDDDDDNSLSAVVAQCNNNETTGGSFNLQMHKKNYTTPSVPSSAAIATAANPPCTNIYARMFPNKKRLQTETTSAELQFQSSSTSTSSSTTTTTPTKDLEPQKRVTICESEQSFSQSCQSNVVYDNTANITPTTTATATTPTKNIFLQNVEYNQEHKDDSSPPHITIQIFNCLSIKPLPNDSYPSVVCRDCRTKLESFWKFRNMALNSHYALREFLTLSESSKLNQNNLEMKLDAILKSSSEDIAAKALTELSKSSNTRYSQRQPTLDGILKSNKDKERPIVVVDNNRIKEFQTPLIYSNLYEQQSSVNTIDRDAIMVQDSIAAATAAATAVAAAPKLKISDRFMELDNGVDIKTNTKVSDVEQYKKQLETAAVLMDISKKIVISPPCSNPQSPCLSAFVDTNMKSSVIKSKRPSNDNDMQDDVEIDLSIKKLKNEYCSQQQQQNLVGITRNICQPSNPIHDIHQAGPIRTDADFKNYSITINEVGPSSYQLNTNKKLNTDSIASCLTDSEDSSDSNKLEMDIASAVYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQLLRNMMSQSFVLPAQSTIALTKVPDEPLPLLKDMSESQSNVVKVCRRKQSFPTKSDCVEAPDTKVSDTFVRSETTNPEGIKDKKSLKCISNTALTTSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACNSVVEFETDNINSSIECKPELSLSQETPTFSDSVFNKYKTEISETVGTANTLKDVILKQTKSQSLPEFNETHAGEELSVPLNLVSSENNAKVTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01325321;
- 90% Identity
- -
- 80% Identity
- -