Scal013951.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- pnr
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010001018.1:14392-18530[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.6 1e+04 -3.9 0.5 20 25 63 68 60 68 0.77 2 3 2.6 3.6e+03 -2.4 0.1 1 6 266 271 262 273 0.65 3 3 1.1e-16 1.5e-13 49.9 3.0 1 35 741 774 741 775 0.98
Sequence Information
- Coding Sequence
- ATGTATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACATTGGTTAACGAGTGCGATATTGCAGATCTACAAATCTATAATACAAGTAGTGAGACAAGCAGCAGTcccaatgaaaaaaataaagcccAACACAATCACAACGTGAAATCGTGCAATATTGATCAAAATGTATCCAAATGCGTCTGCAATGCCTTCGACCCAAATACATGTTGCTGTCAATGcaatgatgatggtgatgataaGTCGTTATCAGCCGTCGTCGCGcaatgcaataataatgaGACGGGGGGCTCATTTAATtcacatatgcataaaaacaattacacCACACCGAGTGTGCcttcttctgctgctactgcttctgcttctgccaACCCGCCATGCACTAATATCTATGCTCGAATGTTTCCAAATAAAAAACGGCTGCAAACTGAAACGACAGCAGCTGAACTACAATTTCAATCATCATCCACTTCATccgcaacaccaacaacagctacacaAGAATTAGAGCCCCAAAAGGGAGTTACTAAATGCGAATCGGAGCAATCATTTTCACAATCGTGCCAATCGAATGTGGTGTACGATAATACggcaagtacaacaacaacagcaacaacggcaaccgcaacagcaacaactcccactaaaaatatatttcttcaAAACGTGGAGTACAATCAAGAGCATAAAGATGATTCATCACCGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTATCCATCCGTCGTTTGCCGTGACTGCCGAACCAAGCTTGAATCATTTTGGAAGTTTCGCAATATGGCACTCAATTCACATTATGCTTTAAGGGAATTTTTGACATTATCAGAATCGTCTAAACTTaATCAAAATAATTTGGAAATGAAATTGGATGAAATTTTAAAGTCTTCATCGGAAGCAATTGCTGCAAAGGCACTGACTGAGCTGAGCAAATCTTCTAAAACAAGATACAGCCAACGGCAACCTACACTTGATggtattttaaaatcaaataaggACAAGGATCGTCAGATTGCTGTTGATAATAGAGTTAAAGAGTTTCAAACGCCTTTAATCTATTCAAATTTGTACGATTTACCAACTCAACAACAATCGACTGTCAACACAATCGAAAGAGATGCAATTATGGTTCAAGATAGTATTgcagcggctgcggctgcggcagctgcaccCAAACTCAAAATATCGGATGGTTATTTGGAAATAAACAACGGTTTggatacaaaaaacacaaaagtttcaGATGTTGAACAATACAAGAAGCAATTAGAGACTGCCGCGGTGCTAATGGACATTAGTAAAAAGATTGTCATATCGCCACCATGCTCGAATCCCCAATCTCCTTGTCTTGCTGCATTTGTCgatacaaatatgaaaagttCTGTGATAAAATCAAAACGTCCATCAAATGATAATGATATGCAAGATGGTGTTGAAATCGATCTATCCAtcaaaaagctgaaaaatgAATATTGCAGTCAACAACAGAATTTAGTCCCAACCACACGTAATATATGCCAACCCCCCATCCATGATATCCATGCAAGTCCTTTAAGGACCGATGCTGATTTTAAGAATTATAGTATTACTATTAATGAAGTTGGCCCCTCTAGTTACCAATTGAACACAAATAAGAAACTAAATACCGACAGTATTGCTCCGTGTCTAACGGACTCGGAAGACAGCTCCGATTCGAATAAATTGGAAATGGACATCGCATCTGCTATCTATGATAGAAAGACACCGGAGAGCGTTAGTTCTGATCATGCAACAGATGCTGCTACCACTCAATTATGGCAAGCATTAGCTCGTTCGGCCGCTAATAAAAAAGATGAGAGTCGAACAACGCAACTTTTACGAAATATGATGAGTCAATCATTCGTATTTCCAGCGCCGTCAACTATAGCATTGACAAAAGTACCTGATGAGCCAATACCACTATTGAaggACATGTCAGAATCTCAATCGAACGTTGTTAAAGTATGTCGAAGAAAGCAAAGTTTTCCAACTAAATCTGATTGCGTCGAGGCCCCAGATACCAAGGTGTCCGACACCTTTGTTCGTtcagaaacaacaaatccaGACGGAATCAAAGATAAAAAGAGTCTAAAATGCATAAGCAGCCCTGCTTTATCCACTTCTCAAAAGGATATGTCATGCTCCAATTGTGgcactttaacaacaacaatttggagACGCAGCGCTCGAGGTGAAATGGTCTGTAATGCATGCGGATTATATTTCAAATTGCATGGCGTCAATCGACCCCATTCAATGAGACGTGATACCATCCATACTCGGCGCAGGCGTCCAAAAGAATGCGAGAAATCAAAGAAAAGAAATAGACAATTAGCATGTAATTCGGCGGTTGAATTTGAAGCGGATAACCTAAATAGTTCGTTGGAATGCAAGAAACCAGATTTGTCCATAAGTCAGGAGACGCCCACTTTTTCAGATTCAGTATTTAACAAATATAAAACGGAAATATCTGAGACAGTGGCAACTGCAGATACACTCAAAGatgttattttaaaacaaacaaaatcacaatCTTTGCCTGAGTTCAATCAAACCCACGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAGTAATGCAAAGTTAACATACAACgccaaataa
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNECDIADLQIYNTSSETSSSPNEKNKAQHNHNVKSCNIDQNVSKCVCNAFDPNTCCCQCNDDGDDKSLSAVVAQCNNNETGGSFNSHMHKNNYTTPSVPSSAATASASANPPCTNIYARMFPNKKRLQTETTAAELQFQSSSTSSATPTTATQELEPQKGVTKCESEQSFSQSCQSNVVYDNTASTTTTATTATATATTPTKNIFLQNVEYNQEHKDDSSPPHITIQIFNCLSIKPLPNDSYPSVVCRDCRTKLESFWKFRNMALNSHYALREFLTLSESSKLNQNNLEMKLDEILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILKSNKDKDRQIAVDNRVKEFQTPLIYSNLYDLPTQQQSTVNTIERDAIMVQDSIAAAAAAAAAPKLKISDGYLEINNGLDTKNTKVSDVEQYKKQLETAAVLMDISKKIVISPPCSNPQSPCLAAFVDTNMKSSVIKSKRPSNDNDMQDGVEIDLSIKKLKNEYCSQQQNLVPTTRNICQPPIHDIHASPLRTDADFKNYSITINEVGPSSYQLNTNKKLNTDSIAPCLTDSEDSSDSNKLEMDIASAIYDRKTPESVSSDHATDAATTQLWQALARSAANKKDESRTTQLLRNMMSQSFVFPAPSTIALTKVPDEPIPLLKDMSESQSNVVKVCRRKQSFPTKSDCVEAPDTKVSDTFVRSETTNPDGIKDKKSLKCISSPALSTSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACNSAVEFEADNLNSSLECKKPDLSISQETPTFSDSVFNKYKTEISETVATADTLKDVILKQTKSQSLPEFNQTHAGEELSVPLNLVSSESNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01325321;
- 90% Identity
- iTF_01321572;
- 80% Identity
- -