Stum001287.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- pnr
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000147.1:2197805-2202058[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3 6.8e+03 -3.2 0.6 18 25 61 68 58 68 0.73 2 2 1.1e-16 1.8e-13 49.8 3.8 1 35 731 764 731 765 0.98
Sequence Information
- Coding Sequence
- atgtATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAACGAGTGCGATATTGCAGATCTACAAATTTATAACACAAGTAGTGAGACAAGCAGCACTcccaataaaaaatataaagccCAACATAATCACAACGTGAAATCGTgcaatattaatgaaaatgtatCCAAATGCGTTTGCAATGCCTTCGACCCAAATACATGTTGCTGTCgatgtgatgatgatgataactCGTTATCAGCCGTCGTCGCGCAATGCAATAATAATGAGACGGGTGGCTCATTCAATTCACATAAGCGTAATAACAATTACACCACACCGAGTGTGccttcttctgctgcttctgcttctgccaACCCGCCATGCACCAATATCTATGCTCGAATGTTTCCAAATAAAAAACGGCTGCAAACTGAAACGACAACAGCAGAGTTACAATTTCAATCATCATCCACATCAtcctcaacaacaactgcaacagccaCACAAGATTTAGAGCCTCAAAAAAGAGTTACTATATGCGAATTTTCACAATCGTGCCAATCGAATGTGGTCTACGATAATACggaaaatacaacaacaacaacaacggcaacagcaacaactcccactaaaaatatatttcttcaAAACGTGGAGTACAATCAAGAGCATAAAGATGATTCATCACCGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTATCCATCCGTGGTTTGCTGTGACTGCCGAGCCAAGCTTGAATCATTTTGGAAATTTCGCAATATGGCACTCAATTCACATTATGCTTTAAGGGAATTTTTGACATTATCAGAATCGTCTAAACTTAATCAAAACAATTTGGAAATGAAACTGGATGAAATTTTAAAGTCTTCATCGGAAGCAATAGCTGCTAAGGCACTGACTGAGCTGAGCAAATCTTCAAAAACAAGATACAGCCAACGGCAACCAACACTTGAtggtattttaaaattaaataaggaCAAGGATCTTCAGATtgttaatgataataaaattaaagagtTTCAAACGCCTTTAATCTATTCAAATTTGTACGAAATCCCAAGTCAACAACAATCGACTGTCAATACAATTGAAAGAGATGCAATTATGGATCAAGATAGTATTGCAGTGGCTACGACGGCAGCTGCACCCAAACTTAAAATGTCGGATAGATTTTTGGAATTAGACAATGGTGTGGaatcaaaaaacacaaaagtttcagATGTTGAACAATACAAGAAGCAATTAGAGACTGCCGCGGTGCTAATGGacataagtaaaaaaattgtcaTATCGCCACCATGCTCGAATCCTCAATCTCCTTGTCTTTCTGCATTTGTCGatacaaatatgaaaagaTCTGTGATAAAATCAAAACGTCCATCAAATGATAATGATTTGCAAGATGGTGTTGAAATCGATCTATCCAtcaaaaagctgaaaaatgAATATTGCAGTCAACAACAGAATTTAGTACCAACCACACGTAATATATGCCAACCCCCAATTCATGATATCCATGCAAGTCCTATAAGGACCGATGCTGATTTTAAGAATTATAGTATTACTATTAATGAAGTTGGCCCCTCTAATTACCAAttgaacacaaataaaaataaactgaataCCGACAGTATTGCTTCATGTCTAACGGAGTCGGAAGACAGTTCCGATTCACATAAATTAGAAATGGACATCGCATCTGCTATCTATGAtagaaaaacaccggagagcGTTAGCTCAGATCATGCAACGGATGCTGCTACAACTCAATTATGGCAAGCATTAGCTCGATCGGCCGctaaaaataaagatgAGAGTCGAGCAACGCAACTTTTGCGAAATATGATGAGTCAATCATTTGTATTTCCTGCACCGCCAACTATAGCATTGACTAAAGTACCTGATGAGCCAATACCACTATTGAAGgACATGTCAGAATCTCAATCGAACGTTGTTAAAGTATGTCGAAGAAAGCAAAGTTTTCCTACTAAATCTGATTGCGTCGAGGTCCCAGACACTAAGGTGTCCGGCACCTTTGTTCGTtcagaaacaacaaataccGAAGGAATTAAAGATAAAAAgAGTCTAAAATGTATTAGCAGCACTGCTTTGTCAACTTCTCAAAAGGATATGTCATGCTCTAATTGTGGCACTCTAACAACAACCATTTGGAGACGCAGCGCCCGAGGGGAAATGGTTTGTAACGCATGCGGATTATACTACAAATTGCATGGCGTCAATCGACCCCATTCAATGAGACGCGATACCATCCATACTCGGCGCAGGCGTCCAAAGGAATGCGAGAAATCGAAGAAAAGAAATAGGCAATTAGCATGCAATTCGGCGGTAGAATTTGAAACAGATAACATAAATAGCTCCATAGATTGCAAGAAGCCAGACTTGTCTATAAATCAGGAGACTCCCACTTTTTCAGATTCAGTATTTAACAAATTTAAAACGGAAATATCTGAGACAGTGGGAATTGCAGATACACTCAAAGatgttattttaaaacaaacaaaatcacaatCTTTGCCTGAGTTCAATGATCAAACTCATGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAACgccaaataa
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNECDIADLQIYNTSSETSSTPNKKYKAQHNHNVKSCNINENVSKCVCNAFDPNTCCCRCDDDDNSLSAVVAQCNNNETGGSFNSHKRNNNYTTPSVPSSAASASANPPCTNIYARMFPNKKRLQTETTTAELQFQSSSTSSSTTTATATQDLEPQKRVTICEFSQSCQSNVVYDNTENTTTTTTATATTPTKNIFLQNVEYNQEHKDDSSPPHITIQIFNCLSIKPLPNDSYPSVVCCDCRAKLESFWKFRNMALNSHYALREFLTLSESSKLNQNNLEMKLDEILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILKLNKDKDLQIVNDNKIKEFQTPLIYSNLYEIPSQQQSTVNTIERDAIMDQDSIAVATTAAAPKLKMSDRFLELDNGVESKNTKVSDVEQYKKQLETAAVLMDISKKIVISPPCSNPQSPCLSAFVDTNMKRSVIKSKRPSNDNDLQDGVEIDLSIKKLKNEYCSQQQNLVPTTRNICQPPIHDIHASPIRTDADFKNYSITINEVGPSNYQLNTNKNKLNTDSIASCLTESEDSSDSHKLEMDIASAIYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQLLRNMMSQSFVFPAPPTIALTKVPDEPIPLLKDMSESQSNVVKVCRRKQSFPTKSDCVEVPDTKVSGTFVRSETTNTEGIKDKKSLKCISSTALSTSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYYKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACNSAVEFETDNINSSIDCKKPDLSINQETPTFSDSVFNKFKTEISETVGIADTLKDVILKQTKSQSLPEFNDQTHAGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01325321;
- 90% Identity
- iTF_01321572;
- 80% Identity
- -