Basic Information

Insect: Scaptomyza caliginosa
Gene Symbol: zfh1
Assembly: GCA_035044725.1
Location: JAWNNR010000989.1:634518-638724[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.7e-05 0.0018 18.5 1.0 1 23 139 161 139 161 0.97

2 15 0.00047 0.031 14.6 0.8 3 23 169 189 167 189 0.91

3 15 9.2e-05 0.006 16.9 0.1 1 23 363 385 363 385 0.98

4 15 0.00032 0.021 15.2 0.9 1 23 391 413 391 413 0.98

5 15 3.5e-05 0.0023 18.2 2.2 1 23 444 467 444 467 0.95

6 15 0.011 0.72 10.3 3.0 1 23 508 530 508 530 0.94

7 15 0.018 1.2 9.7 1.3 1 23 536 559 536 559 0.97

8 15 0.027 1.7 9.1 0.4 3 19 568 584 567 585 0.95

9 15 0.00016 0.01 16.1 5.6 1 23 594 616 594 616 0.97

10 15 0.041 2.7 8.5 1.2 2 23 622 643 621 643 0.96

11 15 9.3e-06 0.00061 20.0 1.0 1 23 652 674 652 674 0.98

12 15 0.0011 0.069 13.5 0.1 3 23 682 702 680 702 0.97

13 15 5.7e-05 0.0037 17.5 0.5 1 23 708 730 708 731 0.95

14 15 0.048 3.1 8.3 0.4 1 23 741 763 741 763 0.97

15 15 0.0016 0.1 13.0 0.4 1 23 1296 1318 1296 1318 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.7e-05	0.0018	18.5	1.0	1	23	139	161	139	161	0.97
2	15	0.00047	0.031	14.6	0.8	3	23	169	189	167	189	0.91
3	15	9.2e-05	0.006	16.9	0.1	1	23	363	385	363	385	0.98
4	15	0.00032	0.021	15.2	0.9	1	23	391	413	391	413	0.98
5	15	3.5e-05	0.0023	18.2	2.2	1	23	444	467	444	467	0.95
6	15	0.011	0.72	10.3	3.0	1	23	508	530	508	530	0.94
7	15	0.018	1.2	9.7	1.3	1	23	536	559	536	559	0.97
8	15	0.027	1.7	9.1	0.4	3	19	568	584	567	585	0.95
9	15	0.00016	0.01	16.1	5.6	1	23	594	616	594	616	0.97
10	15	0.041	2.7	8.5	1.2	2	23	622	643	621	643	0.96
11	15	9.3e-06	0.00061	20.0	1.0	1	23	652	674	652	674	0.98
12	15	0.0011	0.069	13.5	0.1	3	23	682	702	680	702	0.97
13	15	5.7e-05	0.0037	17.5	0.5	1	23	708	730	708	731	0.95
14	15	0.048	3.1	8.3	0.4	1	23	741	763	741	763	0.97
15	15	0.0016	0.1	13.0	0.4	1	23	1296	1318	1296	1318	0.98

Sequence Information

Coding Sequence: ATGAACAACCAGGACTATGGCGGCATCCACTGGATACAGCAGGAAAGCGTCACCGCTGATGACACCGACAGTGAGGTGACTGCAGCCTATTTAGTGAACGGTAATGCCACTGATGAGGATCTCGACCATATGGCAGCCGAAAACCTGATCTTTATGCGCGATGGTCAACTCAGCGAGATCATTGCAGCAAATGAGGCAGGCGGCACTGTGTTGATCACAGACAGCGGCAACGTTGCCTATGCCGAATCCTTTGACGATGATGCCCAGGTTGTCACTGAAGAGATCATTACCGATGACTGGGTGCAGCACCAAGGAGCAGAGCGCGTGGAAATTGCAGCGGAGCAGATAGCTGGCAATGGCAGCTCGCAGGAACTGTTGGATATGCAGCAGAATGAGTATATGGCCATGCGTCCGTATCCTTGTGACTTTTGCAGCCGGCGGTTTCGTAAAAAGGCCAGTCTTAACAATCATATGCTGGCGCATCAGAACGACCGTCCGCATCTATGCAAGCTGTGTGGAGCGCGATTCTCGCGACGTGCCGAGCTTATTCGCCACTTTGAGGCACATGCAGAAGCTCAGGCGGCCGATGAAGaggcagccgctgcagctgccgaAGCTGCTGCAATTAAGTTcgagccacagcagcagcgaccaATCGATGATCATTTCTACGAGCAGGAATGGCCGTTATATCATgaacaggaacaggagcaCGATAATAACCAGGCGCAGCAActggaggagcagcaggaacaggagcaggagcatGAGCCAGAGCAGGAACAGCTAGTTCAACAGGCCAGCTTTGCAACAGTCAGCGCTGTGCCAGCGCCAACAGTCACTCGTGGCCGCATAAGTCGCCTTAAGCTTAAGGAGGAAAGTACCCAATACATTGTGATTGCTGATAAGCAGCAGACGTCCAACGACAACGAATTGCGCCAATATATGAATTGCGAGGAGCTAACTCAACCGATTGCCTCTAACACGACACCAAACGATATAACACACTCAATCCTCGATAGTCAACTAGCTTCGGATGGAGCGCAACAAACCTTACGCTATCCCGTGCTGGACGAAAGTAAACCATTTGTCTGCCAGCAGTGCGGATTGGCATTTGCACGCGAAAAAGCTCTTGTGTCGCACATTAAGAATCATCGCGTGGATTCGCCATTCGAATGCAATCAGTGCCAAGAGATGTTCTGGGATAATTATAGTCTTCAGGAGCATCAGAAGACGCATCAGTTCGAGGAAAGCAATTCGGAATATGATCCCGCATCAGCTGGCGAGGAGAGTGTTAGTGAATCAGAGCCAGATCAGTTATACGGCGACTTCTACTGCAGCGAATGCGGCATCTCCTTTCACCGGCAGGATCTTTTGCGTCGTcatgccaagcagcaacacagtaagcagcaagcaacaggCAGTAATGCGGCAACTGTAACCGATGCAGAAGGTGGCGGCGATGGCGGGGAAGCTAGTGTCGGAGTGGAAGCTGACGCTGAGAATGCCAAAGATGCACCACACTGTTGTCATACGTGCGGAAAATCATTTCCGAGCGTATTAAAATTGCTTGCGCATGCGGAAATTCATAGACGTTTCCCGCCATTCAAATGTGTCCTGTGCGGCGTTAGCTTTTATGAGGAGCAAGCAATCAAGCGGCATTTGCACACACGCCATCCGCACGAGCTGAAGCCAAACTCGTGCGTGTTGTGTGGAAAGGAATGTCGGGATCGTAAGGCTCTGATCAAGCACGCTTGGGATCACTCGCGCGAAAAGTGCCACTCGTGCTCCAAGTGCGGCAAGAACTTTCACAACAAGGCAAGGCTGAAGCGGCACATGGCCTCGCATCGCGATAAGTCGGTGGTGTGTGAGGTGTGCCACGAAGAGTTCCCCGATGGACGCACCTTATCCAATCATCGGCATTCGCATAGCACCACGTCGCCGGGTAAACTGTTTCCCTGTCACGAGtgtggcaaaacttttggATCGCGCAGCTCACAGCAGATTCATGTGCGCATTCATACGGGTGAACGTCCCTATGGCTGTCGTTATTGCTGGAAGGCCTTTGCCGATGGTGGCACACTGCGCAAGCATGAGAGGATTCATACCGGCGAGAAGCCCTATGCCTGCTCTGTTTGTCCGCGTGCCTTCAACCAGCGCGTTGTGCTGCGCGAGCACATACGATCGCATCACTCGGGTCTGGATGCTGCACGTGGCACGTATCATTGCACTGTCTGCTCCGCAGATTTATCCTCATCTAATGACCTTATCCAGCATCTTATTCAACACAGCGATACAAACACGGCGAAACAACGACAACCAATTactGGTCCTCGCAAGTACAAGCGTCGAAGGAAATTGCAACCGCATGAGATTGCACACATGCTCGAACGTGAGGAATATGCCAGTGATATGGAGTATTGCGATTTGGATGTGGAAAATGTCGATGATCTGCTGGATAATGCAgagccagtgccagtgccagttaAAAAGGAGAAGCGTAAGCGCACTGCTGCCAGTAAATCAGTAAACCAGAGCAATGGCACAGGAGCTTCCAACTCAcccaataaatcaaatgtcaaCAGCAATGCGGATCGTTTGTGGGATGAGAAATTCATGCAATCAAATGGTGGCAATCAATTGAATAATGATGATGCCTATAAAAGTATCTTTCACATTGATTCGCTGGTGGTTGTGAATGACACGGCACTGCAGATAGTGGGCTCGGCTAGCGGTGGAGGTGGAGGAAGCGCCACAAAGTCACGGCGTGGCGGTAAACAAAGCCAAACGCAATCCAATGAATCGAGCAAAATAGGAACTGCTACAAAcagtcgcaacagcaacaaaaagagatCTGCtaaggcagctgcaacaacaacaacaacaacaacctcagcagcagcagccggctcAGCTAGTTCTTCTCGTCCTCGCATGATACACACCGAAAAGTCTCGAGTGCCACCGGAAAAGAAGACCCGGGGAAGTCGCAGCTATGTCACGCGTACAAGTACTAACGaacagcagagcagcagcagcagcagcagcctggTCAAGTCAAGCTCGCGTATTGTGGATGACTACGAGATTATATCACCTGCCACACAGCCACCCAATCAAATCAGCTCCAGTCCGCTGCATATCaagcaggagcaggaacaccaacaacaccagcgCGTTCAGCTCATGTATGATGATACACATTTACTTATCGATGCGGGCCTGTTGCGTGACAAAACCTACGAAAAGTTCAATCCGAGCATTGTCAATGATCTGGAGGAGATTTTGCGTAGTCCGCTTAAGCATGATCGCAATGCACGTTTGCGTTTTACCAGCGAATCATCTACGACGCCACAATTTTTGCCCGAGGAAGAGCAGAACCTTATTAAGATTGAGCCAACGTCACCGGATCTACGCGAAATGGTTGAAAGTCAACAGCGTGTGACTGCCACAGGACACACTACTGCCACATCATtgtcatcctcatcgtcatcggcGCGCACCTCATCACGCCACCTGCGACAGCTTACTGCCAACGGATCGGCATCTGGATCAAGTGCACAAGCTGGCACTAaacgcagcggcagcaaacaaTTGTCAAGTGCCAACAGCTCCAAGAAATCCACATCAAAATCTACCATGTCCGGTAGCAATAGTAACagtaatagcaacagcaacagcaacagcaaagccaTTTCGTACCTCAGCAGTTATGGTGTAGACTCGTACAATGTACAATGTGTGGCGGCCAGTGCGAACTCCTCGGATGTCAGTTCGGGTTTCTTTTCCATCTCGGAGGTGGTGTCCGCTGCGGATGCGGCGGATGCGGCCGATGCAGCAGCCAAGGCAGCAGCGGCCAGTAAAACCGAGCGTCGAGCTCGATGCTTTGAGTGTGAGATGTGTTCGTCCAATTTTCCTGATCGCGCCCAGTTGCTGgaacacatgcatatacacatttag
Protein Sequence: MNNQDYGGIHWIQQESVTADDTDSEVTAAYLVNGNATDEDLDHMAAENLIFMRDGQLSEIIAANEAGGTVLITDSGNVAYAESFDDDAQVVTEEIITDDWVQHQGAERVEIAAEQIAGNGSSQELLDMQQNEYMAMRPYPCDFCSRRFRKKASLNNHMLAHQNDRPHLCKLCGARFSRRAELIRHFEAHAEAQAADEEAAAAAAEAAAIKFEPQQQRPIDDHFYEQEWPLYHEQEQEHDNNQAQQLEEQQEQEQEHEPEQEQLVQQASFATVSAVPAPTVTRGRISRLKLKEESTQYIVIADKQQTSNDNELRQYMNCEELTQPIASNTTPNDITHSILDSQLASDGAQQTLRYPVLDESKPFVCQQCGLAFAREKALVSHIKNHRVDSPFECNQCQEMFWDNYSLQEHQKTHQFEESNSEYDPASAGEESVSESEPDQLYGDFYCSECGISFHRQDLLRRHAKQQHSKQQATGSNAATVTDAEGGGDGGEASVGVEADAENAKDAPHCCHTCGKSFPSVLKLLAHAEIHRRFPPFKCVLCGVSFYEEQAIKRHLHTRHPHELKPNSCVLCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVVCEVCHEEFPDGRTLSNHRHSHSTTSPGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAARGTYHCTVCSADLSSSNDLIQHLIQHSDTNTAKQRQPITGPRKYKRRRKLQPHEIAHMLEREEYASDMEYCDLDVENVDDLLDNAEPVPVPVKKEKRKRTAASKSVNQSNGTGASNSPNKSNVNSNADRLWDEKFMQSNGGNQLNNDDAYKSIFHIDSLVVVNDTALQIVGSASGGGGGSATKSRRGGKQSQTQSNESSKIGTATNSRNSNKKRSAKAAATTTTTTTSAAAAGSASSSRPRMIHTEKSRVPPEKKTRGSRSYVTRTSTNEQQSSSSSSSLVKSSSRIVDDYEIISPATQPPNQISSSPLHIKQEQEHQQHQRVQLMYDDTHLLIDAGLLRDKTYEKFNPSIVNDLEEILRSPLKHDRNARLRFTSESSTTPQFLPEEEQNLIKIEPTSPDLREMVESQQRVTATGHTTATSLSSSSSSARTSSRHLRQLTANGSASGSSAQAGTKRSGSKQLSSANSSKKSTSKSTMSGSNSNSNSNSNSNSKAISYLSSYGVDSYNVQCVAASANSSDVSSGFFSISEVVSAADAADAADAAAKAAAASKTERRARCFECEMCSSNFPDRAQLLEHMHIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01325802; iTF_01321328; iTF_01322808; iTF_01328027; iTF_01323525; iTF_01324295; iTF_01327305; iTF_01325066; iTF_01322077; iTF_01326589;
90% Identity: -
80% Identity: -