Scar009191.1
Basic Information
- Insect
- Sarcophaga carnaria
- Gene Symbol
- grn
- Assembly
- GCA_958299815.1
- Location
- OY283150.1:12917876-12980712[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-19 1.1e-15 57.9 4.7 1 35 388 421 388 422 0.98 2 2 1.2e-18 4e-15 56.2 6.3 1 35 448 481 448 482 0.97
Sequence Information
- Coding Sequence
- ATGCCATCTTCACATACATCACCGCAAATGTGTCGGCCTCACTTTCATACGCCCCTGAGTTCATGGCTTACCAGCGATCATAAATCATTTGCACCCGCCAGCCCTTGGGGCAGTCCGTTTGCGTGTCCCCAAGAACCACAAGTCGATCATAAATTGAGTCAGGTGGTGGGTCAAACGCATCAGACAACAACAACCGGCCAGCATTCATTTCCATTCCCGCCCACACCGCCAAAGGATTCAACGCCCGATTCAGTACAAACCGGTCCCTCGGAATATCAgGCTGTGGTAAATGCTTTTATGCATCAGGCTCAAGCTTCAGGTTCCACCTCCCTGCCCGATACTAGCTGTGCTCTTGATATTAAGCCCACCATACAGAATGGCACTACCTCCTCCTCACTAAGCGGCAGTGGCCAGTCGTCAGTGCCCAAACAAAGAGAAGGTACTAatccaacaacaaataataacaataacaataatagtacaacaacaaataataacaatacaaataatCAACATAATCAaacacacaataacaacaacaacaacaacagccaccaACAAACCACATCCAGTGGTGGTGCATCAAGAACGTCAAACACATCCAAtaaccacaataataataataatccctCTGCCGCCAACCAAAATAATCATACCGcccaccacaacaacaacaacaacaataataacctgCTTAATTCAAACAGTGGATCTGCGGGCCTATTCGACGGTACGGCTCAAACGCACTACAGTAATTTGGCTCAGAGTTCGGCAAGCTTAGGGCTTTCGAATGGTAGCGGTCTCGGCAATTCGGGTGCCAATAGTTACGATGGCTCCTATGCCTCATATGCGGCTCATCATCATGCGGCAGCAGCCGCTGGCATGTTTCAAACACCGTCAATGGCAGCGGCGGCTGCTGCtcgccatcatcatcaccaccatcatcatcatcatgggcATCATGGCATGTCCGCTTCGGGTGTGGGTTCAGGGACAGGCGGTATGTCGAGTAGTATTGGTGCTGGCGGTAGTAGCAGTCTATCTGGTGGCGGCAGTCATCTGATGTCAAACAGTTTAAGTGGTAATGGCAGTAATAACGGCTCCAATATTGATGTTAAGCCGGCGCGTACTAAACCTCGGACCAGTGCTGAAGGCCGTGAGTGTGTAAATTGTGGTGCCACTTCAACGCCTTTATGGCGACGTGATGGAACTGGACACTATTTATGCAATGCCTGTGGTTTATATTACAAAATGAATGGACAAAATCGACCACTAATTAAGCCAAAACGAAGACTGACTCTGCAGTCGCTACAAAGTGCCGCCAAAAGAGCGGGGACCTCGTGTGCCAATTGCAAAACCACAACTACAACCCTTTGGCGACGTAATGCCAGCGGTGAACCAGTATGTAATGCCTGTGGTCTCTACTATAAACTGCATAATgtTAACCGACCTCTTACAATGAAAAAAGAAGGCATACAGACGCGTAATCGTAAATTATCATCgaaatcgaaaaagaaaaaaggtttaGGCGGCGGTTGTCTACCCATTGGCGGCCATTTAGGCATGGGTGACTTTAAGCCCTTGGATCCTTCTAAGGGTTTTGGTGGCGGTTTTTCAGCTTCAATGGctcaACATGGCCATCTTTCCAGTGGTTTACATCCAGCTCATGCGCATATGCATGGTGGCTGGTATACGGGCGGCATGGGAGCTTTGGGTGCTTCCAGTGGTTTACAGGGTGGCTTTTCAACTGCCGGTTCATTAAGTGGCGGTGTTGTACCTCATTCTCAGCCTTATCATTTGGGTTTGGGTTCTATGGTAAGTTGTTATCGTTCTCTTATGCAATCCAATCATGAAAATTAA
- Protein Sequence
- MPSSHTSPQMCRPHFHTPLSSWLTSDHKSFAPASPWGSPFACPQEPQVDHKLSQVVGQTHQTTTTGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQASGSTSLPDTSCALDIKPTIQNGTTSSSLSGSGQSSVPKQREGTNPTTNNNNNNNSTTTNNNNTNNQHNQTHNNNNNNNSHQQTTSSGGASRTSNTSNNHNNNNNPSAANQNNHTAHHNNNNNNNNLLNSNSGSAGLFDGTAQTHYSNLAQSSASLGLSNGSGLGNSGANSYDGSYASYAAHHHAAAAAGMFQTPSMAAAAAARHHHHHHHHHHGHHGMSASGVGSGTGGMSSSIGAGGSSSLSGGGSHLMSNSLSGNGSNNGSNIDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMVSCYRSLMQSNHEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313417; iTF_00200417; iTF_01138629; iTF_00901141; iTF_00921762; iTF_01177476; iTF_00045797; iTF_01374631; iTF_00976104; iTF_00260337; iTF_01194929; iTF_00680178; iTF_01259744; iTF_00655755; iTF_00259438; iTF_01238223; iTF_01237319; iTF_00922576; iTF_01377130; iTF_01261555; iTF_01174738;
- 90% Identity
- iTF_01313417;
- 80% Identity
- -