Cvom006626.1
Basic Information
- Insect
- Calliphora vomitoria
- Gene Symbol
- grn
- Assembly
- GCA_942486075.2
- Location
- CALNXM020000137.1:4968468-5043365[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-19 7.4e-16 57.7 4.7 1 35 480 513 480 514 0.98 2 2 6.1e-19 2.6e-15 55.9 6.3 1 35 540 573 540 574 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACTTCAACGGCGGAAGCTGCTGCCCGCAGCTGGTATGATAATCCGCGCCTGGTAGGAGGTGGCTCACCACAAACCAATGGTTTGGGCGCCTCAGCTACCGGTCTGGGTCATCACGGTTTAGGTGGTGGTCTCGGATCGACGGCCGGTGGTAGCACTGGCTTAGGCGGCGGTAGCGGTGCCGGAGCTGGCAGTGGTTTAGGTTTAGATACCAGCGATATGGGAGCATTTTATGCTTTAGAAAGTAATGGTCATCATAGAAGATATTATCCCAGCTATCATCAACACACCTCCCGTATGCCATCCTCACATACATCACCGCAAATGTGTCGGCCTCACTTTCATACGCCCCTGAGTTCATGGCTTACCAGCGAACATAAATCATTTGCACCCGCCAGCCCTTGGGGCAGTCCGTTTGCCTGTCCCCAGGAACCACAGGTCGATCATAAATTGAGTCAGGTGGGTCAATCACATCAGACAACAACGATGGGCCAGCATTCATTTCCATTCCCGCCCACACCGCCAAAGGATTCAACGCCCGACTCAGTACAAACCGGTCCCTCGGAATATCAGGCTGTGGTAAATGCTTTTATGCATCAAGCTCAAGCGACGGGTTCCACCTCCCTGCCCGATACAAGCTGTGCCCTCGACATTAAGCCCACCATACAAAATGGCTCTACCTCCTCCTCACACAATGGCAGTGGCCAGTCCTCTGTGCCCAAACAAAGAGAAGGTACTAATCAAGCGTCAAATAATAATAATAATAACAACAACAACAACAGTAATAACAATAATAGTACAACAAATAGTAATAATACAAATAATCAACATAGTAATCAAACACACAACAGCAACAACAATAGTAATAACCAATCATCGACATCAGGTTCAAGATCCGCCAATAATTCAAATACACAAAATGTCCAATCTGCCGCCAACCAAAATAACAATACCTCCTCCCTACACAACAACTCCAATGCCCTGCTGAATAGCTCAAGTGCGGCGGGCCTTTTCGATGGCAGCGGCCAAGCGCACTACGGCAATCTAAGCCAATCCAGTGGCTTAGGCCTGAGTAATGGCAACACATCCGCCAATAGTTATGATGGCTCTTATGCCTCCTATGCGGCGCATCATCATGCGGCCGCTCAACATCAAGTGGCCGCCGCAGCAGCCGCTGGCATGTTTCAAAGTCCTTCGATGGCAGCGGCGGCTGCTGCCCGACATCATCATCACCATCATCATCATGGTCATCATTCGATGTCGGCATCTAGTGTGGGTTCGTCGGGTGGTATGTCGAGTAGTGTGGGTGGTGGTGGTGGCGGCAGTCACGGCATGTCCGGCAGTTTAAGTGGTAATGGCAGTAATAACGGTTCCAATATTGATGTTAAACCGGCTCGTACTAAACCTCGGACTAGCGCTGAAGGCCGTGAGTGTGTAAATTGTGGTGCCACCTCAACGCCTTTGTGGCGACGTGATGGTACCGGTCACTATTTGTGCAATGCCTGTGGTTTATATTACAAAATGAATGGTCAAAATCGACCACTAATTAAGCCAAAACGAAGACTGACACTGCAGTCGCTACAAAGTGCCGCCAAACGAGCGGGGACCTCGTGTGCCAACTGCAAAACCACAACTACAACCCTTTGGCGGCGTAATGCCAGCGGTGAACCAGTATGTAATGCCTGTGGTCTCTACTATAAATTGCATAATGTTAACCGCCCTCTCACCATGAAGAAGGAAGGCATACAAACCCGTAATCGTAAATTATCATCGAAATCGAAAAAGAAAAAGGGTTTGGGAGGAGGCTGTTTGCCCATGGGCGGCCATTTGGGTATGGGTGATTTCAAGCCCTTGGATCCTTCTAAGGGTTTTGGTGGCGGCTTTTCGGCTTCAATGGCTCAACATGGCCATCTTTCCAGTGGTTTACATCCAGCTCATGCGCATATGCATGGTGGCTGGTATACTGGCGGTATGGGAGCTTTGGGTGCCTCCAGCGGTTTACAGGGTGGCTTTTCAACGGCCGGCTCTTTAGGTGGCGGTGTTGTACCTCATTCTCAGCCTTACCATTTAGGTTTGGGTTCGATGGGTACTTGGCGTACTGACTATACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDNPRLVGGGSPQTNGLGASATGLGHHGLGGGLGSTAGGSTGLGGGSGAGAGSGLGLDTSDMGAFYALESNGHHRRYYPSYHQHTSRMPSSHTSPQMCRPHFHTPLSSWLTSEHKSFAPASPWGSPFACPQEPQVDHKLSQVGQSHQTTTMGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQATGSTSLPDTSCALDIKPTIQNGSTSSSHNGSGQSSVPKQREGTNQASNNNNNNNNNNSNNNNSTTNSNNTNNQHSNQTHNSNNNSNNQSSTSGSRSANNSNTQNVQSAANQNNNTSSLHNNSNALLNSSSAAGLFDGSGQAHYGNLSQSSGLGLSNGNTSANSYDGSYASYAAHHHAAAQHQVAAAAAAGMFQSPSMAAAAAARHHHHHHHHGHHSMSASSVGSSGGMSSSVGGGGGGSHGMSGSLSGNGSNNGSNIDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314331;
- 90% Identity
- iTF_01261555;
- 80% Identity
- -