Preg031155.1
Basic Information
- Insect
- Phormia regina
- Gene Symbol
- grn
- Assembly
- GCA_001735585.1
- Location
- MINJ01166253.1:4947-62807[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1e-19 1.2e-15 57.8 4.7 1 35 374 407 374 408 0.98 2 3 1.8e-18 4.1e-15 56.1 6.3 1 35 434 467 434 468 0.97 3 3 1.5 3.3e+03 -1.2 0.0 25 33 595 603 595 604 0.83
Sequence Information
- Coding Sequence
- ATGGATATGACTTCAACGGCGGAAGCTGCTGCACGCAGCTGGTATGATAATCCGCGCTTAGTTGGTGGTGGCTCACCACAAACCAATGGTTTGGGAGCATCTGCCACCGGTCTAGGTCATCATGGTTTAGGTGGCGGCCTAGGATCAACGGCCAGTGGTAGTACTGGCTTAGGTGGTGGCAGTGGTGCTGGAGCTGGAAGTGGTTTAGGTTTAGATACCAGCGATATGGGAGCCTTTTATGCATTAGAAAGTAATGGTCATCATAGAAGATATTATCCCAGCTATCATCAACACAcctCCCGTATGCCATCTTCACATACATCACCGCAAATGTGTCGGCCTCACTTTCATACGCCCCTGAGTTCATGGCTTACCAGCGAACATAAATCATTTGCACCCGCCAGCCCTTGGGGTAGTCCGTTTGCCTGTCCCCAGGAACCCCAAGTAGATCATAAATTGAGTCAGGTGGGCCAATCACATCAGACAACAACGATGGGCCAACATTCATTTCCCTTCCCGCCCACACCGCCAAAGGATTCAACGCCCGACTCAGTACAAACCGGTCCCTCGGAATATCAGGCTGTGGTAAATGCTTTTATGCATCAAGCTCAAGCGACAGGTTCCACCTCCATTCCCGATACAAGTTGTGCCCTCGACATTAAGCCCACAATACAAAATGGTTCTACCTCCTCCTCACATAATGGCAGTGGCGGCCAATCTTCGGTGCCCAAACAAAGAGAAGGTCTTAGCAATGGTGTTGCTGGCAACACTTCAGCCAATAGTTATGATGGTTCTTATGCCTCTTATGCGGCGCATCATCATGCGGCCGCTCAACATCAAGTAGCCGCTGCAGCAGCTGCTGGTATGTTTCAAAGTCCTTCAATGGCAGCAGCTGCTGCTGCTAgacatcatcatcaccatcatcatcatggtCATCATTCGATGTCGGCTTCTAGTGTGGGTTCATCGGGTGGTATGTCGAGTAGTGTGGGTGGTGGTGGCGGTGGCGGCAGTCATGGCATGTCCGGCAGTTTAAGTGGTAATGGCAGTAATAATGGTTCCAATATTGATGTTAAACCGGCTCGTACAAAACCCCGGACTAGTGCTGAAGGCCGTGAGTGTGTAAATTGTGGTGCCACCTCAACGCCTTTATGGCGACGTGATGGTACCGGTCACTATTTGTGCAATGCCTGtggtttatattacaaaatgaaTGGTCAGAATCGACCACTAATTAAGCCAAAACGAAGACTGACTCTGCAGTCACTACAAAGTGCCGCCAAAAGAGCGGGGACATCGTGTGCCAACTGcaaaaccacaacaacaaccCTTTGGCGGCGTAATGCCAGCGGTGAACCAGTATGTAATGCCTGTGGTCTCTACTATAAATTGCATAATgTTAACCGCCCTCTCACTATGAAAAAGGAAGGCATACAAACCCGTAATcgtaaattatcttcaaaatcgAAAAAGAAAAAGGGTTTAGGTGGTGGCTGTTTACCCATAGGCGGCCATTTGGGTATGGGAGATTTTAAACCCTTAGATCCTTCGAAGGGTTTTGGAGGTGGCTTTTCGGCTTCAATggCTCAACATGGCCATCTTTCCAGTGGTTTACATCCAGCTCATGCGCATATGCATGGTGGCTGGTATACTGGTGGCATGGGAGCTTTGGGTGCTTCCAGTGGTTTACAGGGTGGCTTTTCAACGGCCGGCTCTTTAAGTGGCGGTGTTGTACCTCATTCTCAGCCTTATCATTTAGGTTTGGGTTCTATGTTTGCCATGTCATGTTTAACCTATTGGCGATCAAATACTTATATCTCACCAAACACTTCTAATGATGACAAATTAAAAGACTCTGACTTAATCCGCATGCAACCATTACAAAATAAGAGCCAAGGAGTTGGTGATAAAGGAGAACATGCATAtgatatataa
- Protein Sequence
- MDMTSTAEAAARSWYDNPRLVGGGSPQTNGLGASATGLGHHGLGGGLGSTASGSTGLGGGSGAGAGSGLGLDTSDMGAFYALESNGHHRRYYPSYHQHTSRMPSSHTSPQMCRPHFHTPLSSWLTSEHKSFAPASPWGSPFACPQEPQVDHKLSQVGQSHQTTTMGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQATGSTSIPDTSCALDIKPTIQNGSTSSSHNGSGGQSSVPKQREGLSNGVAGNTSANSYDGSYASYAAHHHAAAQHQVAAAAAAGMFQSPSMAAAAAARHHHHHHHHGHHSMSASSVGSSGGMSSSVGGGGGGGSHGMSGSLSGNGSNNGSNIDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMFAMSCLTYWRSNTYISPNTSNDDKLKDSDLIRMQPLQNKSQGVGDKGEHAYDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314331;
- 90% Identity
- -
- 80% Identity
- -