Pgri001102.1
Basic Information
- Insect
- Pollenia griseotomentosa
- Gene Symbol
- grn
- Assembly
- GCA_963931875.1
- Location
- OZ007560.1:16721637-16781796[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 1.9e-15 58.0 4.7 1 35 372 405 372 406 0.98 2 2 7e-19 6.5e-15 56.2 6.3 1 35 432 465 432 466 0.97
Sequence Information
- Coding Sequence
- ATGTGTCGGCCTCACTTTCATACGCCCCTGAGTTCATGGCTTACCAGCGAACATAAATCATTTGCACCCGCCAGCCCTTGGGGCAGTCCGTTTGCCTGTCCCCAGGAACCACAGGTCGATCATAAATTGAGTCAGGTGGGTCAATCACACCAGACAACAACGATGGGTCAGCATTCATTTCCATTCCCGCCCACACCGCCAAAAGATTCAACGCCCGACTCAGTACAAACCGGTCCCTCGGAATATCAGGCTGTGGTAAATGCTTTCATGCATCAAGCTCAAGCGACAGGTTCCACCTCCCTGCCCGATACAAGTTGTGCTCTCGACATAAAGCCCACCATACAAAATGGCTCTACCTCCTCCTCACACAATGGCAGTGGCGGTCAATCCTCTGTGCCCAAACAAAGAGAAGGTACTAATCAAGCGTCAAATAACAGTAATAACAATAACAGTACAACAAATAGTAATAATACAAATAATCAACATAGTAATCAGACacacaacagcaacaacaacaataatagtAATAACCAATCATCGACATCAGGTTCAAGATcctcgaataattcaaatacaCAAAATGTCCAATCTGCCGCCAACCAAAATAACAATACCTCCTCCTCACtacacaacaacaataacaacgccCTACTGAACAGTACCAGTGCGGCGGGTCTGTTCGATAGTACCGGTCAATCCCACTACGGCAATTTAGGTCAGTCCAGTGGTTTAGGCTTAAGTAATGGTGTTGCTGGCAACACATCTGCCAACAGTTACGATAGCTCTTATGCCTCGTATGCGGCGCATCATCATGCGGCCGCCCAACATCAAGTCGCAGCAGCAGCAGCCGCAGGCATGTTTCAAAGTCCTTCGATGGCAGCGGCAGCTGCTGCAagacatcatcatcatcaccatcaTCATCACAGTCATCATTCGATGTCGGCGTCCAGTGTGGGTTCGTCGGGCGGTATGTCGAGTAGTGTGGGTGGTGGTGGCGGTGGCGGCAGTCATATCATGTCCGGCAGTTTAAGTGGTAATGCCAGCAATAACGGTTCCAATATTGATGTTAAACCGGCTCGTACTAAACCTCGGACAAGTGCTGAAGGACGTGAGTGTGTAAATTGTGGTGCCACCTCAACGCCTCTGTGGCGACGTGATGGTACCGGTCACTATTTGTGCAATGCCTGTGGTTTATATTACAAAATGAATGGTCAAAATCGACCACTAATTAAGCCAAAACGAAGACTGACTCTGCAGTCACTACAAAGTGCCGCTAAAAGAGCGGGGACATCGTGTGCCAACTGcaaaaccacaacaacaacCCTTTGGCGGCGTAATGCCAGCGGTGAACCAGTATGTAATGCCTGTGGTCTCTACTATAAATTGCATAATgtgAACCGCCCTCTAACCATGAAAAAGGAAGGCATACAAACACGTAATCGCAAACTATCATCGAAATCGAAAAAGAAAAAGGGATTAGGAGGAGGCTGTTTACCCATGGGCGGCCATTTAGGCATGGGCGATTTTAAGCCTTTGGATCCCTCAAAGGGATTTGGTGGAGGTTTCTCGGCTTCAATGGctcAACATGGCCATCTTTCCAGTGGTTTACATCCAGCTCATGCGCATATGCATGGTGGCTGGTATACTGGCGGCATGGGAGCTTTGGGTGCTTCCAGTGGTTTACAGGGTGGCTTTTCAACTGCCGGCTCTTTAAGTGGCGGTGTTGTGCCTCATTCTCAGCCTTATCATTTGGGTTTGGGTTCTATGGGTACTTGGCGTACTGACTATACGTGA
- Protein Sequence
- MCRPHFHTPLSSWLTSEHKSFAPASPWGSPFACPQEPQVDHKLSQVGQSHQTTTMGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQATGSTSLPDTSCALDIKPTIQNGSTSSSHNGSGGQSSVPKQREGTNQASNNSNNNNSTTNSNNTNNQHSNQTHNSNNNNNSNNQSSTSGSRSSNNSNTQNVQSAANQNNNTSSSLHNNNNNALLNSTSAAGLFDSTGQSHYGNLGQSSGLGLSNGVAGNTSANSYDSSYASYAAHHHAAAQHQVAAAAAAGMFQSPSMAAAAAARHHHHHHHHHSHHSMSASSVGSSGGMSSSVGGGGGGGSHIMSGSLSGNASNNGSNIDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314331;
- 90% Identity
- iTF_01261555;
- 80% Identity
- -