Prud010676.1
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- grn
- Assembly
- GCA_956483635.1
- Location
- OY101447.1:178166390-178287119[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 1.5e-15 57.9 4.7 1 35 378 411 378 412 0.98 2 2 7.1e-19 5.3e-15 56.2 6.3 1 35 438 471 438 472 0.97
Sequence Information
- Coding Sequence
- ATGTGTCGGCCTCACTTTCATACGCCCCTGAGTTCATGGCTTACCAGCGAACATAAATCATTTGCACCCGCCAGCCCTTGGGGCAGTCCGTTTGCCTGTCCCCAGGAACCACAGGTCGATCATAAATTGAGTCAGGTGGGTCAATCACATCAGACAACAACGATGGGCCAACATTCATTTCCATTCCCGCCCACACCGCCAAAGGATTCAACGCCCGACTCAGTACAAACCGGTCCCTCGGAATATCAGGCTGTGGTAAATGCTTTCATGCATCAAGCTCATGCGACGGGTTCCACCTCCCTGCCCGATACAAGCTGTGCCCTCGACATTAAGCCCACCATACAAAATGGCTCTACCTCCTCCTCTCATAATGGCAGCGGTCAATCGTCTGTGCCTAAACAAAGAGAAGGTACTAATCAAACgtcaaataacaataataataataataataacaataacaacaacagtaaTAACAATAGTAGTACAACAAATAGTAATAATTCAAACAATCAACATAGTAATCAaacacacaacaacaacaatagtaaTAACCAATCATCGTCATCAGGTTCAAGATCCTCCAATAATACAAACTCGCATAATGTCCAATCTGCCGCCaaccaaaataataataataataatacctCCTCCCTACACAATAACACCAATGCCCTGCTGAACAGTTCTAGTGCGGCGGGACTCTTTGATAGTACCGGCCAGTCACACTATGGCAATCTTAGCCAGTCCAGTGGCTTGGGTTTGAGTAATGGTGTTGCGGGCAACACATCGGCAAATGGTTATGATGGTTCATACGCCTCGTATGCGGCGCATCATCATGCTGCGGCTCAACATCAAGTGGCCGCCGCAGCAGCCGCTGGCATGTTTCAAAGTCCATCGATGGCAGCGGCGGCTGCTGCCagacatcatcatcatcaccatcatcatcatggTCATCATGCGATGTCGGCCTCTAGTGTGGGCTCGTCGGGTGGTATGTCGAGTAGTGTGGGTGGTGGTGGCGGCAGTCATGGCATGTCCGGCAGTTTAAGTGGTAATGGCAGCAATAACGGTTCCAATATTGATGTTAAACCGGCGCGTACCAAACCTCGGACTAGTGCTGAAGGCCGTGAGTGTGTTAATTGTGGTGCCACCTCAACGCCTCTATGGCGACGTGATGGTACCGGCCACTATTTGTGCAATGCCTGTGgtttatattacaaaatgaaTGGTCAAAATCGACCACTAATTAAGCCAAAACGAAGACTGACCCTGCAGTCGCTACAAAGTGCCGCCAAAAGAGCGGGGACATCGTGTGCCAACTGTAAAACCACAACTACAACCCTTTGGCGGCGTAATGCCAGCGGTGAACCAGTATGTAATGCCTGCGGTTTATACTATAAATTGCACAATgtTAACCGCCCTCTAACCATGAAAAAGGAAGGCATACAAACTCGTAATCGTAAGTTGTCATCGAAATCGAAAAAGAAAAAGGGCTTAGGAGGAGGCTGTTTACCCATGGGCGGTCATTTAGGTATGGGCGATTTTAAGCCTCTGGATCACTCTAAAGGTTTTGGTGGCGGTTTTTCCGCTTCAATGGCTCAACATGGCCATCTTTCCAGTGGTTTGCATCCAGCTCATGCGCATATGCATGGTGGCTGGTATACTGGCGGTATGGGAGCTTTGGGTGCTTCCAGCGGTTTACAGGGTGGCTTCTCAACTGCCGGCTCTTTAAGTGGCGGTGTTGTACCTCATTCTCAGCCTTATCATTTAGGTTTGGGCTCTATGGGAACTTGGCGTACTGACTATACGTGA
- Protein Sequence
- MCRPHFHTPLSSWLTSEHKSFAPASPWGSPFACPQEPQVDHKLSQVGQSHQTTTMGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAHATGSTSLPDTSCALDIKPTIQNGSTSSSHNGSGQSSVPKQREGTNQTSNNNNNNNNNNNNNSNNNSSTTNSNNSNNQHSNQTHNNNNSNNQSSSSGSRSSNNTNSHNVQSAANQNNNNNNTSSLHNNTNALLNSSSAAGLFDSTGQSHYGNLSQSSGLGLSNGVAGNTSANGYDGSYASYAAHHHAAAQHQVAAAAAAGMFQSPSMAAAAAARHHHHHHHHHGHHAMSASSVGSSGGMSSSVGGGGGSHGMSGSLSGNGSNNGSNIDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDHSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314331;
- 90% Identity
- iTF_01261555;
- 80% Identity
- -