Basic Information

Gene Symbol
grn
Assembly
GCA_963930755.1
Location
OZ005734.1:330788195-330873658[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-19 2.1e-15 57.6 4.7 1 35 499 532 499 533 0.98
2 2 7.6e-19 7.2e-15 55.9 6.3 1 35 559 592 559 593 0.97

Sequence Information

Coding Sequence
ATGGATATGACCTCTACAGCCGAAGCTGCTGCGCGCAGCTGGTATGACAACCCACGTCTGGTGGGCGGCGGTTCGCCACAGACCAATGGTTTGGGCTCCTCTGCCTCGGGTCTGGGTCATCATGGTTTGTCCGCCGGTTTGGGTTCGACAGCCGGCGGCAGCATGGGCTTGGGTGGTAGCGGCGGTGCCGGTTCCACCGGCGGCCTCGGTTTGGACACCTCCGATATGGGCGCCTTTTATGCTTTGGAAAGTAATGGACATCACCGCAGATATTATCCCAGCTATCATCAACATGCATCCCGTATGCCCTCCTCACATACATCACCGCAAATGTGTCGGCCTCACTTTCATACGCCCCTTAGCTCATGGCTTACCAGCGAACATAAATCATTTGCACCCGCCAGTCCATGGGGCAGCCCGTTTGCTTGCCCCCAGGAGCCACAAGTGGATCACAAACTGAGTCAGGTGGGGCAAACGCATCAGACCACAACGACGGGTCAGCATTCATTTCCATTCCCTCCCACACCGCCAAAGGACTCAACGCCCGATTCAGTACAAACCGGTCCATCAGAATATCAGGCTGTCGTGAATGCCTTCATGCATCAAGCCCAGGCGACGGGCAGCAGTTCCCTGCCGGACACCAGTTGTGCTTTGGACATTAAGCCCACCATACAGAATGGCAGCTCCTCCTCGTTACACAATGGCGGTGGAGCGGGTGGCCAATCGTCGGCACCCAAACAGCGTGAAGGTACTACACAAGCCACaaataatagcaacaacaacaacaataatagtaCAACAAATAGCAATACAAACCACAATCAATCACATAATTCCGCGTCCGCATCCTCCTCCTCGGCTTCGGTGTCAAGGTCATCGGCCTCGTCGCACAACACCAATGTCAACTCTGCCACCAGCAATAAtgcaaacaataacaacaacaacagcagcagtaaCAACCACACCACCTCCCATCACTCCCACTCCAGCAGCAGTGCCTCACACAATGCTCTGCTCAATGGCCTCGGTAATACCGGCAGTATTTTCGATGGCTCTGCCCAAGCTTCCTATGGTAATCTAGGCGGTTCCATGGGTCTGAGTAATGGCGGAGCGGGTAATTCAGCGGCCAATAGCTATGATGGCAGTTATGCCTCTTATGCCGCCCATCATCATGCCCAACAACAGGTGGCAGCAGCGGCTGCTGCGGGTATGTTTCAAAGTTCATCCATGGCAGCAGCGGCTGCGGCCCGTCATCATCACCACAGTCATGGCCATGGTCATGTGCATCACCACAGTGGCGGTATGGGTTCGTCGGGAGTGGGTTCGGCGGTGGGTTCCTCATCCAGCAGTATGGGCGGTGGCGGCGGTATTGGTGGCAGTAGTCATGGCATGGCCGGTGCACTGTTGGGCAATGTGAATAGTGCGGGGTCCAGTGGAGGTGGCGATTCAAAGCCGGCGCGCACAAAACCCAGGACTAGTGCTGAAGGCCGTGAGTGCGTAAATTGCGGTGCAACCTCAACGCCACTGTGGCGACGTGATGGTACCGGCCACTATTTGTGCAATGCCTGTGGTTTATACTATAAAATGAATGGCCAAAACCGACCACTAATTAAGCCAAAACGAAGACTGACGCTGCAGTCCTTACAAAGTGCGGCCAAGCGGGCGGGGACCTCATGTGCCAAttgcaaaaccacaacaacaacccTTTGGCGGCGGAATGCAAGCGGTGAACCAGTGTGTAACGCCTGCGGACTCTATTATAAATTGCACAATGTTAACCGCCCTCTCACAATGAAAAAAGAAGGTATCCAGACCCGCAATCGTAAATTGTCTTCAAAATCGAAAAAGAAGAAGGGCCTCGGAGGCGGTTGTATGCCTCTGGGCGGTCATTTGGGTATGGGCGATTTCAAGCCTTTGGATCCCTCGAAAGGTTTCGGAGGCGGTTTCTCAGCGTCAATGGCCCAACATTCCCATCTTTCCAGTGGTCTGCATCCAGCTCATGCGCATATGCATGGCGGCTGGTATACAGGCGGTATGGGAGCCTTGGGTGCTTCCAGTGGTCTGCAAGGTGGCTTCTCGACGGCAGGTTCTCTGGGTGGTGGTGTAGTGCCACACTCACAGCCTTACCATTTGGGTTTGGGATCAATGgGCACTTGGCGTACAGACTACACGTGA
Protein Sequence
MDMTSTAEAAARSWYDNPRLVGGGSPQTNGLGSSASGLGHHGLSAGLGSTAGGSMGLGGSGGAGSTGGLGLDTSDMGAFYALESNGHHRRYYPSYHQHASRMPSSHTSPQMCRPHFHTPLSSWLTSEHKSFAPASPWGSPFACPQEPQVDHKLSQVGQTHQTTTTGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQATGSSSLPDTSCALDIKPTIQNGSSSSLHNGGGAGGQSSAPKQREGTTQATNNSNNNNNNSTTNSNTNHNQSHNSASASSSSASVSRSSASSHNTNVNSATSNNANNNNNNSSSNNHTTSHHSHSSSSASHNALLNGLGNTGSIFDGSAQASYGNLGGSMGLSNGGAGNSAANSYDGSYASYAAHHHAQQQVAAAAAAGMFQSSSMAAAAAARHHHHSHGHGHVHHHSGGMGSSGVGSAVGSSSSSMGGGGGIGGSSHGMAGALLGNVNSAGSSGGGDSKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCMPLGGHLGMGDFKPLDPSKGFGGGFSASMAQHSHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLGSMGTWRTDYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01314331;
90% Identity
iTF_00817077;
80% Identity
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