Pcer036237.1
Basic Information
- Insect
- Polydrusus cervinus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_935413225.1
- Location
- CAKXYS010001175.1:67512-78795[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-111 3e-106 356.4 25.7 1 300 75 364 75 364 0.95 2 2 0.029 1.3e+03 -0.3 3.9 193 232 394 432 365 439 0.47
Sequence Information
- Coding Sequence
- ATGAGTGACAGTGAACCCCATTCGTTAAACTATAGTGTCAACGACGTACAGACAGAAGAACCGAACAACAATATAGTGAAAGTGGACGGAGTAACCGAAAGTGAAACGTCGGATTTTGTCGAcagacacaatttttttaaagcggaGAGGTCGAGGAGTATTGACAGTTATGGGGATGAGAGCGATGTCATTAATAGTTTCATGCAAACTTCCAGCGATGAAGCAGAGGCGCGTTTATGGGCTAAGCGTCAGGCCCGTGCCGAGGCACGGGAGATACGCATGCGCGAACTTGAGCGGATGCAACGCGAGCAGGAGGAAAACGCCGATCGGCAGTTCGACATGCTGGCGGCCGCCGGCGAACCTGTGTCGGGTCCAAGGACGCGCGTCCCGACGACGACAGCGACGAGGCACCGACCGGCCAGTCGAAGAAGCTCGGAGGATTCGCTAGAGGACGGAGGGGGCGGGAATTTAAGGGAGTTAAGGCATGAACTCAAAGAAGTTGAAGACAAATTTCGAAAAGCCATGATAGCCAATGCCCAGCTAGACAATGACAAATCGTCACAAACTTATCAACTTGAACTCCTCAAAGATAGGTTAGAAGAACTAGAAGAAGACCACTCCCAACTGAAAAGAGAGCACAGGGACAAATGTAGGGAACACGATCAATTGAAGAGGTTGTGCCAGCAATTGAAAGATGACCTGGTCGTTTTAAAGAACGACCTCGAAGAGAGAGATAGATTGATAGCGGAAAAAGGGCTGGTGATAGTCAGTGAAGGAGGAGAGGAGGGGGAACCTCCGAAGAAGGCGCTGGTTCAACAGGAAAATGCCAGGTTATTGGAAGAAGTAGGAGATGGTAGCTTAgATGTTCGATTAGCAAGATTCGCGAAAGAAAAGGGGGAGTTGCAGGATCAAATTAGTAGTTTAAAGTTAGAGTTAGAAGAGGAGAGGAGCAGGAGAAGAAAGTCCGGATCGGGTAGTCTGCTGAATGGACCATCATCAGATTATGACCTCGATGACCTACAAAggGAGGCCAGCAAACAATTAGCAGACTACAAGTTCCGAGCGCAGAAAGCGGAGCAAGACGTGGCAACGTTGCAGGCCACCGTTGCCAGATTGGAGAGTCAGGTGATCAGGTACAAGACAGCGTCAGAAGTGTCGGAACAGTCCGAGGAGGCCTTGAAATCGGAAAAGCGGAAGTTGCAGAGAGAAGCAAGAGAAGCCCAAAACCGAGCAGAAGAACTGGAAACATCAAACACCCATTTACTAAAACGCCtggacaaattaaaaaatgccaAGTCGGCGCTTCTCAAGGAGCTCTGA
- Protein Sequence
- MSDSEPHSLNYSVNDVQTEEPNNNIVKVDGVTESETSDFVDRHNFFKAERSRSIDSYGDESDVINSFMQTSSDEAEARLWAKRQARAEAREIRMRELERMQREQEENADRQFDMLAAAGEPVSGPRTRVPTTTATRHRPASRRSSEDSLEDGGGGNLRELRHELKEVEDKFRKAMIANAQLDNDKSSQTYQLELLKDRLEELEEDHSQLKREHRDKCREHDQLKRLCQQLKDDLVVLKNDLEERDRLIAEKGLVIVSEGGEEGEPPKKALVQQENARLLEEVGDGSLDVRLARFAKEKGELQDQISSLKLELEEERSRRRKSGSGSLLNGPSSDYDLDDLQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTASEVSEQSEEALKSEKRKLQREAREAQNRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00444132;
- 90% Identity
- iTF_01240682; iTF_00196226; iTF_01187851; iTF_01243672;
- 80% Identity
- -