Pter051515.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963920685.1
- Location
- OY987328.1:143913950-143932400[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-107 2.9e-102 345.1 23.8 1 300 75 362 75 362 0.94 2 2 0.029 4.6e+03 -0.3 3.9 193 232 392 430 363 437 0.47
Sequence Information
- Coding Sequence
- ATGAGTGACAGTGAACCTCAATCATTGATATATAGTACAAACAACGAACCGTGCGATGAACCAAACAATAATGTTATCAAAGGGGACGGTGTAACCGAAGGAGAAACGTCGGATTTTATCGACagacacaatttttttaaagccGAACGGTCAAGAAGTATCGATAGTCATGGCGATGAAAGCAATGTCATTAATAGTTTCATGCGATCTTCTAACGATGAAGCTGAAGCACGTCTATGGGCCAAACGCCAAGCTCGTGCCGAGGCACGGGAGATACGCATGCGCGAGCTGGAGCGTATGCAGCGCGAACAAGAAGAAAACGCCGATCGACAGTTTGATATGCTGGCGGCAGCGGGTGAACCCGTTACGGGTCCAAGGGGGCGTACCCCGACTGCGAGGCATCGCCCTGCCAGCAGGAGGAGCTCTGAGGATTCGCTGGAAGACGGCGGAGGAGGAGGAAATTTACGAGAGTTAAGGCACGAACTCAAAGATGTCGAGGATAGATTTCGAAAAGCCATGATAGCCAATGCCCAACTAGACAATGACAAATCGTCGCAGACTTATCAACTCGAACTCCTCAAGGATAGGTTAGAGGAGTTAGAAGAAGAACACTCCCAACTGAAAAGGGAACACAGGGACAAGTGTCGGGAGCACGACCAACTGAAGCGGTTATGTCAGCAGTTGAAGGACGACCTCGGGGTTGTGAGGCACGAACTCGAAGAGAGAGATAGGTTGATAACGGAAAAGGGTTTGGTGATGGTTAGCGAGGGAGGGGAAGAAGGGGAACCACCGAAGAAGGCGTTGGTTCAGGCTGAGAACGCTAGGTTGCTAGAAGAAGCAGGAGATGGCAGCTTAGATGTGCGATTAGCAAGATTCGCAAAAGAAAAGGGCGAGCTGCAGGATCAAATTAGTAGTTTAAAATTAGAGTTAGAAGAGGAGAGAAGTAGGCGGAGGAAATCCGGAGCGGGTAGTCTGTTAAATGGACCCTCGTCGGATTATGACCTCGATGACCTACAAAGGGAGGCTAGCAAGCAATTGGCAGACTACAAATTCCGGGCGCAAAAAGCGGAGCAAGACGTGGCAACGTTGCAGGCCACCGTTGCCAGATTGGAAAGTCAGGTGATTAGGTATAAGACGGCGTCCGAGGTGTCTGAACAGTCCGAGGAAGCTCTGAAATCGGAAAAGAGGAAGTTGCAAAGAGAGGCACGAGAAGCTCAAAACCGAGCTGAAGAGCTGGAAACGTCAAACACGCATCTTCTCAAACGATTGGACAAGTTAAAAAATGCCAAGTCTGCCTTACTCAAAGAACTCTGA
- Protein Sequence
- MSDSEPQSLIYSTNNEPCDEPNNNVIKGDGVTEGETSDFIDRHNFFKAERSRSIDSHGDESNVINSFMRSSNDEAEARLWAKRQARAEAREIRMRELERMQREQEENADRQFDMLAAAGEPVTGPRGRTPTARHRPASRRSSEDSLEDGGGGGNLRELRHELKDVEDRFRKAMIANAQLDNDKSSQTYQLELLKDRLEELEEEHSQLKREHRDKCREHDQLKRLCQQLKDDLGVVRHELEERDRLITEKGLVMVSEGGEEGEPPKKALVQAENARLLEEAGDGSLDVRLARFAKEKGELQDQISSLKLELEEERSRRRKSGAGSLLNGPSSDYDLDDLQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTASEVSEQSEEALKSEKRKLQREAREAQNRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00444132;
- 90% Identity
- iTF_01239032;
- 80% Identity
- -