Ppte024508.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_963969555.1
- Location
- OZ018377.1:1438877-1455426[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.074 6.1e+03 -1.6 0.8 20 81 1 60 1 74 0.69 2 3 2.4e-110 2e-105 354.6 23.0 1 300 76 368 76 368 0.95 3 3 0.03 2.5e+03 -0.4 4.0 193 232 398 436 369 443 0.49
Sequence Information
- Coding Sequence
- ATGAGCGAGAGTGAACCACAATCGTTAAACTATAGTGAGAACGACGACGTACAGATAAAAGAACCAAACAACAATATAGTGAAGGTGGACGGAGTGACCGAAAGCGAAACGTCGGATTTTGTCGAtagacacaatttttttaagactgAGAGATCGAGAAGTATTGACAGTTATGGGGATGAGAGCGACGTCATTAATAGTTTCATGCAAACGTCCAGTGATGAAgCAGAGGCGCGTCTATGGGCCAAGCGCCAGGCCCGTGCCGAAGCACGGGAGATACGCATGCGCGAATTGGAACGGATGCAGCGCGAACAGGAAGAAAACGCCGATCGGCAGTTCGATATGTTGGCAGCCGCCGGCGAACCGGTGACCGGTCCAAGGGGACGTGCTCCCCCCACGACGACCGCGACCAGGCATCGACCGGCCAGTCGGAGAAGCTCGGAGGATTCGCTGGAGGACGGCGGGGGAGGGGGTGGGAACTTAAGAGAGTTGAGGCATGAACTCAAAGAGGTCGAGGATAAGTTCAGAAAAGCCATGATAGCCAATGCCCAGCTAGACAATGACAAATCGTCTCAGACTTATCAACTTGAACTGCTCAAGGAtaggtTAGAAGAACTAGAGGAGGACCACTCCCAACTGAAAAGAGAGCACAGGGACAAGTGTCGGGAACACGATCAACTGAAGAGATCATGCCAGCAATTAAAAAATGACTTGATCGCTTTAAAAAACGAACTCGAAGAGAGAGATCGATTGATAGCGGAAAAAGGTCTGGTGATAGTGAGTGAAGGAGGAGAGGAGGGGGAACCTCCGAAGAAGGCGCTAGTTCAACAGGAGAACGCGAGGTTGTTGGAGGAAGTAGGGGATGGCAGCTTAGATGTTCGATTAGCAAGATTCGCGAAAGAGAAAGGCGAGTTGCAGGATCAGATTAGTAGTTTAAAATTAGAGTTAGAGGAGGAGAGAAGCAGGAGAAGGAAGTCCGGAGCGGGTAGTCTGCTAAATGGACCCTCATCAGATTATGACCTCGACGACCTACAAAGGGAGGCTAGCAAACAATTGGCAGACTACAAGTTTCGGGCGCAGAAAGCGGAGCAAGACGTGGCAACGTTGCAGGCAACCGTTGCCAGATTGGAGAGTCAGGTGATCAGGTACAAGACTGCATCAGAGGTGTCGGAACAGTCCGAGGAGGCCTTGAAAGCGGAGAAGCGGAAGTTGCAGAGAGAAGCACGAGAAGCCCAAAACCGAGCTGAAGAACTGGAAACCTCAAATACCCACCTACTGAAACGCCTggacaaattaaaaaatgcaaagtCTGCCCTACTCAAGGAGCTCTGA
- Protein Sequence
- MSESEPQSLNYSENDDVQIKEPNNNIVKVDGVTESETSDFVDRHNFFKTERSRSIDSYGDESDVINSFMQTSSDEAEARLWAKRQARAEAREIRMRELERMQREQEENADRQFDMLAAAGEPVTGPRGRAPPTTTATRHRPASRRSSEDSLEDGGGGGGNLRELRHELKEVEDKFRKAMIANAQLDNDKSSQTYQLELLKDRLEELEEDHSQLKREHRDKCREHDQLKRSCQQLKNDLIALKNELEERDRLIAEKGLVIVSEGGEEGEPPKKALVQQENARLLEEVGDGSLDVRLARFAKEKGELQDQISSLKLELEEERSRRRKSGAGSLLNGPSSDYDLDDLQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTASEVSEQSEEALKAEKRKLQREAREAQNRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00444132;
- 90% Identity
- iTF_01239032;
- 80% Identity
- -