Bpel018024.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963991005.1
- Location
- OZ022558.1:79610605-79619583[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-109 7.7e-105 351.8 23.1 1 300 74 364 74 364 0.93 2 2 0.03 1.4e+03 -0.4 4.0 193 232 394 432 365 439 0.49
Sequence Information
- Coding Sequence
- ATGAGCGATAGCGAACCACAATCTTTAAACGATAGTGCGAACGACGTACAGACGGAAGAACCGAACAATAATATAGTGAAGGTGGACGGTGTGACCGAAAGTGAAACGTCGGATTTTGTCGACAGgcataatttttataaagaacgcTCGAGAAGTATCGACAGTCATGGGGATGAGAGCGACGTTATCAATAGTTTCATGGAAACATCGAGTGATGAAGCGGAGGCGCGTTTATGGGCCAAACGTCAAGCCCGTGCAGAGGCGCGGGAGATACGCATGCGCGAACTGGAGCGCATGCAGCGCGAGCAGGAGGAGAACGCCGATCGACAGTTCGATATGCTGGCGGCGGCCGGCGAACCGGTCTCGGGTCCCAGGGGTCGTACCCCGACGACGACCGCAAGGCACCGACCGGCCAGTCGGAGGAGCTCGGAAGATTCACTGGAAGATGGCGGAGGAGGGGGTGGGAGTTTGAGAGAGTTGAGACATGAACTCAAAGAAGTCGAGGACAAATTTAGGAAAGCCATGATAGCCAATGCGCAGCTGGACAATGATAAATCCTCGCAGACTTATCAACTTGAGCTCCTCAAAGATAGgttagaaGAATTAGAAGAAGAACACTCGCAGCTGAAAAGAGAACACAGGGACAAGTGTAGGGAGCACGATCAACTGAAGAGGTTATGCCAGCAATTGAAAGACGACCTGGTAGTTTCGAAGAACGACCTCGAGGAAAGAGATCGATTGATAGCGGAAAAAGGTCTGGTGATAGTCAGTGAAGGTGGTGAGGAGGGGGAACCTCCGAAGAAGGCGTTGGTGCAAGAGGAGAACGCGAGGTTGCTGGAGGAAGCGGGAGACGGTAGTTTAGATGTACGATTAGCCAGATTCGCAAAGGAAAAAGGCGAGTTGCAAGATCAAATTAGTAGtttaaaattagaattagaggAGGAGAGGAGTAGAAGAAGGAAGTCCGGACCGGGCAGTCTGCTGAATGGACCCTCGTCAGATTATGACCTCGACGACCTACAAAggGAGGCTAGTAAACAATTAGCAGACTACAAGTTCCGGGCGCAGAAGGCGGAGCAAGACGTGGCAACGTTGCAGGCCACCGTTGCCAGATTGGAGAGTCAAGTGATCAGGTACAAGACGGCGTCGGAGGTGTCGGAACAGTCCGAGGAGGCCTTGAAGGCGGAGAAGAGAAAGTTGCAGAGAGAAGCACGAGAAGCCCAAAACCGAGCCGAAGAACTGGAAACATCAAACACACACCTACTCAAACGCCTGGATAAGTTAAAAAATGCCAAGTCGGCTCTCCTGAAGGAGCTCTGA
- Protein Sequence
- MSDSEPQSLNDSANDVQTEEPNNNIVKVDGVTESETSDFVDRHNFYKERSRSIDSHGDESDVINSFMETSSDEAEARLWAKRQARAEAREIRMRELERMQREQEENADRQFDMLAAAGEPVSGPRGRTPTTTARHRPASRRSSEDSLEDGGGGGGSLRELRHELKEVEDKFRKAMIANAQLDNDKSSQTYQLELLKDRLEELEEEHSQLKREHRDKCREHDQLKRLCQQLKDDLVVSKNDLEERDRLIAEKGLVIVSEGGEEGEPPKKALVQEENARLLEEAGDGSLDVRLARFAKEKGELQDQISSLKLELEEERSRRRKSGPGSLLNGPSSDYDLDDLQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTASEVSEQSEEALKAEKRKLQREAREAQNRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00444132;
- 90% Identity
- iTF_01239032;
- 80% Identity
- -