Pman008193.1
Basic Information
- Insect
- Pieris mannii
- Gene Symbol
- zfy1
- Assembly
- GCA_029001895.1
- Location
- CM054834.1:12125047-12129923[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.7 2.3e+02 3.1 0.3 2 23 6 27 5 27 0.95 2 13 0.057 4.9 8.4 2.1 1 19 1019 1037 1019 1039 0.97 3 13 4.9e-05 0.0042 18.1 1.1 2 23 1121 1142 1120 1142 0.97 4 13 1.6e-05 0.0014 19.6 1.1 1 23 1148 1170 1148 1170 0.99 5 13 0.00057 0.049 14.7 3.3 2 23 1177 1198 1176 1199 0.95 6 13 0.22 19 6.6 1.0 6 23 1213 1230 1211 1230 0.97 7 13 0.00018 0.015 16.3 0.5 3 23 1237 1258 1236 1258 0.97 8 13 0.0055 0.46 11.6 0.5 2 23 1274 1294 1273 1294 0.96 9 13 6.6e-05 0.0056 17.7 0.5 1 20 1300 1319 1300 1322 0.92 10 13 0.0033 0.28 12.3 0.3 1 23 1330 1352 1330 1352 0.97 11 13 0.001 0.085 13.9 7.3 1 23 1358 1380 1358 1380 0.98 12 13 1.6e-06 0.00014 22.7 0.8 1 23 1386 1410 1386 1410 0.95 13 13 0.0021 0.17 13.0 4.4 1 23 1416 1438 1416 1439 0.95
Sequence Information
- Coding Sequence
- ATGGATGAGAAAGTTCAGTGTCCAGTTTGTACTCTTTATCTTCACAATGGGATGTCGTTAGAGACTCATTTGGATACACATCCTAAAGATCAAGTTATTAAAGCTTTATGTTGTTTATCTTCTAAAGGCAATGCAAGTGGCAGTAGAACTCCCACACCATCAATTTCTGAACGTTCTTATAGAAGTAGGACCCCGGTGACAGATGATAGTGTTAGATGGTCATCATCACGCCGCAGTGCTGAAAGCACTTATTGGAGAAGGACACCTAGCAGAAATAAATCATTGTCATCATGTAATTCTAGAAATGCCACTCCAGAAGCCAGACTGAATGTTACCAACTTTGACAGCAATGCTGTCAACAATTGTTCTGAATTTTCAAATTGTTCAGTGAAATCTTCTAAAACATCACAGTCATATCTGCCAAGTGTGCCAACAATACAATCAAACTATAGCCAGCAATATCCATTCTACAGTGAGCCTACAGAAGACCCAGAAATAAAGTATTCTCGTAGCTCTGATTACAATGTGGCTGAAAATTCAAATCAGTTGTTTGTTTATAATGTTCCAGTACTAACATCAAATGTAAAAGTTTCAACTTCTCCTACATTACCAACACCTTCAACATCTAAAAAACAgagtaattatgtaaaaattcttccaaaacaaaacatgGTTTTAAAAAATGCTGCTAGGTTAGGATACATTGCTCCAGGGCTCAAGCCATATCCTGTTATGATGTCCACATCTCCAACTTATATGCAAAAAAATGTTCAAACTAATATGATGGTTGCGGGAAGTGTACCTGTGTCTGGAATATTAGATACTAAAACAGCTGTGGCTCCATTAGCAAGTCAGTTTACTCAACTTAATTCAGGCAACTTAACAACTGGGACAACTGTGGTCACTCAAAATTCACAAATTATTTATCGGGAGATGGTGCATAGTATAGATGGAAAAccttatatttcaaatatacctCATGTTCTTAATACACATGAAAATATGGGGCAGAGTGGCTCATTGTATCAAAATCTTATGGTGGTTGACCCCTTCGGTAACACTTCATGTATGTATAGTTCGCCTCAATCTATTTTACCCAAGCCTTGTAACTCTCCAATATTCAGCAATAATTTATCACATATACCAACATCAATTGACAAGTCAATaccaaatattgtaaatgatGTTAGTAAAACACTGATAATGGAGGTTAGCCCAATGCAGCATCAAATGTCATCTAAAACTGAGGTGATGGCGATGCAACAAGTAGAGGAGACCAGGCTTGGTAACTGTGCTCAAGGACAGACAGAAAGTGATACTGTACATAGATCATTAGAACCAGAGTCTGAGTCTAAAAGTTCAACATCTGTTTCCACAAAGGGACTAAAAATTCTGAGTAATATTAAAGTGGAAGTTCCTGTACAGCACAATAAGAACATGATTAATACTATTATGGACCTTACCGGTCCAGGAGACTCTGGGTACATTCAATGTCCTCAATCACCTGAGAATATTCTACCAGATTTAAAGGAGAAACCTCAGAGTAGATCAGATATTGCCAATCACTGTGAGCCATCTAGTGAgagtaatgaaaaatatacacCTCATAACTtttcagttataaaaaatgttggcAATCCGCAGTCCTGTAAAGACTTTCCTAAGTTAAATAGTGCACAGGAGGACAATGAATCATGCGATAGCAATCCAGTTCCTGACCTTATATGTAACGAAAAGCCCTCAATATCACCCTGCAGTGACTTATCAGAAAACTCCATGGACCAGTGTTCACCACTCTCAAAGCATGACCATTCTCCTGAATCCAAACAAGAAATAATTTCTGGCAATGATCAGAGATTAAAAACTGAGATGGTAGCAATTAAGGCACATGCAGAGAGAGATGATTCTAATACTTCTAAATCTACAGCAACATTTCCAGTTGTCCAAGCCTTGACAAACATAGTTGTTGAAAATGATGATTTTCATTCTAAACAAAAGAGCCATCCCCTGAgactaaacaatatatttgtcaaaaaacataaaaagctaactataaaaaattttaagccATCAAAATTTGATTCAGACCCACGACCTTCGTCATCCACAAGTAAATCTGAACAATACTTCAATCTGAATATTGAGAAGGTAGAAAATCACGAGGATGGAATTCAGTCTGAAACTTCTGTTCAAAAAATTGAAGTCTTAGAAAATGAGAAAGAATTTGATGCTGACACAGAAGAGCAATCAATGGATATTGAGCCGACTGCGCCTTCAATGATAAGTCACTCCAATGGATATTCAACCTCCATTGACTTGGTAATCAAGGAGGAAGTGAATTCCAACAATGAGTTCAGCAACGAAGCCGATAAGTCCGGACGTGACGTCGCCAACCTCGAGTCTTTACGTCCGATCAATGTGATTACTTATGGCAATATGGGTGCCGCAGATTTTGACGACGATTCCAACCATAGAGAGCTTCTGGACTTAGAGACGGCTTCTAAAAACAAGCAATTTGTCAACATGATGAATGATAACTATTTCGGTGATAATATTTACGCTGATTATTTTACACCTGATCGCGTCGAGAGTTTCGATTCAGAGAAAGGATCGAATGTGGGTAAAGATAGggaagtttataatatttggggAGAACCATCGCAAAAGGAGAACGAGTTTGTCTTACCTAATTTTATTCACGAAAGCTACAAAATTGCCGAGAGCAATATGGATTATGATATTGGggaaaatcaaaatataaatcacaTGGGACACGCAGAACGGGATAGTAAAGCTGACGTTTTACAAGAGACTAGGGAAGAGGACCCGCCGCTGAATATTTGTGCAGACGAGCGGATGCCCCCCCGAGGGGAGCTCAGCGGACAAGAGAGCAATGGCGATATGGAGTCATCATGGAGCGGGATGTACCCGGAGGTGACGGCCGCGGAGCCTTACGACCTGATGGCTCGCGAGAGTTGGGTCTCCGACGGTTCGGACGTCGACGACAACCACAAGACGGAAAATTTAGAGGAACCGTTGACGAAAGGGCGCCTCCACACATGCGCCCAGTGCGGCCTCAAGTTCCCGACGCTAAAGGAATTGCGATCCCATTGCAACGCCTCCTACTCCCACAGCCGCATCGCCCGCTGCATCAAGAGAGAGGAAAAACCGGACGTGCCTTCGTTAGCTGACGCGGTGGCCACCTCCATCCTGCCCGAATTCGATCCGCTGGCCGAAACCAAGACGGAGCTGATCCTGATAAAGCAGAAGAAGAAGCGGAACAACTTCGTGTGCTTCACGTGCAACGTGGACCAGGGCGGCCCCGAGGCCTTCAACGAGCACCTCAAGGTTCACCCGCTGGAGTGCTACACGTGCGGCAAGTTCTTCTACCGGCGAGCCAACCTGGTGTTGCACACGAAGACGCACCTCGGCATCAAAAATTACAAGTGCGAGGTGTGCGGTAAGCGCTTCGTGACGCGGCAGAAGCTGGGCGAGCACCGCAACACGCACACCGGGCAGGCGCCCGTCAAGTGCACGCTGTGCGACCAGACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGGGACCGACACCACCTGAAGAAGAAGGCCAAGGTGCGCGACTTCGTGTGCCGCTGCGGCGCCGTGTTCCACTCGCGGGCTAAGCTGCTGTGGCATCAGGAGACGCACGAGGAGCGGCCCAAGGCCTGCCCGTACTGCGGAGACAAGTTCGTGCACGCGGCGTCGCTCACGCGCCACGTGCGGCGCTCGCACAACCACCTGTACGTGGCGAGGCGCTCGGGCCGCGACGAGAACGTGCCGTGCCCCGTGTGCAAGCAGGTCTACCTACGCTCCAACCTGCGCGCCCACCTGCACACGCACAGCGGTAAGCGGCCCTTCGTGTGCGTCATGTGCGACAAGGCCTTCACCACCAAGTGGAACCTGAAGCTCCACCGCTGGACGCACGCCAGCCGCTCGGCCAAGCCCTACAAGTGCACTCTGTGCAAGGGCGCCTTCTTCCGCCAGAGCGAGTACGCGGCGCACGTGAACGCGCATCGCTCGGTGCGGCCCTACACGTGCAAGCACTGCGGCCGCCAGTTCATCCGCAAGTACAACTGCCAGCGGCACGTGCGCGAGCACGAGACGGCCAAGCGCTACGCCTGCGAGGTGCCCGATTGCGGGAAGACCTTCCACCGCAGCTACTACCTCACGGAGCACATGCGCGTGCACAGCGGCGCCCGCCCCTTCGCCTGCAACGTCTGCGGCAAGACCTCCACCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACGCGCGAGAGCCCATCGCCACCGAGGCCTAG
- Protein Sequence
- MDEKVQCPVCTLYLHNGMSLETHLDTHPKDQVIKALCCLSSKGNASGSRTPTPSISERSYRSRTPVTDDSVRWSSSRRSAESTYWRRTPSRNKSLSSCNSRNATPEARLNVTNFDSNAVNNCSEFSNCSVKSSKTSQSYLPSVPTIQSNYSQQYPFYSEPTEDPEIKYSRSSDYNVAENSNQLFVYNVPVLTSNVKVSTSPTLPTPSTSKKQSNYVKILPKQNMVLKNAARLGYIAPGLKPYPVMMSTSPTYMQKNVQTNMMVAGSVPVSGILDTKTAVAPLASQFTQLNSGNLTTGTTVVTQNSQIIYREMVHSIDGKPYISNIPHVLNTHENMGQSGSLYQNLMVVDPFGNTSCMYSSPQSILPKPCNSPIFSNNLSHIPTSIDKSIPNIVNDVSKTLIMEVSPMQHQMSSKTEVMAMQQVEETRLGNCAQGQTESDTVHRSLEPESESKSSTSVSTKGLKILSNIKVEVPVQHNKNMINTIMDLTGPGDSGYIQCPQSPENILPDLKEKPQSRSDIANHCEPSSESNEKYTPHNFSVIKNVGNPQSCKDFPKLNSAQEDNESCDSNPVPDLICNEKPSISPCSDLSENSMDQCSPLSKHDHSPESKQEIISGNDQRLKTEMVAIKAHAERDDSNTSKSTATFPVVQALTNIVVENDDFHSKQKSHPLRLNNIFVKKHKKLTIKNFKPSKFDSDPRPSSSTSKSEQYFNLNIEKVENHEDGIQSETSVQKIEVLENEKEFDADTEEQSMDIEPTAPSMISHSNGYSTSIDLVIKEEVNSNNEFSNEADKSGRDVANLESLRPINVITYGNMGAADFDDDSNHRELLDLETASKNKQFVNMMNDNYFGDNIYADYFTPDRVESFDSEKGSNVGKDREVYNIWGEPSQKENEFVLPNFIHESYKIAESNMDYDIGENQNINHMGHAERDSKADVLQETREEDPPLNICADERMPPRGELSGQESNGDMESSWSGMYPEVTAAEPYDLMARESWVSDGSDVDDNHKTENLEEPLTKGRLHTCAQCGLKFPTLKELRSHCNASYSHSRIARCIKREEKPDVPSLADAVATSILPEFDPLAETKTELILIKQKKKRNNFVCFTCNVDQGGPEAFNEHLKVHPLECYTCGKFFYRRANLVLHTKTHLGIKNYKCEVCGKRFVTRQKLGEHRNTHTGQAPVKCTLCDQTFRRYSNMVQHRDRHHLKKKAKVRDFVCRCGAVFHSRAKLLWHQETHEERPKACPYCGDKFVHAASLTRHVRRSHNHLYVARRSGRDENVPCPVCKQVYLRSNLRAHLHTHSGKRPFVCVMCDKAFTTKWNLKLHRWTHASRSAKPYKCTLCKGAFFRQSEYAAHVNAHRSVRPYTCKHCGRQFIRKYNCQRHVREHETAKRYACEVPDCGKTFHRSYYLTEHMRVHSGARPFACNVCGKTSTNKSNHNKHVKIHHAREPIATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205140; iTF_01206782; iTF_01203459; iTF_01202673; iTF_01205940; iTF_00879103;
- 90% Identity
- iTF_01205140;
- 80% Identity
- -