Pmel015138.2
Basic Information
- Insect
- Pieris melete
- Gene Symbol
- zfy1
- Assembly
- GCA_963693345.1
- Location
- CAVNZK010000107.1:168049-177640[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.5 2.5e+02 3.1 0.3 2 23 10 31 9 31 0.95 2 13 0.053 5.3 8.4 2.1 1 19 1023 1041 1023 1043 0.97 3 13 4.6e-05 0.0046 18.1 1.1 2 23 1133 1154 1132 1154 0.97 4 13 1.5e-05 0.0015 19.6 1.1 1 23 1160 1182 1160 1182 0.99 5 13 0.00053 0.053 14.7 3.3 2 23 1189 1210 1188 1211 0.95 6 13 3.7 3.7e+02 2.6 1.3 6 23 1225 1242 1223 1242 0.95 7 13 0.00017 0.017 16.3 0.5 3 23 1249 1270 1248 1270 0.97 8 13 0.0051 0.51 11.6 0.5 2 23 1286 1306 1285 1306 0.96 9 13 0.00028 0.028 15.6 0.7 1 20 1312 1331 1312 1334 0.91 10 13 0.0031 0.31 12.3 0.3 1 23 1342 1364 1342 1364 0.97 11 13 0.00093 0.093 13.9 7.3 1 23 1370 1392 1370 1392 0.98 12 13 1.5e-06 0.00015 22.7 0.8 1 23 1398 1422 1398 1422 0.95 13 13 0.0011 0.11 13.7 4.4 1 23 1428 1450 1428 1451 0.95
Sequence Information
- Coding Sequence
- atggAGGACAAGATGGATGAGAAAGTTCAGTGTCCAGTTTGTACACTTTATCTTCACAATGGGATGTCGTTAGAGACTCATTTGGATACACATCCTAAAGATCAagttattaaagctttatgtTGTTTATCTTCCAAAGGCAATGCAAGTGGTAGTAGGACGCCCACACCATCAATTTCTGAACATTCTTATAGAAGTAGGACACCGGTGACAGATGATAGTGTTAGATGGTCAACATCACGCCGCAGTGCTGAAAGCACTTATTGGAGAAGAACACCTAGCAGAAATAAGTCATTGTCATCATGTAATTCTAGAAATGACACTCCAGAAGCTAGAATGAATGTTACCAACTTTGACAGCAATGCTGTTAACCCTTGTTCTGAATTTTCAAATTGTTCCGTGAAATCTTCTAAGACATCCCAGTCATATCTGCCAAGTGTGCCAACAATACAATCAAACTATAGTCAGCAATATCCATTCTACAGTGAGCCAACTGAAGACCCAGAAATAAAGTTTTCTCGCAGCTCTGATTACAATGTGGCTGAAAATCCAAATCAGCTGTTTGTTTATAACGTTCCAGTACTAACATCAAATGTAAAAGTTTCCACTTCTCCTACATTACCAATACCTTCAACATCTAAAAAACAGAGTGATTATGTAAAAATTCTTCCAAAACAAAACATGGTCTTAAAAAATGCTGCTAGGCTTGGTTACATTGCTCCAGGGATCAAGCCATATCCTGTTATGATGTCCACATCGCCAACTTATATGCAAAAAAATGTTCAAGCTAATATGATGGTTACGGGAAGTGGGCCTGTGTCTGGAATATTAGATACTAAAACAGCTGTGGCTCCATTAGCAAGTCAGTTCACTCAACTTAATTCAGGCAATTTAACAACTGGGACAACTGTGGTCACTCAAAattcacaaattatttatcgGGAGATGGTGCATAGTATTGATGGAAAACCTTATATCTCAAATATACCGCATGTTCTTAATACACATGAAAATATGGGGCAGAGTGGCTCGTTGTATCAAAACCTTATGGTGGTTGACCCCTTCGGTAACACTTCATGTATTTATAGTACGCCTCAATCTATTTTACCCAAGACTTGTAACTCTCCAATATTCAGCAATAGTTTGTCACATATACCAACATCTATTGACAAGTCTATACCTAATATTGTAAATGATGTTAGTAAAACATTGATAATGGAGGTCAGCCCAATTCAGCATCAAATGTCATCTAAAACTGAGGTAATGGCTATGCAACAAGTGGAGGAGACCATGGTTAGTAACTGTACTCCAGGACAGACAGAAAGTGATACTGTACATAGAGCATTAGAACCAGAGTCTGATTCTAAAAATTCAACATCCGTTTCTACAAAGGGACTAAAAATTCTGAGCAATATTAAGGTGGAAGTTCCTGTACAGCACAATAAGAACATGATCAATACTATAATGGACCTAACTGGTCCAGGAGACTCTGGTTACATTCAATGTCCCCGATCACCTGAGAATATTCTCCCAGATTTAAAGGAGAAACCTCAGCGTACATCAGATATTGATAATCGCTGTCAGCCCTCTAATGACAGTAATGTAAAATTGACACCGCATAACTTTtcagttataaaaaatgttggcAACCCACAGTCCTGTAAAGACTTTTCTAAGTTAAATAGTGCTCAGGAGGACAATGAATCATGCGATAGCAATCCAGTTCCTGACCTTATATGTAACGAAAAGCCATCAATATCACCATGCAGTGACTTATTAGAAAACTCCTTGGACCAGTGTTCACAACCCTCAAAACATGACCATTCTCCCGAAtccaaaaaagaaatattttctagTGATCAGAGATTAAAAATGGAGGTGGCAGCAAATCAGGCACATTCGGAAACAGATGATTCAAAAACTTCTAAATCCTTAGCAACACTTCCAGTTGTCCAATCCTTGACAAACATACTTGTTGAAAATGATGATTTTCTTTCTAAACAAAAGAGCCATCCCCtaagattaaataatatatttgtcaaaaaacataaaaagctaacaataaaaaattttaagCCATTAAGATTTGATTCAGACCCACAACCTTCGTCATCCGCAAGTAAATCTGAACAAtactttaatttgaatattgagAAGGTAGAAAAGGATCATGAGGATGGAATTCAGCCTGAAACTTCTGTTCAGAAAATTGAAGTCTTAGAAAATGAGAAAGAATTCGATGCTGATACAGAAGAGCAATCAATGGATATTGAGCCGACTGCGCCATCAATGATCAGTCACTCCAATGGCTATTCAACCTCCATTGACTTGGTAATCAAGGAGGAAGTGAATTCCAACAATGAGTTCAGCAACGAAGCCGATAGGTCCGGACGTGACCTAGCCACCCTCGAGTCTTTACGTCCGATCAATGTGATCACTTATGGCAATATGGGTGCAGCAGATTTCGACGACGATTCCAACCACAGAGAGCTTCTGGACTTAGAGACGGCTTCTAAAAACAAGCAATTTGTCAATATGATGAATGATAACTATTTCGGTGATAATATTTACGCTGATTATTTTACACCTGATCGCGTAGAGAGTTTCGATTCAGAGAAAGGATCCAATGTGGGTAAGGATAGGGAAGTGTATAATATTTGGGGAGAGCCGTCACAAAAGGAGAACGAGTTTGTCTTACCAAATTTTATTCACGAAAGTTATAAAATTGCTGAAAGTAATATGGAATATGACATTGgggaaaatcaaaatatagatCACATAGGACACGCAGAACGGGATAGTAAAGCTGACGTTTTACAAGAGACGAGGGAAGAGGAACCGCCGCTGAATATTTGCGCAGACGAGCGGATGCCCCCCCGAGGGGAACTCAGCGGACAAGAGAGCAATGGCGACATGGAGTCATCGTGGAGCGGGATGTACCCGGAGGTGACGGCCGCGGAGCCTTACGACCTGATGGCTCGCGAGAGTTGGGTCTCCGACGGTTCGGACGTCGACGACAACCACAAGACGGAAAACTTAGAGGAACCGTCGACGAAAGGGCGACTCCACACGTGCGCCCAGTGCGGCCTCAAGTTCCCGACGCTCAAGGAGTTGCGATCTCATTGCAACGCCTCCTACTCCCACAGCCGCATCGCCCGCTGCATTAAGAGAGAGGAAAAACCCGACGTGCCTTCGTTAGCCGAAACTCTCATATTCGAAACCAAAGACGCGGTGGCCACCTCCATCATGCCGGAATTCGATCCGCTGGCCGAGACCAAGCCGGAGCTGATCCTGATAAAGCAGAAGAAGAAACGGAACAACTTCGTGTGTATCACCTGCAACGTGGACCAGGGCGGGCCCGACGCCTTCAACGAGCACCTCAAGGTCCACCCGCTAGAGTGCTACACGTGCGGCAAGTTCTTCTACCGGCGAGCCAACCTGGTGTTGCACACGAAGACGCACCTCGGAATCAAAAATTACAAGTGCGAGGTGTGCGGCAAGCGCTTCGTGACGCGGCAGAAGCTGGGCGAGCACCGCAACACGCACACGGGGCAGGCGCCCGTCAAGTGCACGCTGTGCGACCAGACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGGGACCGACACCACTTGAAGAAGAAGGCCAAGGTGCGCGACTTCGTGTGCCGCTGCGGCGCCTTGTTCCACTCGCGGGCCAAGCTGCTGTGGCACCAGGAGACGCACGAGGAGAAGCCCAAGGCCTGCCCGTACTGCGGAGACAAGTTCGTGCACGCGGCGTCGCTCACGCGCCACGTGCGGCGCTCGCACAACCACCTGTACGTGGCGAGGCGCTCGGGCCGCGACGAGAACGTGCCGTGCCCCGTGTGCAAGCAGGTGTACCTGCGCTCCAACCTGCGCGCGCACCTGCACACGCACAGCGGCAAGCGGCCCTTCGTCTGCGTCAGTTGCGACAAGGCCTTCACCACCAAGTGGAACCTGAAGCTGCACCGCTGGACGCACGCCAGCCGCTCGTCCAAACCCTACAAGTGCACGCTGTGCAAGGGCGCCTTCTTCCGCCAGAGCGAGTACGCGGCGCACGTGAACGCGCATCGCTCGGTGCGGCCATACACGTGCAAGCACTGCGGCCGCCAGTTCATCCGCAAGTACAACTGCCAGCGGCACGTGCGCGAGCACGAGACGGCCAAGCGCTACGCCTGCGAGGTGCCCGACTGCGGCAAGACCTTCCACCGCAGCTACTACCTCACGGAGCACATGCGCGTGCACAGCGGCGCCCGCCCCTTCGCCTGTAACATCTGCGGCAAGACTTCCACCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACTCGCGAGAGCCCTACGCCAGCGAGGCCTAG
- Protein Sequence
- MEDKMDEKVQCPVCTLYLHNGMSLETHLDTHPKDQVIKALCCLSSKGNASGSRTPTPSISEHSYRSRTPVTDDSVRWSTSRRSAESTYWRRTPSRNKSLSSCNSRNDTPEARMNVTNFDSNAVNPCSEFSNCSVKSSKTSQSYLPSVPTIQSNYSQQYPFYSEPTEDPEIKFSRSSDYNVAENPNQLFVYNVPVLTSNVKVSTSPTLPIPSTSKKQSDYVKILPKQNMVLKNAARLGYIAPGIKPYPVMMSTSPTYMQKNVQANMMVTGSGPVSGILDTKTAVAPLASQFTQLNSGNLTTGTTVVTQNSQIIYREMVHSIDGKPYISNIPHVLNTHENMGQSGSLYQNLMVVDPFGNTSCIYSTPQSILPKTCNSPIFSNSLSHIPTSIDKSIPNIVNDVSKTLIMEVSPIQHQMSSKTEVMAMQQVEETMVSNCTPGQTESDTVHRALEPESDSKNSTSVSTKGLKILSNIKVEVPVQHNKNMINTIMDLTGPGDSGYIQCPRSPENILPDLKEKPQRTSDIDNRCQPSNDSNVKLTPHNFSVIKNVGNPQSCKDFSKLNSAQEDNESCDSNPVPDLICNEKPSISPCSDLLENSLDQCSQPSKHDHSPESKKEIFSSDQRLKMEVAANQAHSETDDSKTSKSLATLPVVQSLTNILVENDDFLSKQKSHPLRLNNIFVKKHKKLTIKNFKPLRFDSDPQPSSSASKSEQYFNLNIEKVEKDHEDGIQPETSVQKIEVLENEKEFDADTEEQSMDIEPTAPSMISHSNGYSTSIDLVIKEEVNSNNEFSNEADRSGRDLATLESLRPINVITYGNMGAADFDDDSNHRELLDLETASKNKQFVNMMNDNYFGDNIYADYFTPDRVESFDSEKGSNVGKDREVYNIWGEPSQKENEFVLPNFIHESYKIAESNMEYDIGENQNIDHIGHAERDSKADVLQETREEEPPLNICADERMPPRGELSGQESNGDMESSWSGMYPEVTAAEPYDLMARESWVSDGSDVDDNHKTENLEEPSTKGRLHTCAQCGLKFPTLKELRSHCNASYSHSRIARCIKREEKPDVPSLAETLIFETKDAVATSIMPEFDPLAETKPELILIKQKKKRNNFVCITCNVDQGGPDAFNEHLKVHPLECYTCGKFFYRRANLVLHTKTHLGIKNYKCEVCGKRFVTRQKLGEHRNTHTGQAPVKCTLCDQTFRRYSNMVQHRDRHHLKKKAKVRDFVCRCGALFHSRAKLLWHQETHEEKPKACPYCGDKFVHAASLTRHVRRSHNHLYVARRSGRDENVPCPVCKQVYLRSNLRAHLHTHSGKRPFVCVSCDKAFTTKWNLKLHRWTHASRSSKPYKCTLCKGAFFRQSEYAAHVNAHRSVRPYTCKHCGRQFIRKYNCQRHVREHETAKRYACEVPDCGKTFHRSYYLTEHMRVHSGARPFACNICGKTSTNKSNHNKHVKIHHSREPYASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01204282;
- 90% Identity
- iTF_01203459; iTF_01202673; iTF_01205940; iTF_01204282; iTF_01206782;
- 80% Identity
- -