Pmad004406.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pieris macdunnoughii
Gene Symbol
zfy1
Assembly
GCA_905332375.1
Location
CAJOBZ010000008.1:309335-318043[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 2.3 1.4e+02 3.1 0.3 2 23 6 27 5 27 0.95
2 13 0.048 2.9 8.4 2.1 1 19 1017 1035 1017 1037 0.97
3 13 4.1e-05 0.0025 18.1 1.1 2 23 1127 1148 1126 1148 0.97
4 13 1.4e-05 0.00084 19.6 1.1 1 23 1154 1176 1154 1176 0.99
5 13 0.00048 0.03 14.7 3.3 2 23 1183 1204 1182 1205 0.95
6 13 0.19 12 6.5 1.0 6 23 1219 1236 1217 1236 0.97
7 13 0.00015 0.0092 16.3 0.5 3 23 1243 1264 1242 1264 0.97
8 13 0.0046 0.28 11.6 0.5 2 23 1280 1300 1279 1300 0.96
9 13 0.00025 0.015 15.6 0.7 1 20 1306 1325 1306 1328 0.91
10 13 0.0028 0.17 12.3 0.3 1 23 1336 1358 1336 1358 0.97
11 13 0.00084 0.051 13.9 7.3 1 23 1364 1386 1364 1386 0.98
12 13 1.4e-06 8.5e-05 22.7 0.8 1 23 1392 1416 1392 1416 0.95
13 13 0.00096 0.059 13.7 4.4 1 23 1422 1444 1422 1445 0.95

Sequence Information

Coding Sequence
ATGGATGAGAAAGTTCAGTGTCCAGTTTGTACACTTTATCTTCACAATGGGATGTCGTTAGAGACTCATTTGGATACGCATCCTAAAGATCAagttattaaagctttatgtTGTTTATCTTCCAAAGGCAATGCAAGTGGTAGTAGAACGCCCACACCATCAATTTCTGAACATTCTTATAGAAGTAGAACACCGGTGACAGATGATAGTGTTAGATGGTCAACATCACGCCGCAGTGCTGAAAGCACTTATTGGAGAAGAACACCTAGCAGAAATAAGTCATTGTCATCATGTAATTCTAGAAATGACACTCCAGAAGCCAGAATGAATGTTACCAACTTTGACAGCAATGCTGTTAACCCTTGTTCTGAATTTTCAAATTGCTCTGTGAAATCTTCTAAGACATCCCAGTCATATCTGCCAAGTGTGCCAACAATACAATCAAACTATAGTCAGCAATATCCATTCTACAGTGAGCCAACTGAAGACCCAGAAATAAAGTATTCTCGCAGCTCTGATTACAATGTGGCTGAAAATCCAAATCAGCTGTTTGTTTATAATGTTCCAGTACTAACATCAAATGTAAAAGTTTCCACTTCTCCTACATTACCAATACCTTCAACATCTAAAAAACAGAGTGATTATGTAAAAATTCTTCCAAAACAAAACATGGTCTTAAAAAATGCTGCTAGGCTTGGTTACATTGCTCCAGGGATCAAGCCATATCCTGTTATGATGTCCACATCGCCAACTTATATGCAAAAAAATGTTCAAGCTAATATGATGGTTACGGGAAGTGGGCCTGTGTCTGGAATATTAGATACTAAAACAGCTGTGGCTCCATTAGCAAGTCAGTTCACTCAACTTAATTCAGGCAATTTAACAACTGGGACAACTGTAGTCACTCAAAattcacaaattatttatCGGGAGATGGTGCATAGTATTGATGGAAAACCTTATATCTCAAATATACCTCATGTTCTTAATACACATGAAAATATGGGGCAGAGTGGCTCGTTGTATCAAAACCTTATGGTGGTTGACCCCTTCGGTAACACTTCATGTATTTATAGTACGCCTCAATCTATTTTACCCAAGACTTGTAACTCTCCAATATTCAGCAATAGTTTGTCACATATACCAACATCTATTGACAAGTCTATACCTAATATTGTAAATGATGTTAGTAAAACGTTGATAATGGAGGTCAGCCCAATTCAGCATCAAATGTCATCTAAAACTGAGGTGATGGCTATGCAACAAGTGGAGGAGACCATGGATAGTAACTGTACTCCAGGACAGACAGAAAGTGATACTGTACATAGAGCATTAGAACCAGAGTCTGATTCTAAAAATTCAACATCCGTTTCTACAAAGGGACTAAAAATTCTGAGCAATATTAAGGTGGAAGTTCCTGTACAGCACAATAAGAACATGATCAATACTATAATGGACCTAACCGGTCCAGGAGACTCTGGGTACATTCAATGTCCCCGATCACCTAAGAATATTCTCCCAGATTTAAAGGAGAAACCTCAGCGTACATCAGATATTGATAATCGCTGTCAGCCCTCTAATGAGAGTAATGTAAAATTGACACCGCATAACTTTTcagttataaaaaatgttggcAACCCACAGTCCTGTAAAGACTTTCCTAAGTTAAATAGTGCTCAGGAGGACAATGAATCATGCGATAGCAATCCAGTTCCTGACCTTATATGTAACGAAAAGCCATCAATATCACCATGCAGTGACTTATTAGAAAACTCCATGGACCAGTGTTCACAACCCTCAAAACATGACCATTCTCCcgaatacaaaaaagaaatattttctagTGATCAGAGATTAAAAATGGATGCAAATCAGGCACATTCGGAAACAGATAATTCAAAAACTTCTAAATCCTTAGCAACACTTCCAGTTGTCCAAGCCTTGACAAACATAGTTGTTGAAAATGATGATCTTCATTCTAAACAGAAGAGCCATCCCCTAAgattaaatactatatttgtcaaaaaacataaaaagctaacaataaaaaattttaagccATTAAGGTTTGATTCAGACCCACAACCTTCGTCATCCACAAGTAAATCTGAACAATACTTTAATCTGAATATTGAGAAGGTAGAAAAGGATCATGAGGATGGAATTCAGCCTGAAACTTCTGTTCAGAAAATTGAAGTCTTAGAAAATGAGAAAGAATTCGATGCTGATACAGAAGAGCAATCAATGGATATTGAGCCGACTGCGCCATCAATGATCAGTCACTCCAATGGCTATTCAACTTCCATTGACTTGGTAATCAAGGAGGAAGTGAATTCCAACAATGAGTTCAGCAACGAAGCCGATAGGTCCGGACGTGACCTAGCCACCCTCGAGTCTTTACGTCCGATCAATGTGATCACTTATGGCAATATGGGTGCAGCAGATTTCGACGACGATTCCAACCACAGAGAGCTTCTGGACTTAGAGACGGCTTCTAAAAACAAGCAATTTGTCAATATGATGAATGATAACTATTTCGGTGATAATATTTACGCTGATTATTTTACACCTGATCGCGTAGAGAGTTTCGATTCAGAGAAAGGATCCAATGTGGGTAAGGATAGGGAAGTGTATAATATTTGGGGAGAGCCGTCACAAAAGGAGAACGAGTTTGTCTTACCAAATTTTATTCACGAAAGTTATAAAATTGCTGAAAGTAATATGGAATATGACATTGGggaaaatcaaaatatagaTCACATAGGTCACGCAGAACGGGATAGTAAGGCTGACGTTTTACAAGAGACGAGGGAAGAGGAACCGCCGCTGAATATTTGCGCAGACGAGCGGATGCCCCCCCGAGGGGAACTCAGTGGACAAGAGAGCAATGGCGACATGGAGTCATCGTGGAGCGGGATGTACCCGGGGGTGACGGCCGCGGAACCTTACGACCTGATGGCTCGCGAGAGTTGGGTCTCCGACGGTTCGGACGTCGACGACAACCACAAGACGGAAAACTTAGAGGAACCGTCGACGAAAGGGCGACTCCACACGTGCGCCCAGTGCGGCCTCAAGTTCCCGACGCTGAAGGAGTTGCGATCTCATTGCAACGCCTCCTACTCCCACAGCCGCATCGCCCGCTGCATTAAGAGAGAGGAAAAACCCGACGTGCCTTCGTTAGCCGAAACTCTCATATTCGAAACCAAAGACGCGGTGGCCACCTCCATCATGCCGGAATTCGATCCGCTGGCCGAGACCAAGCCGGAGCTGATCCTGATAAAGCAGAAGAAGAAAAGGAACAACTTCGTGTGCATCACCTGCAACGTGGACCAGGGCGGGCCCGACGCCTTCAACGAGCACCTCAAGGTCCACCCGCTGGAGTGCTACACGTGCGGCAAGTTCTTCTACCGGCGAGCCAACCTGGTGTTGCACACGAAGACGCACCTCGGCATCAAAAATTACAAGTGCGAGGTGTGCGGCAAGCGCTTCGTGACGCGGCAGAAGCTGGGCGAGCACCGCAACACGCACACGGGGCAGGCGCCCGTCAAGTGCACGCTGTGCGACCAGACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGGGACCGACACCACCTAAAGAAGAAGGCCAAGGTGCGCGACTTCGTGTGCCGCTGCGGCGCAGTGTTCCACTCGCGGGCCAAGCTGCTGTGGCACCAGGAGACGCACGAGGAGCGGCCCAAGGCCTGCCCGTACTGCGGAGACAAGTTCGTGCACGCGGCGTCGCTCACACGCCACGTGCGGCGCTCGCACAACCACCTGTACGTGGCGAGGCGCTCGGGCCGCGACGAGAACGTGCCGTGCCCCGTGTGCAAGCAGGTGTACCTGCGCTCCAACCTGCGTGCGCACCTGCACACGCACAGCGGCAAGCGGCCCTTCGTCTGCGTCAGTTGCGACAAGGCCTTCACCACCAAGTGGAACCTGAAGCTGCACCGCTGGACGCACGCCAGCCGCTCGGCCAAGCCCTACAAGTGCACGCTGTGCAAGGGCGCCTTCTTCCGCCAGAGCGAGTACGCGGCGCACGTGAACGCGCATCGCTCGGTGCGGCCCTACACGTGCAAGCACTGCGGCCGCCAGTTCATCCGCAAGTACAACTGCCAGCGGCACGTGCGGGAGCACGAGACGGCCAAGCGCTACGCCTGCGAGGTGCCCGACTGCGGCAAGACCTTCCACCGCAGCTACTACCTCACGGAGCACATGCGCGTGCACAGCGGCGCCCGCCCCTTCGCCTGTAACATCTGCGGCAAGACTTCCACCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACTCGCGAGAGCCCTACGCCACCGAGGCCTAG
Protein Sequence
MDEKVQCPVCTLYLHNGMSLETHLDTHPKDQVIKALCCLSSKGNASGSRTPTPSISEHSYRSRTPVTDDSVRWSTSRRSAESTYWRRTPSRNKSLSSCNSRNDTPEARMNVTNFDSNAVNPCSEFSNCSVKSSKTSQSYLPSVPTIQSNYSQQYPFYSEPTEDPEIKYSRSSDYNVAENPNQLFVYNVPVLTSNVKVSTSPTLPIPSTSKKQSDYVKILPKQNMVLKNAARLGYIAPGIKPYPVMMSTSPTYMQKNVQANMMVTGSGPVSGILDTKTAVAPLASQFTQLNSGNLTTGTTVVTQNSQIIYREMVHSIDGKPYISNIPHVLNTHENMGQSGSLYQNLMVVDPFGNTSCIYSTPQSILPKTCNSPIFSNSLSHIPTSIDKSIPNIVNDVSKTLIMEVSPIQHQMSSKTEVMAMQQVEETMDSNCTPGQTESDTVHRALEPESDSKNSTSVSTKGLKILSNIKVEVPVQHNKNMINTIMDLTGPGDSGYIQCPRSPKNILPDLKEKPQRTSDIDNRCQPSNESNVKLTPHNFSVIKNVGNPQSCKDFPKLNSAQEDNESCDSNPVPDLICNEKPSISPCSDLLENSMDQCSQPSKHDHSPEYKKEIFSSDQRLKMDANQAHSETDNSKTSKSLATLPVVQALTNIVVENDDLHSKQKSHPLRLNTIFVKKHKKLTIKNFKPLRFDSDPQPSSSTSKSEQYFNLNIEKVEKDHEDGIQPETSVQKIEVLENEKEFDADTEEQSMDIEPTAPSMISHSNGYSTSIDLVIKEEVNSNNEFSNEADRSGRDLATLESLRPINVITYGNMGAADFDDDSNHRELLDLETASKNKQFVNMMNDNYFGDNIYADYFTPDRVESFDSEKGSNVGKDREVYNIWGEPSQKENEFVLPNFIHESYKIAESNMEYDIGENQNIDHIGHAERDSKADVLQETREEEPPLNICADERMPPRGELSGQESNGDMESSWSGMYPGVTAAEPYDLMARESWVSDGSDVDDNHKTENLEEPSTKGRLHTCAQCGLKFPTLKELRSHCNASYSHSRIARCIKREEKPDVPSLAETLIFETKDAVATSIMPEFDPLAETKPELILIKQKKKRNNFVCITCNVDQGGPDAFNEHLKVHPLECYTCGKFFYRRANLVLHTKTHLGIKNYKCEVCGKRFVTRQKLGEHRNTHTGQAPVKCTLCDQTFRRYSNMVQHRDRHHLKKKAKVRDFVCRCGAVFHSRAKLLWHQETHEERPKACPYCGDKFVHAASLTRHVRRSHNHLYVARRSGRDENVPCPVCKQVYLRSNLRAHLHTHSGKRPFVCVSCDKAFTTKWNLKLHRWTHASRSAKPYKCTLCKGAFFRQSEYAAHVNAHRSVRPYTCKHCGRQFIRKYNCQRHVREHETAKRYACEVPDCGKTFHRSYYLTEHMRVHSGARPFACNICGKTSTNKSNHNKHVKIHHSREPYATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01204282;
90% Identity
iTF_01205140;
80% Identity
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