Basic Information

Insect: Pieris macdunnoughii
Gene Symbol: lolal
Assembly: GCA_905332375.1
Location: CAJOBZ010000001.1:8823447-8826105[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.5e-16 6.4e-13 48.1 0.0 3 42 328 368 327 371 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.5e-16	6.4e-13	48.1	0.0	3	42	328	368	327	371	0.94

Sequence Information

Coding Sequence: ATGTCACAACAATACAGTTTGCGGTGGAATAACCATCAACCTAactttatttcaatgtttacAACACTTCtgaatacaaaaacattagTAGATGTTACCCTGGCAGCAGAAGGGCAGCACTTACAGGCTCATAAAGTGGTTCTTTCAGCGTGTAGTACATATTTTcagGCGCTGTTTGTAGATAACCCATCACGCCATCCTATTGTCATTCTAAAAGATGTTACATTTTCCAATCTTCGTACAATGGTAGACTTCATGTACTATGGTGAAGTTAATGTTACTGAGGAACAGTTGCCCcagGTCCTTGACACAGCCAAAGTCCTAAAAATCAAAGGTTTGACAGAAATGCCAGACTCTACTTCTCTGACAAGGCAGAACATGACTTCGGAATTTCAATCATCTGGTGAAGTTGAGTCACTCAGACCTTCAGCATCCCCTTCATCATCACCCTACAATAAAAAACGACGtCGCAGAAAGAGTTCCACGGGGTCAATAGGAGTAGGAAGTCTAGTGCTTGATGACACTAAGCATGAAGATTTTGGGCAGAATTCACAAGATATTGTGCGTGCAGAAACCATTACATTGAGTAGTCTTCCGCAACAGAGACGCATGCGGGAATATGATGAAAGATTAGAAGTTATGGAATCtGCTGATGAACCACATAACCTGAATGTTGAGCCTATGACCATTGACGATTCAGTTGGTATTGCCCCAGGGGGACAGTGGAGCATGATTGAACATCCTTATCCACGGTACTCAAATGCCTGTATCGGAGGTGGAACCCTACAACCAGATCCGGGAATGTACATGAATAACGTAATGAACTCTCACACCGATCACGATATATCCGATTATGGCCAGAACTTGGGAGTAGCCGGTCCCTCTCCCGGCCCGAGTTGTGCCACTGAAGCCCCAACCGCTCACGAAATGCCAAATCTGACGCAACAGAAGAGGCGGCGCACGACCAATCCACAAGCGGCTGAGAACTTTCAACGTGCTTTGGAGGCAGTGCGGTTTGGTGGCATAGGGTTCTGTAAAGCTGCACGTTTATTTGGTGTGAATAACAGGACTTTGTGGTTAGAGTACAAAAAGAAGGGATATCCGAATAACAGGCCGAGTATCAAGAGTAGGATAAAGCGAGAACATTCATCACCGCCTTTACAAACGAAAGAAGAAATCCCCCAACAAGATCCACAAATGGCGTTGTTATGTCCGCCGCACCCGGTGCCTGTGGGCTTTATTGACCCACGGCCGTTAGACTTCCAGGTGCAAGTAAACAACCAGAACCTAAACGTAAACGTTAATTATCTGCAATAG
Protein Sequence: MSQQYSLRWNNHQPNFISMFTTLLNTKTLVDVTLAAEGQHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFSNLRTMVDFMYYGEVNVTEEQLPQVLDTAKVLKIKGLTEMPDSTSLTRQNMTSEFQSSGEVESLRPSASPSSSPYNKKRRRRKSSTGSIGVGSLVLDDTKHEDFGQNSQDIVRAETITLSSLPQQRRMREYDERLEVMESADEPHNLNVEPMTIDDSVGIAPGGQWSMIEHPYPRYSNACIGGGTLQPDPGMYMNNVMNSHTDHDISDYGQNLGVAGPSPGPSCATEAPTAHEMPNLTQQKRRRTTNPQAAENFQRALEAVRFGGIGFCKAARLFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHSSPPLQTKEEIPQQDPQMALLCPPHPVPVGFIDPRPLDFQVQVNNQNLNVNVNYLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01204810; iTF_01202578; iTF_01206482; iTF_01203351; iTF_01205015; iTF_01205815; iTF_01204186; iTF_01205627; iTF_01206684; iTF_01202398; iTF_01203968; iTF_01193701; iTF_00357348; iTF_00710124; iTF_00358447; iTF_00710326; iTF_01193529; iTF_00357755; iTF_00358748; iTF_00878797; iTF_00878950; iTF_00430772; iTF_00430568; iTF_00876076; iTF_00874375; iTF_00876303; iTF_00875440; iTF_00875226; iTF_00874587; iTF_00771186; iTF_00771024;
90% Identity: iTF_01204810; iTF_01202578; iTF_01206482; iTF_01203351; iTF_01205015; iTF_01205815; iTF_01204186; iTF_01205627; iTF_01206684; iTF_01202398; iTF_01203968;
80% Identity: iTF_01203351;