Hgla007513.1
Basic Information
- Insect
- Hebomoia glaucippe
- Gene Symbol
- lolal
- Assembly
- GCA_025727935.1
- Location
- JAOSYY010000008.1:2630202-2634045[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-16 7.1e-13 48.3 0.0 3 42 319 359 318 362 0.94
Sequence Information
- Coding Sequence
- ATGTCGCaacaatacagtttgcggtggaataatcaccaaccaaactttatttctatgtttacaacactcctaaacacaagaactttagttgatgtgacactggctgcagaaggtcaacaattacaagctcacaaagttgtgctttcggcttgcagcacatattttcaggccctgtttgtggataatccatcaagacatccgattgtcatcctgaaagatgttaccttttctaatttacgcactatggtagacttcatgtactatggtgaagtaaatgtcactgaagagcaattgccaCAGGTGCTCGATACAGCTAAATTGCTGAAAATTAAAGGTCTCACAGAGATGCCGGATTCCACCTCACTAACACGACAGAACACGTCATCTGAGTTTCAGTCATCAGCTGAATCTATTGAATCATTACGGCCCTCTTTATCACCGCGCAGAAAAAGTTCTTCAGGCTCGACCACGTTGGGTAACTTAGTTCACGATGAAGTCAAAAATGATGACTACGGACAAAATCCACAAGATATTGTTCGAGGAGAAACTGTCACTCTGAGCAGCCTACCGCAACAACGACGTATGCGGGAATATGAGGAGAGAATAGACGTTATACAACAGCCTGGAGATGTTCACAACATAAATGTAGACCAACTGCCAATAGACAACCCTGTAAGCCTTGCTCCAGGGGGACAGTGGAGCATGATTGAACATCCATATCCTCGTTACCCGAACGCCTGTATCAGTGGTGGAGCTTTGCAACCGGATCCAGGGATGTACATCAATAACGTTATGAACACTCACGCCGATCACGACCTGAACGACTATGGTCAAAATTTAGGAGTGGCTGGTCCTTCCCCGGGCCCAAGTTGCGCAACGGCAGCTCAGACACCCTATGATATATCGGCGGTTCCTCACACGAAACGACGACGCACAACTAATCCACAAGCAGCGGAAAACTTCCAAAGAGCGTTGGAGGCGGTTCGCATCGGCGGTATTGGCTTTTGTAAAGCCGCGCGCTTGTTCGGTGTAAACAATAGGACATTGTGGTTAGAATACAAAAAGAAAGGATATCCAAACAACAGGCCGAGTATCAAGAGCAGGATAAAGCGGGAGAATTCGTCGCCACCCCTGCAGACGAAAGAAGAAATGCCGCAGCAGGATCAGCACATGGCGTTGATATGCCCGCCACAACCTTTACCAGTCGGCTTTATAGATCCTCGTCCATTGGACTTCCAGGTGCAAGTGACCAACCCGAACAATAATGTAAACGTAAATTATATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTRTLVDVTLAAEGQQLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFSNLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRQNTSSEFQSSAESIESLRPSLSPRRKSSSGSTTLGNLVHDEVKNDDYGQNPQDIVRGETVTLSSLPQQRRMREYEERIDVIQQPGDVHNINVDQLPIDNPVSLAPGGQWSMIEHPYPRYPNACISGGALQPDPGMYINNVMNTHADHDLNDYGQNLGVAGPSPGPSCATAAQTPYDISAVPHTKRRRTTNPQAAENFQRALEAVRIGGIGFCKAARLFGVNNRTLWLEYKKKGYPNNRPSIKSRIKRENSSPPLQTKEEMPQQDQHMALICPPQPLPVGFIDPRPLDFQVQVTNPNNNVNVNYMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01203175;
- 90% Identity
- iTF_00771186;
- 80% Identity
- iTF_00771186;