Ehec018840.1
Basic Information
- Insect
- Eurema hecabe
- Gene Symbol
- lolal
- Assembly
- GCA_026213755.1
- Location
- JADANM010005835.1:5408422-5410945[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-15 8.6e-13 48.2 0.0 3 42 331 371 330 374 0.94
Sequence Information
- Coding Sequence
- ATGTCACAGCAATACAGTTTGCGGTGGAATAATCACCAACCAAACTTTATATCAATGTTTACTACACTCCTTAATACCAAGACCCTTGTTGATGTGACTTTGGCTGCTGAGGGACAACACTTACAAGCCCATAAAGTTGTACTATCAGCTTGTAGTACTTACTTTCAGGCGCTCTTTGTGGACAATCCTTCCCGGCACCCAATAGTAATTTTGAAAGATGTATCTTTTTCTGATTTACGGACAATGGTTGATTTTATGTATTATGGTGAAGTGAATGTTACTGAAGAGCAGTTGCCCCAAGTTCTGGATACTGCAAAGTTATTAAAAATCAAAGGCCTGACGGAGATGCCAGATTCCACATCACTCACACGTCAGAATACATCATCAGATTTTCAGTCTCCTGGAGAGTCTATGGAATCACATAGACCTTCAGCTTCACCATCATCATCACCATGTAACAGAAGAAGAAGACGTCGAAAAAGCTCATCAGGATCTACTAACTTAGGAAACCTGGTTCATGATGAAGTTAAAAATGATGATTATGGTCAAAACTCGCACGACATTGTACGTGGTGACACCATTACTCTTAGCAGTCTTCCTCAACAGCGACGCATGAGGGAATATGAAGAAAGAATGGATGTTATACAACAGCCTGGAGATGCCCACAATCTAAATGTTGAACCCATGACAATGGATAATAATGCAGTTGGCCTAGCGCAAGGAGGACAATGGAGTATGTTGGAGCACACTTACCCGCGATATCCGAATGCCGCTTGTATCGGCGGCGGCGCTCTGCAACCAGACCCGGGAATGTATATCAACAACGTCATCAACCCACATGCAGATCACGATTTGAATGATTATGGCCAAAATTTAGGGGTAACTGGCCCCTCGCCGGGCCCTAGTTGCGCGGCGGAAGCGCAAACAACGCACGACGTATCGGCTCAAAATCAACCAAAACGGCGGCGCACCACCAACCCTCAAGCGGCGGAAAATTTTCAGAGAGCATTAGAAGCAGTTCGCATAGGAGGCATTGGATTCTGTAAAGCGGCGCGTTTATTCGGCGTGAACAACAGGACTTTGTGGCTCGAGTACAAGAAGAAAGGCTACCCAAACAATCGACCGAGCATAAAGAGCAGGATCAAGCGCGAGCACTCGTCGCCGCCCATTGAGACGAAGGAAGAGATGCAACCACAGGAGCAGCAGATGGCGTTGATATGCCCGCCGCACCCTGTGCCGGTGAGCTTCATAGACCCGCGCCCGCTGGATTTCCAAGTGCAAGTGAACAACCCGACGTTGAACGTGAACGTGAACTATCAGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTKTLVDVTLAAEGQHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVSFSDLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRQNTSSDFQSPGESMESHRPSASPSSSPCNRRRRRRKSSSGSTNLGNLVHDEVKNDDYGQNSHDIVRGDTITLSSLPQQRRMREYEERMDVIQQPGDAHNLNVEPMTMDNNAVGLAQGGQWSMLEHTYPRYPNAACIGGGALQPDPGMYINNVINPHADHDLNDYGQNLGVTGPSPGPSCAAEAQTTHDVSAQNQPKRRRTTNPQAAENFQRALEAVRIGGIGFCKAARLFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHSSPPIETKEEMQPQEQQMALICPPHPVPVSFIDPRPLDFQVQVNNPTLNVNVNYQMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01203175;
- 90% Identity
- iTF_01193701;
- 80% Identity
- iTF_00710326;