Patr065095.1
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- retn
- Assembly
- GCA_944567605.1
- Location
- CALYMX010001225.1:394575-398021[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-20 7e-16 61.2 0.0 17 89 6 76 2 76 0.95
Sequence Information
- Coding Sequence
- ATGAAGGACTGGTCAGGTACTCCTATTAATAGATTGCCAATAATGGCTAAATCTGTGCTGGATCTCTATGAATTGTACAATTTAGTCATTGCCAGGGGGGGTTTGGTGGATGTTATTAACAAGAAGCTGTGGCAGGAAATTATTAAAGGATTGCATCTACCGTCTTCCATCACATCTGCTGCCTTCACACTGCGCACACAGTATATGAAATATCTATACCCGTACGAATGTGAGAAGCGGCGTTTGAGCACTCCAGCCGAACTGCAAGCAGCAATCGACGGCAACCGAAGAGAAGGACGTCGAAGCAGCTACGGCCAGTACGAATCCGTTCAACGCTCTCCAAATCCTTCCCAAATGTCCCCATTGTCCTTGGTCTCCCAGCAGCAACACATCGCTGCTCGTATGAATTCCGTAATGAGCGGCGGCATAGGTCTCCATAACGGCGCCCACCACCCCAGCCATCCCACCCCCTTGGGACAACCGCTGAACACAGGCCCTCTTCCAGGACTTGCGCCGAACGAATTTGAAGCAAGGATGTTAGAATACGTTAAACTACTTAACAAAGAAATTAGGAGCTCGGCGTCGACGCCGCCCAGACACGGAGATTCGTCGCCTCCGAACATTACCTCCCCACTAAACTCGCTGGAGATGTCGAGGATGACGCTTTGGAATTTGTACAATAATAACCAACCACAAGTCGAACCACAGAAGGAAGCACTAAATCTTTCAGATAATTCCCCGCCAGTTGTCAAAAGAGAACCTGAATTAAGAGATTCACCGCCTCCAGCTAAGAAATTTATTAAAGATGAGCAGGATCAACCTAAAATTCAATCTCCCAGTACTCACATTAAAATCAACAGTCGAGGCGATTCGCGCACAGGTGATAATTCCTTAGTAGTTAGTATGGAGTTAAATGGGGTAACATACCAAGGAGTCCTTTTCGCACAGACTGGAAGGACAGCAATCGCGTCATAA
- Protein Sequence
- MKDWSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYESVQRSPNPSQMSPLSLVSQQQHIAARMNSVMSGGIGLHNGAHHPSHPTPLGQPLNTGPLPGLAPNEFEARMLEYVKLLNKEIRSSASTPPRHGDSSPPNITSPLNSLEMSRMTLWNLYNNNQPQVEPQKEALNLSDNSPPVVKREPELRDSPPPAKKFIKDEQDQPKIQSPSTHIKINSRGDSRTGDNSLVVSMELNGVTYQGVLFAQTGRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01184290;
- 90% Identity
- iTF_00369358; iTF_00920445; iTF_01184290; iTF_01185963; iTF_01400147;
- 80% Identity
- -