Cven001063.1
Basic Information
- Insect
- Coproporus ventriculus
- Gene Symbol
- retn
- Assembly
- GCA_027574865.2
- Location
- JAODAH020002470.1:1-2240[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-19 8.5e-16 58.5 0.0 18 89 1 70 1 70 0.94
Sequence Information
- Coding Sequence
- ACTCCAATTAATCGATTACCCATCATGGCAAAATCAGTATTAGATCTCTATGAATTGTACAATTTGGTGATTGCAAGAGGTGGATTAGTGGATGTGATCAATAAGAAATTGTGGCAGGAAATAATCAAAGGGTTACATCTGCCATCTTCAATAACATCAGCGGCGTTCACACTTCGGACACAatacatgaaatatttatacccaTATGAATGTGATAAAAGGCGGTTGAGTACCCCAGCTGAACTCCAAGCAGCTATCGATGGTAATCGAAGAGAAGGTCGAAGAAGTAGCTACGGCCAATACGAATCCATACAAAGATCTCCTAATCCAACACAAATGTCCCCCCTCAGTTTAGTATCTCAACAACAACACATCGCAGCCAGGATGAATTCTGTAATGAGCGGCGGGATCGGTTTACACAACGGCGCCCATCATCCCAGTCATCCAACTCCAATGGGTCAACCTTTAAACACAGGTCCTCTGCCGGGTCTTGCACCTAGCGAATTCGAAGCTAGAATGATAGAATAtgttaagttattaaataaagaaattagaagTTCAGCTTCGACGCCGCCCAGACAGGGAGATTCCTCACCTCCCAGTGCCACATCACCATTAAATCCCTTAGAAATGTCAAGGATGACATTatggaatttatataataataatcagcACCCCGTCGAACCGCAAAAGGAAGCTCTAAACCTTTCCGATTCAACACTACCACCTCTAAAAAGGGAACCAGAATTAAGAGAATCATCACCACCAGCTAAGAAGTTCAtaaaagatgaagaagaaCAACATAAATCGGACTCACCTACAAGTACACACATTAAAATCAACAGTCGAgGTGATTCTCGCACTGGTGATAATTCCTTAGTAGTCAGTATGGAACTAAATGGTGTCACATATCAAGGAGTTTTATTTGCACAGACACCGTCTAACAACCGAACTGCGATTACATcgtaa
- Protein Sequence
- TPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKRRLSTPAELQAAIDGNRREGRRSSYGQYESIQRSPNPTQMSPLSLVSQQQHIAARMNSVMSGGIGLHNGAHHPSHPTPMGQPLNTGPLPGLAPSEFEARMIEYVKLLNKEIRSSASTPPRQGDSSPPSATSPLNPLEMSRMTLWNLYNNNQHPVEPQKEALNLSDSTLPPLKREPELRESSPPAKKFIKDEEEQHKSDSPTSTHIKINSRGDSRTGDNSLVVSMELNGVTYQGVLFAQTPSNNRTAITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_01196490;
- 80% Identity
- -