Pspi019506.1
Basic Information
- Insect
- Philonthus spinipes
- Gene Symbol
- retn
- Assembly
- GCA_963082785.1
- Location
- OY720307.1:28337074-28346511[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-20 3.7e-16 60.6 0.0 17 89 8 78 5 78 0.95
Sequence Information
- Coding Sequence
- ATGTGGAACGTGCTCGGCGTAGGAACGCCGATCAATCGTCTGCCGATCATGGCCAAATCCGTGCTGGACCTCTACGAGCTGTATAATTTGGTCATCGCCAGGGGAGGTTTGGTGGATGTGATCAATAAGAAGTTGTGGCAGGAGATTATCAAGGGATTGCATTTACCATCGAGTATCACATCGGCGGCTTTCACGCTACGGACACAatatatgaaatatttatatccatatgaATGCGAGAAAAGGCGGCTCAGCACACCAGCAGAACTACAAGCAGCGATTGACGGCAACAGAAGAGAAGGTCGCCGCAGCAGCTACGGGCAATACGACTCAGTACAAAGATCTCCGAACCCAGCACAAATGTCCCCACTATCCTTGGTCTCTCAGCAGCAGCACATCGCGGCGCGGATGAACAGCGTGATGAGCGGCGGCATCAGCCTCCACAACGGCGCCCACCACCCCAGCCACCCGGCCCCCATGGGCCAACCCTTAAACACAGGCCCCTTGCCCGGCTTGGCACCGAGCGAATTCGAAGCCAGGATGATGGAGTACGTGAAGCTGCTCAACAAGGAGATGAGGAGTTCGGCCTCGACGCCGCCCAGACACGGGGATTCCTCACCGCCGAGCGCCACCTCCCCGCTGAACCCTCTGGAGATGTCGCGGATGACGCTGTGGAACTTGTACAACAACAACCAGCCCCAGGTGGAGCCGCAGAAGGAGGCGCTGAACCTCTCGGAGAACTCACCGCCGGCGGTCAAGCGCGAATCCGAGTTGAGGGAATCGCCGCCCCCCGCCAAGAAGTTCGTCACAGAGGAGGATGATAAACCCAAAGCACAAACACCTTCAACTCACATTAAAATCAACAGTCGAGGCGATTCTCGCACCGGTGATAATTCCCTAGTTGTAAGTATGGAACTAAACGGCGTGACCTACCAGGGCGTCCTTTTCCCGCAAACAACGTCGTCGTCGGGACGGACCGCGATCACGTCGTAA
- Protein Sequence
- MWNVLGVGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSVQRSPNPAQMSPLSLVSQQQHIAARMNSVMSGGISLHNGAHHPSHPAPMGQPLNTGPLPGLAPSEFEARMMEYVKLLNKEMRSSASTPPRHGDSSPPSATSPLNPLEMSRMTLWNLYNNNQPQVEPQKEALNLSENSPPAVKRESELRESPPPAKKFVTEEDDKPKAQTPSTHIKINSRGDSRTGDNSLVVSMELNGVTYQGVLFPQTTSSSGRTAITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01184290;
- 90% Identity
- iTF_01196490;
- 80% Identity
- -